RNA–Protein interactions for RNA: ENST00000025008.9

RB1CC1-201, Transcript of RB1 inducible coiled-coil 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RB1CC1, Length 6,635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-201ENST00000025008 MAST4O15021 2626 aa9.63□□□□□ -0.87
RB1CC1-201ENST00000025008 Q6ZR54 194 aa9.61□□□□□ -0.87
RB1CC1-201ENST00000025008 KRTAP29-1A8MX34 341 aaPredicted RBP9.59□□□□□ -0.87
RB1CC1-201ENST00000025008 S4R3F8 94 aa9.59□□□□□ -0.87
RB1CC1-201ENST00000025008 ITPR3Q14573 2671 aa9.59□□□□□ -0.87
RB1CC1-201ENST00000025008 RPL37P61927 97 aaKnown RBP9.58□□□□□ -0.88
RB1CC1-201ENST00000025008 ROMO1P60602 79 aa9.57□□□□□ -0.88
RB1CC1-201ENST00000025008 KRTAP4-16G5E9R7 235 aaPredicted RBP9.54□□□□□ -0.88
RB1CC1-201ENST00000025008 H1FX-AS1Q4G0G2 97 aa9.51□□□□□ -0.89
RB1CC1-201ENST00000025008 AKAP13Q12802 2813 aa9.49□□□□□ -0.89
RB1CC1-201ENST00000025008 SPATA8Q6RVD6 105 aa9.47□□□□□ -0.89
RB1CC1-201ENST00000025008 DNAH12Q6ZR08 3092 aa9.47□□□□□ -0.89
RB1CC1-201ENST00000025008 KRTAP1-5Q9BYS1 174 aa9.46□□□□□ -0.9
RB1CC1-201ENST00000025008 R4GN34 69 aa9.46□□□□□ -0.9
RB1CC1-201ENST00000025008 GOLGB1Q14789 3259 aaKnown RBP9.45□□□□□ -0.9
RB1CC1-201ENST00000025008 STAB1Q9NY15 2570 aa9.44□□□□□ -0.9
RB1CC1-201ENST00000025008 A6NN06 94 aa9.44□□□□□ -0.9
RB1CC1-201ENST00000025008 NBEAL1Q6ZS30 2694 aa9.42□□□□□ -0.9
RB1CC1-201ENST00000025008 FLG2Q5D862 2391 aaPredicted RBP9.42□□□□□ -0.9
RB1CC1-201ENST00000025008 LCE6AA0A183 80 aa9.42□□□□□ -0.9
RB1CC1-201ENST00000025008 CHD6Q8TD26 2715 aa9.41□□□□□ -0.9
RB1CC1-201ENST00000025008 CENPEQ02224 2701 aa9.37□□□□□ -0.91
RB1CC1-201ENST00000025008 UNC79Q9P2D8 2635 aa9.37□□□□□ -0.91
RB1CC1-201ENST00000025008 HELZ2Q9BYK8 2649 aaKnown RBP9.36□□□□□ -0.91
RB1CC1-201ENST00000025008 GCN1Q92616 2671 aaKnown RBP9.33□□□□□ -0.92
RB1CC1-201ENST00000025008 CFAP46Q8IYW2 2715 aa9.3□□□□□ -0.92
RB1CC1-201ENST00000025008 CEP350Q5VT06 3117 aa9.3□□□□□ -0.92
RB1CC1-201ENST00000025008 DMBT1Q9UGM3 2413 aaPredicted RBP9.3□□□□□ -0.92
RB1CC1-201ENST00000025008 NOTCH1P46531 2555 aa9.29□□□□□ -0.92
RB1CC1-201ENST00000025008 KRTAP25-1Q3LHN0 102 aa9.28□□□□□ -0.92
RB1CC1-201ENST00000025008 M0QZ58 72 aa9.27□□□□□ -0.92
RB1CC1-201ENST00000025008 A0A087X002 238 aa9.25□□□□□ -0.93
RB1CC1-201ENST00000025008 NOTCH2NLQ7Z3S9 236 aa9.25□□□□□ -0.93
RB1CC1-201ENST00000025008 KRTAP16-1A8MUX0 517 aa9.25□□□□□ -0.93
RB1CC1-201ENST00000025008 PANO1I0J062 215 aa9.24□□□□□ -0.93
RB1CC1-201ENST00000025008 CHD7Q9P2D1 2997 aa9.23□□□□□ -0.93
RB1CC1-201ENST00000025008 SEC61BP60468 96 aaKnown RBP9.22□□□□□ -0.93
RB1CC1-201ENST00000025008 KRTAP10-1P60331 282 aa9.21□□□□□ -0.94
RB1CC1-201ENST00000025008 Q5VSD8 79 aa9.2□□□□□ -0.94
RB1CC1-201ENST00000025008 ADM2Q7Z4H4 148 aa9.18□□□□□ -0.94
RB1CC1-201ENST00000025008 PLAC4Q8WY50 150 aa9.18□□□□□ -0.94
RB1CC1-201ENST00000025008 TEX15Q9BXT5 2789 aa9.16□□□□□ -0.94
RB1CC1-201ENST00000025008 KRTAP10-2P60368 255 aa9.16□□□□□ -0.94
RB1CC1-201ENST00000025008 A0A0C4DFX4 3053 aa9.16□□□□□ -0.94
RB1CC1-201ENST00000025008 TEP1Q99973 2627 aaKnown RBP9.14□□□□□ -0.95
RB1CC1-201ENST00000025008 A8MU10 97 aa9.14□□□□□ -0.95
RB1CC1-201ENST00000025008 C5orf42Q9H799 3197 aa9.12□□□□□ -0.95
RB1CC1-201ENST00000025008 CFAP54Q96N23 3096 aa9.11□□□□□ -0.95
RB1CC1-201ENST00000025008 COL6A5A8TX70 2615 aa9.1□□□□□ -0.95
RB1CC1-201ENST00000025008 KRTAP11-1Q8IUC1 163 aa9.09□□□□□ -0.95
RB1CC1-201ENST00000025008 KRTAP7-1Q8IUC3 87 aa9.09□□□□□ -0.95
RB1CC1-201ENST00000025008 CHD9Q3L8U1 2897 aa9.09□□□□□ -0.95
RB1CC1-201ENST00000025008 STAB2Q8WWQ8 2551 aa9.08□□□□□ -0.96
RB1CC1-201ENST00000025008 NBEAL2Q6ZNJ1 2754 aa9.08□□□□□ -0.96
RB1CC1-201ENST00000025008 RPS29P62273 56 aaKnown RBP9.07□□□□□ -0.96
RB1CC1-201ENST00000025008 NDUFAF8A1L188 74 aa9.02□□□□□ -0.97
RB1CC1-201ENST00000025008 KRTAP13-1Q8IUC0 172 aa9.01□□□□□ -0.97
RB1CC1-201ENST00000025008 MGAQ8IWI9 3026 aa9.01□□□□□ -0.97
RB1CC1-201ENST00000025008 ZNF292O60281 2723 aa8.96□□□□□ -0.97
RB1CC1-201ENST00000025008 Q6ZRN7 208 aaPredicted RBP8.95□□□□□ -0.98
RB1CC1-201ENST00000025008 SETXQ7Z333 2677 aaKnown RBP8.95□□□□□ -0.98
RB1CC1-201ENST00000025008 KRTAP13-2Q52LG2 175 aa8.91□□□□□ -0.98
RB1CC1-201ENST00000025008 UBR5O95071 2799 aaPredicted RBP8.9□□□□□ -0.98
RB1CC1-201ENST00000025008 PCNTO95613 3336 aa8.9□□□□□ -0.98
RB1CC1-201ENST00000025008 A8MUU9 505 aa8.9□□□□□ -0.99
RB1CC1-201ENST00000025008 BAHCC1Q9P281 2608 aa8.88□□□□□ -0.99
RB1CC1-201ENST00000025008 TRANK1O15050 2925 aa8.86□□□□□ -0.99
RB1CC1-201ENST00000025008 MAP1AP78559 2803 aaPredicted RBP8.84□□□□□ -0.99
RB1CC1-201ENST00000025008 NSD1Q96L73 2696 aaPredicted RBP8.84□□□□□ -0.99
RB1CC1-201ENST00000025008 C20orf166-AS1Q96NR2 134 aa8.82□□□□□ -1
RB1CC1-201ENST00000025008 UTRNP46939 3433 aa8.82□□□□□ -1
RB1CC1-201ENST00000025008 HTTP42858 3142 aa8.76□□□□□ -1.01
RB1CC1-201ENST00000025008 FRYQ5TBA9 3013 aa8.74□□□□□ -1.01
RB1CC1-201ENST00000025008 ITPR1Q14643 2758 aa8.73□□□□□ -1.01
RB1CC1-201ENST00000025008 RANBP2P49792 3224 aaKnown RBP8.73□□□□□ -1.01
RB1CC1-201ENST00000025008 LAMA2P24043 3122 aaKnown RBP8.72□□□□□ -1.01
RB1CC1-201ENST00000025008 WDFY4Q6ZS81 3184 aa8.71□□□□□ -1.02
RB1CC1-201ENST00000025008 IGSF10Q6WRI0 2623 aa8.69□□□□□ -1.02
RB1CC1-201ENST00000025008 DSPP15924 2871 aaKnown RBP8.68□□□□□ -1.02
RB1CC1-201ENST00000025008 TNP1P09430 55 aa8.67□□□□□ -1.02
RB1CC1-201ENST00000025008 PP632Q6XCG6 107 aa8.62□□□□□ -1.03
RB1CC1-201ENST00000025008 TRIOO75962 3097 aa8.62□□□□□ -1.03
RB1CC1-201ENST00000025008 ITPR2Q14571 2701 aa8.61□□□□□ -1.03
RB1CC1-201ENST00000025008 C10orf95Q9H7T3 257 aa8.61□□□□□ -1.03
RB1CC1-201ENST00000025008 APCP25054 2843 aa8.61□□□□□ -1.03
RB1CC1-201ENST00000025008 H0YAA0 97 aa8.59□□□□□ -1.03
RB1CC1-201ENST00000025008 KALRNO60229 2985 aa8.58□□□□□ -1.04
RB1CC1-201ENST00000025008 FREM2Q5SZK8 3169 aa8.54□□□□□ -1.04
RB1CC1-201ENST00000025008 MKI67P46013 3256 aaKnown RBP8.52□□□□□ -1.05
RB1CC1-201ENST00000025008 P0C880 135 aa8.51□□□□□ -1.05
RB1CC1-201ENST00000025008 VPS13AQ96RL7 3174 aa8.51□□□□□ -1.05
RB1CC1-201ENST00000025008 UTP20O75691 2785 aaKnown RBP8.5□□□□□ -1.05
RB1CC1-201ENST00000025008 LAMA3Q16787 3333 aa8.48□□□□□ -1.05
RB1CC1-201ENST00000025008 ASH1LQ9NR48 2969 aaKnown RBP8.48□□□□□ -1.05
RB1CC1-201ENST00000025008 NIPBLQ6KC79 2804 aaeCLIP8.47□□□□□ -1.051e-5■□□□□ 11.1
RB1CC1-201ENST00000025008 NBEAQ8NFP9 2946 aa8.47□□□□□ -1.05
RB1CC1-201ENST00000025008 PRUNE2Q8WUY3 3088 aa8.46□□□□□ -1.05
RB1CC1-201ENST00000025008 KMT2BQ9UMN6 2715 aaPredicted RBP8.45□□□□□ -1.06
RB1CC1-201ENST00000025008 KRTAP1-4P0C5Y4 121 aa8.44□□□□□ -1.06
RB1CC1-201ENST00000025008 HIVEP1P15822 2718 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms