RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 Q6ZR54 194 aa6.37□□□□□ -1.39
NIPAL3-201ENST00000003912 LINC01600Q96MT4 127 aa6.36□□□□□ -1.39
NIPAL3-201ENST00000003912 LAMA2P24043 3122 aaKnown RBP6.35□□□□□ -1.39
NIPAL3-201ENST00000003912 TRIOO75962 3097 aa6.35□□□□□ -1.39
NIPAL3-201ENST00000003912 SPRR1BP22528 89 aa6.34□□□□□ -1.39
NIPAL3-201ENST00000003912 KLKP1Q107X0 134 aa6.34□□□□□ -1.39
NIPAL3-201ENST00000003912 CDH23Q9H251 3354 aa6.34□□□□□ -1.4
NIPAL3-201ENST00000003912 Q8NDZ9 215 aa6.33□□□□□ -1.4
NIPAL3-201ENST00000003912 XIRP2A4UGR9 3374 aa6.33□□□□□ -1.4
NIPAL3-201ENST00000003912 UBR5O95071 2799 aaPredicted RBP6.31□□□□□ -1.4
NIPAL3-201ENST00000003912 ITPR2Q14571 2701 aa6.31□□□□□ -1.4
NIPAL3-201ENST00000003912 Q8N1X5 172 aa6.31□□□□□ -1.4
NIPAL3-201ENST00000003912 H7BZZ5 65 aa6.3□□□□□ -1.4
NIPAL3-201ENST00000003912 UQCR11O14957 56 aa6.3□□□□□ -1.4
NIPAL3-201ENST00000003912 A8MUN3 132 aa6.3□□□□□ -1.4
NIPAL3-201ENST00000003912 CYP4F30PQ9H0H9 118 aa6.29□□□□□ -1.4
NIPAL3-201ENST00000003912 FLNCQ14315 2725 aa6.28□□□□□ -1.4
NIPAL3-201ENST00000003912 MAP1AP78559 2803 aaPredicted RBP6.27□□□□□ -1.41
NIPAL3-201ENST00000003912 SPANXA2-OT1Q8N9U9 137 aa6.27□□□□□ -1.41
NIPAL3-201ENST00000003912 M0R2T5 61 aa6.27□□□□□ -1.41
NIPAL3-201ENST00000003912 VPS13AQ96RL7 3174 aa6.26□□□□□ -1.41
NIPAL3-201ENST00000003912 SEC61BP60468 96 aaKnown RBP6.26□□□□□ -1.41
NIPAL3-201ENST00000003912 KTN1-AS1Q86SY8 53 aa6.26□□□□□ -1.41
NIPAL3-201ENST00000003912 ZCCHC13Q8WW36 166 aaKnown RBP6.25□□□□□ -1.41
NIPAL3-201ENST00000003912 TNRC18O15417 2968 aaPredicted RBP6.25□□□□□ -1.41
NIPAL3-201ENST00000003912 NBEAL1Q6ZS30 2694 aa6.25□□□□□ -1.41
NIPAL3-201ENST00000003912 SZT2Q5T011 3432 aa6.24□□□□□ -1.41
NIPAL3-201ENST00000003912 ITPR1Q14643 2758 aa6.24□□□□□ -1.41
NIPAL3-201ENST00000003912 NSD1Q96L73 2696 aaPredicted RBP6.23□□□□□ -1.41
NIPAL3-201ENST00000003912 LINC00483Q53H64 154 aa6.22□□□□□ -1.41
NIPAL3-201ENST00000003912 MMP24-AS1A0A0U1RRL7 71 aa6.22□□□□□ -1.41
NIPAL3-201ENST00000003912 PANO1I0J062 215 aa6.21□□□□□ -1.41
NIPAL3-201ENST00000003912 OCR1Q9BZK8 76 aa6.21□□□□□ -1.41
NIPAL3-201ENST00000003912 MIR22HGQ0VDD5 57 aa6.21□□□□□ -1.42
NIPAL3-201ENST00000003912 LINC01554Q52M75 96 aa6.21□□□□□ -1.42
NIPAL3-201ENST00000003912 HIVEP1P15822 2718 aa6.21□□□□□ -1.42
NIPAL3-201ENST00000003912 OXTP01178 125 aa6.2□□□□□ -1.42
NIPAL3-201ENST00000003912 LINC00472Q9H8W2 130 aa6.2□□□□□ -1.42
NIPAL3-201ENST00000003912 FP248Q71RG6 208 aaPredicted RBP6.2□□□□□ -1.42
NIPAL3-201ENST00000003912 Q6ZRN7 208 aaPredicted RBP6.19□□□□□ -1.42
NIPAL3-201ENST00000003912 LCA10Q71F78 164 aa6.19□□□□□ -1.42
NIPAL3-201ENST00000003912 KMT2BQ9UMN6 2715 aaPredicted RBP6.19□□□□□ -1.42
NIPAL3-201ENST00000003912 ATMQ13315 3056 aa6.18□□□□□ -1.42
NIPAL3-201ENST00000003912 FRYLO94915 3013 aa6.18□□□□□ -1.42
NIPAL3-201ENST00000003912 FRYQ5TBA9 3013 aa6.18□□□□□ -1.42
NIPAL3-201ENST00000003912 HRES1P13985 223 aa6.17□□□□□ -1.42
NIPAL3-201ENST00000003912 Q5XG85 94 aa6.17□□□□□ -1.42
NIPAL3-201ENST00000003912 NBEAL2Q6ZNJ1 2754 aa6.17□□□□□ -1.42
NIPAL3-201ENST00000003912 COL12A1Q99715 3063 aa6.16□□□□□ -1.42
NIPAL3-201ENST00000003912 CSAG1Q6PB30 78 aa6.15□□□□□ -1.42
NIPAL3-201ENST00000003912 KRTAP4-16G5E9R7 235 aaPredicted RBP6.15□□□□□ -1.42
NIPAL3-201ENST00000003912 SPINK7P58062 85 aa6.14□□□□□ -1.43
NIPAL3-201ENST00000003912 SPINT4Q6UDR6 99 aa6.14□□□□□ -1.43
NIPAL3-201ENST00000003912 UTP20O75691 2785 aaKnown RBP6.13□□□□□ -1.43
NIPAL3-201ENST00000003912 CRIPTQ9P021 101 aa6.13□□□□□ -1.43
NIPAL3-201ENST00000003912 DMXL2Q8TDJ6 3036 aa6.13□□□□□ -1.43
NIPAL3-201ENST00000003912 A0A0D9SG42 100 aa6.13□□□□□ -1.43
NIPAL3-201ENST00000003912 COL6A3P12111 3177 aa6.12□□□□□ -1.43
NIPAL3-201ENST00000003912 S4R3F8 94 aa6.12□□□□□ -1.43
NIPAL3-201ENST00000003912 Q1T7F1 81 aa6.12□□□□□ -1.43
NIPAL3-201ENST00000003912 Q5W150 140 aa6.12□□□□□ -1.43
NIPAL3-201ENST00000003912 TACC2O95359 2948 aa6.1□□□□□ -1.43
NIPAL3-201ENST00000003912 Q8N9P0 234 aaPredicted RBP6.1□□□□□ -1.43
NIPAL3-201ENST00000003912 APCP25054 2843 aa6.1□□□□□ -1.43
NIPAL3-201ENST00000003912 LAMA1P25391 3075 aa6.1□□□□□ -1.43
NIPAL3-201ENST00000003912 A0A087X002 238 aa6.1□□□□□ -1.43
NIPAL3-201ENST00000003912 CDC42SE1Q9NRR8 79 aa6.09□□□□□ -1.43
NIPAL3-201ENST00000003912 EYSQ5T1H1 3165 aa6.09□□□□□ -1.44
NIPAL3-201ENST00000003912 STAB2Q8WWQ8 2551 aa6.07□□□□□ -1.44
NIPAL3-201ENST00000003912 CYSTM1Q9H1C7 97 aa6.06□□□□□ -1.44
NIPAL3-201ENST00000003912 RPS29P62273 56 aaKnown RBP6.06□□□□□ -1.44
NIPAL3-201ENST00000003912 CAMK2N1Q7Z7J9 78 aa6.06□□□□□ -1.44
NIPAL3-201ENST00000003912 TENM4Q6N022 2769 aa6.05□□□□□ -1.44
NIPAL3-201ENST00000003912 CELSR3Q9NYQ7 3312 aa6.05□□□□□ -1.44
NIPAL3-201ENST00000003912 VCANP13611 3396 aa6.04□□□□□ -1.44
NIPAL3-201ENST00000003912 A0A1B0GU33 70 aa6.04□□□□□ -1.44
NIPAL3-201ENST00000003912 BOD1L1Q8NFC6 3051 aa6.03□□□□□ -1.44
NIPAL3-201ENST00000003912 REV3LO60673 3130 aa6.02□□□□□ -1.45
NIPAL3-201ENST00000003912 KRTAP11-1Q8IUC1 163 aa6.02□□□□□ -1.45
NIPAL3-201ENST00000003912 ADGRG4Q8IZF6 3080 aa6.01□□□□□ -1.45
NIPAL3-201ENST00000003912 NBEAQ8NFP9 2946 aa6□□□□□ -1.45
NIPAL3-201ENST00000003912 ASB16-AS1Q495Z4 193 aa6□□□□□ -1.45
NIPAL3-201ENST00000003912 LRBAP50851 2863 aa5.99□□□□□ -1.45
NIPAL3-201ENST00000003912 KRTAP7-1Q8IUC3 87 aa5.98□□□□□ -1.45
NIPAL3-201ENST00000003912 Q75L30 129 aa5.98□□□□□ -1.45
NIPAL3-201ENST00000003912 R4GN34 69 aa5.97□□□□□ -1.45
NIPAL3-201ENST00000003912 H3BS24 57 aa5.97□□□□□ -1.45
NIPAL3-201ENST00000003912 KALRNO60229 2985 aa5.97□□□□□ -1.45
NIPAL3-201ENST00000003912 NIPBLQ6KC79 2804 aaeCLIP5.96□□□□□ -1.45
NIPAL3-201ENST00000003912 ZZEF1O43149 2961 aa5.96□□□□□ -1.46
NIPAL3-201ENST00000003912 DMAC1Q96GE9 116 aa5.96□□□□□ -1.46
NIPAL3-201ENST00000003912 DMXL1Q9Y485 3027 aa5.96□□□□□ -1.46
NIPAL3-201ENST00000003912 KRTAP13-1Q8IUC0 172 aa5.95□□□□□ -1.46
NIPAL3-201ENST00000003912 SPTBN5Q9NRC6 3674 aaKnown RBP5.94□□□□□ -1.46
NIPAL3-201ENST00000003912 KRTAP13-2Q52LG2 175 aa5.94□□□□□ -1.46
NIPAL3-201ENST00000003912 LINC01558Q9Y6Z2 57 aa5.92□□□□□ -1.46
NIPAL3-201ENST00000003912 DNAH14Q0VDD8 3507 aa5.92□□□□□ -1.46
NIPAL3-201ENST00000003912 DMBT1Q9UGM3 2413 aaPredicted RBP5.92□□□□□ -1.46
NIPAL3-201ENST00000003912 CRYBG3Q68DQ2 2970 aa5.92□□□□□ -1.46
NIPAL3-201ENST00000003912 KRTAP29-1A8MX34 341 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms