RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Foxf2O54743 446 aa14.3□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Prr3Q811B5 190 aaKnown RBP14.29□□□□□ -0.12
Pcf11-201ENSMUST00000119954 LenepQ9WVB6 61 aa14.29□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Ighv1-36A0A0A6YXT2 117 aa14.29□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Gm2174F6ZVF2 133 aa14.29□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Tal2Q62282 108 aa14.29□□□□□ -0.12
Pcf11-201ENSMUST00000119954 C1qtnf5Q8K479 243 aa14.29□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Fxyd1Q9Z239 92 aa14.29□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Igkv4-61A0A0G2JH00 117 aa14.29□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Wisp1O54775 367 aa14.29□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Gm10912Q3UXH0 145 aa14.29□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Mapk1ip1lQ8BH93 242 aa14.29□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Zfp951A0A087WRH0 451 aa14.28□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Gm7075D3Z497 112 aa14.28□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Myo5aQ99104 1853 aaKnown RBP14.28□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Cabin1G3X8Q1 2187 aaKnown RBP14.28□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Rnf183Q8QZS5 190 aa14.28□□□□□ -0.12
Pcf11-201ENSMUST00000119954 E130218I03RikA0A0U1RNU5 63 aa14.28□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Gm9513B3GLJ6 99 aa14.28□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Ccl21aP84444 133 aa14.28□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Ccl21bP86792 133 aa14.28□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Ccl21cP86793 133 aa14.28□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Gm20379A0A087WR34 119 aa14.28□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Zfp11P10751 647 aa14.28□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Inafm2A0A1L1STD6 152 aa14.27□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Luzp4B1AV09 449 aa14.27□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Gm15127B1AVZ5 449 aa14.27□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Gm15107B1B0X0 449 aa14.27□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Wnt2P21552 360 aa14.27□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Gm15085Q62012 449 aa14.27□□□□□ -0.12
Pcf11-201ENSMUST00000119954 PifoQ9D9W1 207 aa14.27□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Trav7-1A0A0G2JEV5 112 aa14.27□□□□□ -0.12
Pcf11-201ENSMUST00000119954 CrygbP04344 175 aa14.27□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Rpp25lQ99JH1 163 aa14.27□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Gm5294J3QP53 216 aa14.27□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Pde6hP61249 83 aa14.27□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Igkv4-54A0A0G2JES9 117 aa14.27□□□□□ -0.13
Pcf11-201ENSMUST00000119954 ArtnQ9Z0L2 224 aa14.27□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Rbm3O89086 153 aaKnown RBP14.27□□□□□ -0.13
Pcf11-201ENSMUST00000119954 P01638 115 aa14.27□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Tex26Q0VB26 296 aa14.27□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Taf15Q8BQ46 557 aaKnown RBP14.27□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Gm5105Q8C6Y9 112 aa14.27□□□□□ -0.13
Pcf11-201ENSMUST00000119954 9430097D07RikQ8BS47 195 aa14.26□□□□□ -0.13
Pcf11-201ENSMUST00000119954 SprnQ8BWU1 147 aa14.26□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Foxi1Q922I5 372 aa14.26□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Col11a2Q64739 1736 aa14.26□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Igkv4-72A0A0B4J1I4 117 aa14.26□□□□□ -0.13
Pcf11-201ENSMUST00000119954 P01657 111 aa14.26□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Tnfrsf26P83626 204 aa14.26□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Tnks1bp1P58871 1720 aa14.26□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Trav6d-7A0A075B6B0 112 aa14.26□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Igkv4-63A0A0G2JFU6 117 aa14.26□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Wipf2Q6PEV3 440 aa14.26□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Ss18l2Q9D174 77 aa14.26□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Tmem200bD3Z0P8 284 aa14.25□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Tmem30bQ8BHG3 353 aa14.25□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Tmem52Q9D702 196 aa14.25□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Gdf15Q9Z0J7 303 aa14.25□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Igkv4-80A0A075B5L7 116 aa14.25□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Spata46Q4FZF2 204 aa14.25□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Vmo1Q5SXG7 201 aa14.25□□□□□ -0.13
Pcf11-201ENSMUST00000119954 C330021F23RikQ8C7T0 141 aa14.25□□□□□ -0.13
Pcf11-201ENSMUST00000119954 RhohQ9D3G9 191 aa14.25□□□□□ -0.13
Pcf11-201ENSMUST00000119954 CrygsO35486 178 aa14.25□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Igh-VJ558P01758 117 aa14.25□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Trav9-1A0A075B601 112 aa14.25□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Ypel3P61237 119 aa14.25□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Qrich2A0A140LIY9 2337 aa14.25□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Znf260Q62513 407 aa14.25□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Ighv8-2A0A0A6YW58 119 aa14.24□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Atp23Q9CWQ3 201 aa14.24□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Plxnb2B2RXS4 1842 aa14.24□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Igkv14-126A0A075B5K0 117 aa14.24□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Ckap5A2AGT5 2032 aaKnown RBP14.24□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Clec4b2Q67DU8 208 aa14.24□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Folr2Q05685 251 aa14.24□□□□□ -0.13
Pcf11-201ENSMUST00000119954 BC048502Q80Y74 154 aa14.24□□□□□ -0.13
Pcf11-201ENSMUST00000119954 4930442H23RikQ9D5G7 103 aa14.24□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Pmaip1Q9JM54 103 aa14.24□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Cep290Q6A078 2472 aa14.23□□□□□ -0.13
Pcf11-201ENSMUST00000119954 A0A1Y7VLU2 103 aa14.23□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Myod1P10085 318 aa14.23□□□□□ -0.13
Pcf11-201ENSMUST00000119954 CtsbP10605 339 aa14.23□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Igkv6-13A0A0G2JGY3 119 aa14.23□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Runx1Q03347 451 aa14.23□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Spink10Q8CAC8 162 aa14.23□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Tmem190Q9D2E9 166 aa14.23□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Wt1P22561 449 aa14.23□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Pip4p2Q9CZX7 257 aa14.23□□□□□ -0.13
Pcf11-201ENSMUST00000119954 P01726 129 aa14.22□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Rasl10aQ8K5A4 203 aa14.22□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Lypd8Q9D7S0 255 aa14.22□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Ndufa11Q9D8B4 141 aa14.22□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Ighv1-58A0A075B5W9 117 aa14.22□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Igkv19-93A0A0G2JFZ3 115 aa14.22□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Wdr86D3Z757 380 aa14.22□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Prdm6Q3UZD5 596 aa14.22□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Ang6Q5GAN0 147 aa14.22□□□□□ -0.13
Pcf11-201ENSMUST00000119954 Msrb2Q78J03 175 aa14.22□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 108.8 ms