RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 COMMD3Q9UBI1 195 aa0.82□□□□□ -2.28
ATM-230ENST00000640388 J3QR89 54 aa0.81□□□□□ -2.28
ATM-230ENST00000640388 M0R2P5 195 aa0.81□□□□□ -2.28
ATM-230ENST00000640388 M0R2Z0 102 aa0.81□□□□□ -2.28
ATM-230ENST00000640388 CDC42EP2O14613 210 aa0.81□□□□□ -2.28
ATM-230ENST00000640388 ADCYAP1P18509 176 aa0.81□□□□□ -2.28
ATM-230ENST00000640388 NCS1P62166 190 aa0.81□□□□□ -2.28
ATM-230ENST00000640388 COX6A2Q02221 97 aa0.81□□□□□ -2.28
ATM-230ENST00000640388 ATP11AUNQ6ZP68 121 aa0.81□□□□□ -2.28
ATM-230ENST00000640388 CTAGE3PQ8IX95 158 aa0.81□□□□□ -2.28
ATM-230ENST00000640388 ATOH7Q8N100 152 aa0.81□□□□□ -2.28
ATM-230ENST00000640388 SMIM3Q9BZL3 60 aa0.81□□□□□ -2.28
ATM-230ENST00000640388 TIMM8BQ9Y5J9 83 aaPredicted RBP0.81□□□□□ -2.28
ATM-230ENST00000640388 TRBV20-1A0A075B6N2 111 aa0.8□□□□□ -2.28
ATM-230ENST00000640388 A0A096LNI7 61 aa0.8□□□□□ -2.28
ATM-230ENST00000640388 LOC107984156A0A0G2JMH3 177 aa0.8□□□□□ -2.28
ATM-230ENST00000640388 NDUFA4O00483 81 aa0.8□□□□□ -2.28
ATM-230ENST00000640388 LINC00694P0DN24 101 aa0.8□□□□□ -2.28
ATM-230ENST00000640388 CCDC58Q4VC31 144 aa0.8□□□□□ -2.28
ATM-230ENST00000640388 Q5VV11 94 aa0.8□□□□□ -2.28
ATM-230ENST00000640388 LINC00575Q6W349 94 aa0.8□□□□□ -2.28
ATM-230ENST00000640388 IDO2Q6ZQW0 420 aa0.8□□□□□ -2.28
ATM-230ENST00000640388 ARL17AQ8IVW1 177 aa0.8□□□□□ -2.28
ATM-230ENST00000640388 PPDPFLQ8WWR9 84 aa0.8□□□□□ -2.28
ATM-230ENST00000640388 TAS2R8Q9NYW2 309 aa0.8□□□□□ -2.28
ATM-230ENST00000640388 UBE2D4Q9Y2X8 147 aa0.8□□□□□ -2.28
ATM-230ENST00000640388 EFCAB10A6NFE3 127 aa0.79□□□□□ -2.28
ATM-230ENST00000640388 RHOHQ15669 191 aa0.79□□□□□ -2.28
ATM-230ENST00000640388 DMAC1Q96GE9 116 aa0.79□□□□□ -2.28
ATM-230ENST00000640388 LIMD2Q9BT23 127 aa0.79□□□□□ -2.28
ATM-230ENST00000640388 SAR1AQ9NR31 198 aa0.79□□□□□ -2.28
ATM-230ENST00000640388 ERG28Q9UKR5 140 aa0.79□□□□□ -2.28
ATM-230ENST00000640388 LSM2Q9Y333 95 aaKnown RBP0.79□□□□□ -2.28
ATM-230ENST00000640388 TRBV7-1A0A0A6YYK4 115 aa0.78□□□□□ -2.28
ATM-230ENST00000640388 TMEM30CPA0ZSE6 113 aa0.78□□□□□ -2.28
ATM-230ENST00000640388 C20orf202A1L168 122 aa0.78□□□□□ -2.28
ATM-230ENST00000640388 TPST1O60507 370 aa0.78□□□□□ -2.28
ATM-230ENST00000640388 RPS25P62851 125 aaKnown RBP0.78□□□□□ -2.28
ATM-230ENST00000640388 OCIAD2Q56VL3 154 aa0.78□□□□□ -2.28
ATM-230ENST00000640388 CLLU1Q5K131 121 aa0.78□□□□□ -2.28
ATM-230ENST00000640388 CSAG1Q6PB30 78 aa0.78□□□□□ -2.28
ATM-230ENST00000640388 SLC25A26Q70HW3 274 aa0.78□□□□□ -2.28
ATM-230ENST00000640388 TTC9CQ8N5M4 171 aa0.78□□□□□ -2.28
ATM-230ENST00000640388 C1orf54Q8WWF1 131 aa0.78□□□□□ -2.28
ATM-230ENST00000640388 SPTSSAQ969W0 71 aa0.78□□□□□ -2.28
ATM-230ENST00000640388 TSC22D3Q99576 134 aa0.78□□□□□ -2.28
ATM-230ENST00000640388 VPS25Q9BRG1 176 aa0.78□□□□□ -2.28
ATM-230ENST00000640388 MRPL35Q9NZE8 188 aaKnown RBP0.78□□□□□ -2.28
ATM-230ENST00000640388 TRAV23DV6A0A075B6W5 121 aa0.77□□□□□ -2.29
ATM-230ENST00000640388 FAM236AA0A1B0GUQ0 79 aa0.77□□□□□ -2.29
ATM-230ENST00000640388 FAM236BA0A1B0GV22 79 aa0.77□□□□□ -2.29
ATM-230ENST00000640388 ZNF670-ZNF695F2Z2N8 137 aa0.77□□□□□ -2.29
ATM-230ENST00000640388 J3QLW9 94 aa0.77□□□□□ -2.29
ATM-230ENST00000640388 HMGN4O00479 90 aa0.77□□□□□ -2.29
ATM-230ENST00000640388 NCR3O14931 201 aa0.77□□□□□ -2.29
ATM-230ENST00000640388 SAA2P0DJI9 122 aaPredicted RBP0.77□□□□□ -2.29
ATM-230ENST00000640388 RPS27P42677 84 aaKnown RBP0.77□□□□□ -2.29
ATM-230ENST00000640388 SNX29P2Q8IUI4 249 aa0.77□□□□□ -2.29
ATM-230ENST00000640388 TMEM263Q8WUH6 116 aaKnown RBP0.77□□□□□ -2.29
ATM-230ENST00000640388 FAM107BQ9H098 131 aa0.77□□□□□ -2.29
ATM-230ENST00000640388 TMEM191AQ9H0A3 160 aa0.77□□□□□ -2.29
ATM-230ENST00000640388 RERGLQ9H628 205 aa0.77□□□□□ -2.29
ATM-230ENST00000640388 PRO0255Q9UI72 69 aa0.77□□□□□ -2.29
ATM-230ENST00000640388 TRBV10-1A0A0K0K1A3 114 aa0.76□□□□□ -2.29
ATM-230ENST00000640388 HIGD1CA8MV81 97 aa0.76□□□□□ -2.29
ATM-230ENST00000640388 CCDC179H3BU77 68 aa0.76□□□□□ -2.29
ATM-230ENST00000640388 K7ERU9 68 aa0.76□□□□□ -2.29
ATM-230ENST00000640388 HTN1P15515 57 aa0.76□□□□□ -2.29
ATM-230ENST00000640388 POLR2JP52435 117 aaKnown RBP0.76□□□□□ -2.29
ATM-230ENST00000640388 SELENOWP63302 87 aa0.76□□□□□ -2.29
ATM-230ENST00000640388 KLK9Q2XQG4 91 aa0.76□□□□□ -2.29
ATM-230ENST00000640388 KRTAP19-8Q3LI54 63 aa0.76□□□□□ -2.29
ATM-230ENST00000640388 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.75□□□□□ -2.29
ATM-230ENST00000640388 TRAV12-2A0A075B6T6 113 aa0.75□□□□□ -2.29
ATM-230ENST00000640388 FXYD4P59646 89 aa0.75□□□□□ -2.29
ATM-230ENST00000640388 SPINK13Q1W4C9 94 aa0.75□□□□□ -2.29
ATM-230ENST00000640388 XAF1Q6GPH4 301 aa0.75□□□□□ -2.29
ATM-230ENST00000640388 Q6ZQY7 126 aa0.75□□□□□ -2.29
ATM-230ENST00000640388 TMEM167AQ8TBQ9 72 aa0.75□□□□□ -2.29
ATM-230ENST00000640388 ATG5Q9H1Y0 275 aa0.75□□□□□ -2.29
ATM-230ENST00000640388 CCDC167Q9P0B6 97 aa0.75□□□□□ -2.29
ATM-230ENST00000640388 MRPL36Q9P0J6 103 aaKnown RBP0.75□□□□□ -2.29
ATM-230ENST00000640388 A0A1W2PPM0 123 aa0.74□□□□□ -2.29
ATM-230ENST00000640388 C9orf92A6NGG3 77 aa0.74□□□□□ -2.29
ATM-230ENST00000640388 A8MTW9 85 aa0.74□□□□□ -2.29
ATM-230ENST00000640388 PYYP10082 97 aa0.74□□□□□ -2.29
ATM-230ENST00000640388 RPL39P5Q59GN2 51 aa0.74□□□□□ -2.29
ATM-230ENST00000640388 LINC01545Q5VT33 79 aa0.74□□□□□ -2.29
ATM-230ENST00000640388 Q6ZUT4 128 aa0.74□□□□□ -2.29
ATM-230ENST00000640388 KRTAP19-3Q7Z4W3 81 aa0.74□□□□□ -2.29
ATM-230ENST00000640388 ARL11Q969Q4 196 aa0.74□□□□□ -2.29
ATM-230ENST00000640388 TEX49A0A1B0GTD5 131 aa0.73□□□□□ -2.29
ATM-230ENST00000640388 IGKCP01834 107 aa0.73□□□□□ -2.29
ATM-230ENST00000640388 IL7P13232 177 aa0.73□□□□□ -2.29
ATM-230ENST00000640388 RPL37P61927 97 aaKnown RBP0.73□□□□□ -2.29
ATM-230ENST00000640388 RRAS2P62070 204 aaPredicted RBP0.73□□□□□ -2.29
ATM-230ENST00000640388 EMX2Q04743 252 aa0.73□□□□□ -2.29
ATM-230ENST00000640388 TTTY10Q9BZA0 68 aa0.73□□□□□ -2.29
ATM-230ENST00000640388 TRGV1A0A0A0MS02 117 aa0.72□□□□□ -2.29
ATM-230ENST00000640388 TRBV30A0A0K0K1B3 111 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms