RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 ASH1LQ9NR48 2969 aaKnown RBP9.7□□□□□ -0.86
SCARB2-216ENST00000639300 IGLV5-52A0A0A0MRZ9 124 aa9.7□□□□□ -0.86
SCARB2-216ENST00000639300 IGHV6-1A0A0B4J1U7 121 aa9.69□□□□□ -0.86
SCARB2-216ENST00000639300 CXCL6P80162 114 aa9.69□□□□□ -0.86
SCARB2-216ENST00000639300 ST20-AS1Q8NBB2 130 aa9.68□□□□□ -0.86
SCARB2-216ENST00000639300 VPREB1P12018 145 aa9.67□□□□□ -0.86
SCARB2-216ENST00000639300 SERP1Q9Y6X1 66 aa9.67□□□□□ -0.86
SCARB2-216ENST00000639300 MDFIQ99750 246 aa9.66□□□□□ -0.86
SCARB2-216ENST00000639300 KRTAP1-1Q07627 177 aa9.65□□□□□ -0.86
SCARB2-216ENST00000639300 IGLV6-57P01721 117 aa9.65□□□□□ -0.86
SCARB2-216ENST00000639300 PCOTHQ58A44 107 aa9.65□□□□□ -0.86
SCARB2-216ENST00000639300 NSD1Q96L73 2696 aaPredicted RBP9.64□□□□□ -0.87
SCARB2-216ENST00000639300 Q6ZRX8 168 aa9.64□□□□□ -0.87
SCARB2-216ENST00000639300 GVQW2A0A096LPI5 108 aaPredicted RBP9.64□□□□□ -0.87
SCARB2-216ENST00000639300 FAM168BA1KXE4 195 aa9.64□□□□□ -0.87
SCARB2-216ENST00000639300 CHTF8P0CG12 524 aa9.64□□□□□ -0.87
SCARB2-216ENST00000639300 SMIM29Q86T20 159 aa9.64□□□□□ -0.87
SCARB2-216ENST00000639300 CRYGAP11844 174 aa9.63□□□□□ -0.87
SCARB2-216ENST00000639300 C1orf134Q5TEV5 83 aa9.63□□□□□ -0.87
SCARB2-216ENST00000639300 PHF5AQ7RTV0 110 aaKnown RBP9.63□□□□□ -0.87
SCARB2-216ENST00000639300 HCG22E2RYF7 251 aa9.63□□□□□ -0.87
SCARB2-216ENST00000639300 TRBV7-6A0A0J9YX20 115 aa9.63□□□□□ -0.87
SCARB2-216ENST00000639300 KRTAP10-11P60412 298 aa9.63□□□□□ -0.87
SCARB2-216ENST00000639300 LINC00612Q8N6U2 182 aa9.63□□□□□ -0.87
SCARB2-216ENST00000639300 PRR34Q9NV39 138 aa9.63□□□□□ -0.87
SCARB2-216ENST00000639300 USP34Q70CQ2 3546 aa9.61□□□□□ -0.87
SCARB2-216ENST00000639300 LOC110117498A0A087WWA1 95 aa9.61□□□□□ -0.87
SCARB2-216ENST00000639300 SERTAD4-AS1Q5TG53 156 aa9.61□□□□□ -0.87
SCARB2-216ENST00000639300 ITPR2Q14571 2701 aa9.61□□□□□ -0.87
SCARB2-216ENST00000639300 DNAH10OSP0CZ25 163 aa9.6□□□□□ -0.87
SCARB2-216ENST00000639300 Q8NBF4 154 aa9.6□□□□□ -0.87
SCARB2-216ENST00000639300 H0Y9P7 68 aa9.6□□□□□ -0.87
SCARB2-216ENST00000639300 C9orf129Q5T035 196 aaKnown RBP9.6□□□□□ -0.87
SCARB2-216ENST00000639300 A6NED7 52 aa9.6□□□□□ -0.87
SCARB2-216ENST00000639300 SEC61GP60059 68 aa9.6□□□□□ -0.87
SCARB2-216ENST00000639300 LINC00476Q8WZB0 136 aa9.6□□□□□ -0.87
SCARB2-216ENST00000639300 TM2D3Q9BRN9 247 aa9.58□□□□□ -0.88
SCARB2-216ENST00000639300 RETNLBQ9BQ08 111 aa9.58□□□□□ -0.88
SCARB2-216ENST00000639300 V9GYY9 64 aa9.58□□□□□ -0.88
SCARB2-216ENST00000639300 SVIPQ8NHG7 77 aa9.58□□□□□ -0.88
SCARB2-216ENST00000639300 FAM104AQ969W3 186 aa9.58□□□□□ -0.88
SCARB2-216ENST00000639300 ZANQ9Y493 2812 aa9.58□□□□□ -0.88
SCARB2-216ENST00000639300 NHLRC4P0CG21 123 aaPredicted RBP9.57□□□□□ -0.88
SCARB2-216ENST00000639300 UTP20O75691 2785 aaKnown RBP9.56□□□□□ -0.88
SCARB2-216ENST00000639300 PSPHP1O15172 72 aa9.56□□□□□ -0.88
SCARB2-216ENST00000639300 C15orf56Q8N910 161 aa9.56□□□□□ -0.88
SCARB2-216ENST00000639300 LINC00528Q8N1L1 170 aa9.55□□□□□ -0.88
SCARB2-216ENST00000639300 EPM2AB3EWF7 344 aa9.55□□□□□ -0.88
SCARB2-216ENST00000639300 MOBPQ13875 183 aa9.54□□□□□ -0.88
SCARB2-216ENST00000639300 BAHCC1Q9P281 2608 aa9.54□□□□□ -0.88
SCARB2-216ENST00000639300 CR1P17927 2039 aa9.54□□□□□ -0.88
SCARB2-216ENST00000639300 C16orf90A8MZG2 172 aa9.54□□□□□ -0.88
SCARB2-216ENST00000639300 NBDYA0A0U1RRE5 68 aa9.53□□□□□ -0.88
SCARB2-216ENST00000639300 K7EIL1 84 aa9.53□□□□□ -0.88
SCARB2-216ENST00000639300 MUC3AQ02505 3323 aa9.53□□□□□ -0.88
SCARB2-216ENST00000639300 C1orf64Q8NEQ6 169 aa9.51□□□□□ -0.89
SCARB2-216ENST00000639300 RPL37AP61513 92 aaKnown RBP9.51□□□□□ -0.89
SCARB2-216ENST00000639300 KCNQ1DNQ9H478 68 aa9.5□□□□□ -0.89
SCARB2-216ENST00000639300 PRR15LQ9BU68 103 aa9.49□□□□□ -0.89
SCARB2-216ENST00000639300 CELSR2Q9HCU4 2923 aa9.49□□□□□ -0.89
SCARB2-216ENST00000639300 A0A0G2JQZ4 141 aa9.49□□□□□ -0.89
SCARB2-216ENST00000639300 A0A1W2PNN7 141 aa9.49□□□□□ -0.89
SCARB2-216ENST00000639300 IGLV1-50A0A075B6I6 118 aa9.48□□□□□ -0.89
SCARB2-216ENST00000639300 BCE1O60756 84 aa9.48□□□□□ -0.89
SCARB2-216ENST00000639300 WDFY3Q8IZQ1 3526 aa9.48□□□□□ -0.89
SCARB2-216ENST00000639300 CASC10Q5T4H9 136 aa9.48□□□□□ -0.89
SCARB2-216ENST00000639300 Q8N377 158 aa9.46□□□□□ -0.89
SCARB2-216ENST00000639300 A0A1B0GW54 56 aa9.46□□□□□ -0.9
SCARB2-216ENST00000639300 TRBV7-4A0A0J9YYF1 115 aa9.45□□□□□ -0.9
SCARB2-216ENST00000639300 hDV103S1A0JD37 113 aa9.45□□□□□ -0.9
SCARB2-216ENST00000639300 RTL8CO15255 209 aa9.44□□□□□ -0.9
SCARB2-216ENST00000639300 K7EQZ3 153 aa9.43□□□□□ -0.9
SCARB2-216ENST00000639300 C4orf26Q17RF5 130 aa9.43□□□□□ -0.9
SCARB2-216ENST00000639300 STAB2Q8WWQ8 2551 aa9.43□□□□□ -0.9
SCARB2-216ENST00000639300 DCHS1Q96JQ0 3298 aa9.43□□□□□ -0.9
SCARB2-216ENST00000639300 RPS28P62857 69 aaKnown RBP9.41□□□□□ -0.9
SCARB2-216ENST00000639300 SPINK1P00995 79 aa9.41□□□□□ -0.9
SCARB2-216ENST00000639300 SPACA4Q8TDM5 124 aa9.41□□□□□ -0.9
SCARB2-216ENST00000639300 C1orf195Q5TG92 126 aa9.41□□□□□ -0.9
SCARB2-216ENST00000639300 CRYBG3Q68DQ2 2970 aa9.4□□□□□ -0.9
SCARB2-216ENST00000639300 NF1P21359 2839 aa9.39□□□□□ -0.91
SCARB2-216ENST00000639300 PMAIP1Q13794 54 aa9.39□□□□□ -0.91
SCARB2-216ENST00000639300 ERC2-IT1O76042 136 aa9.39□□□□□ -0.91
SCARB2-216ENST00000639300 IGKV2D-30A0A075B6S6 120 aa9.38□□□□□ -0.91
SCARB2-216ENST00000639300 IGKV2-30P06310 120 aa9.38□□□□□ -0.91
SCARB2-216ENST00000639300 IGFL1Q6UW32 110 aa9.38□□□□□ -0.91
SCARB2-216ENST00000639300 ASPMQ8IZT6 3477 aa9.37□□□□□ -0.91
SCARB2-216ENST00000639300 HIVEP1P15822 2718 aa9.36□□□□□ -0.91
SCARB2-216ENST00000639300 TRAV22A0A0B4J277 110 aa9.35□□□□□ -0.91
SCARB2-216ENST00000639300 RELNP78509 3460 aa9.33□□□□□ -0.92
SCARB2-216ENST00000639300 TLX1NBP0CAT3 122 aa9.32□□□□□ -0.92
SCARB2-216ENST00000639300 A0A1W2PNM2 257 aa9.32□□□□□ -0.92
SCARB2-216ENST00000639300 C9orf163Q8N9P6 203 aa9.32□□□□□ -0.92
SCARB2-216ENST00000639300 TP53AIP1Q9HCN2 124 aa9.32□□□□□ -0.92
SCARB2-216ENST00000639300 DCHS2Q6V1P9 2916 aa9.32□□□□□ -0.92
SCARB2-216ENST00000639300 FBN2P35556 2912 aa9.31□□□□□ -0.92
SCARB2-216ENST00000639300 APCP25054 2843 aa9.3□□□□□ -0.92
SCARB2-216ENST00000639300 Q8NDZ9 215 aa9.3□□□□□ -0.92
SCARB2-216ENST00000639300 LINC01600Q96MT4 127 aa9.3□□□□□ -0.92
SCARB2-216ENST00000639300 LIMD2Q9BT23 127 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms