RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 ERVK-7P63135 1459 aa0.05□□□□□ -2.4
ATM-228ENST00000639240 DOT1LQ8TEK3 1739 aa0.05□□□□□ -2.4
ATM-228ENST00000639240 CEBPZOSA8MTT3 80 aa0.05□□□□□ -2.4
ATM-228ENST00000639240 NDUFB1O75438 58 aa0.05□□□□□ -2.4
ATM-228ENST00000639240 RPL38P63173 70 aaKnown RBP0.05□□□□□ -2.4
ATM-228ENST00000639240 KLK9Q2XQG4 91 aa0.05□□□□□ -2.4
ATM-228ENST00000639240 H1FX-AS1Q4G0G2 97 aa0.05□□□□□ -2.4
ATM-228ENST00000639240 COX6B2Q6YFQ2 88 aa0.05□□□□□ -2.4
ATM-228ENST00000639240 NESP48681 1621 aa0.05□□□□□ -2.4
ATM-228ENST00000639240 TNRC6CQ9HCJ0 1690 aaKnown RBP0.05□□□□□ -2.4
ATM-228ENST00000639240 ARFGEF2Q9Y6D5 1785 aa0.04□□□□□ -2.4
ATM-228ENST00000639240 NWD1Q149M9 1564 aa0.04□□□□□ -2.4
ATM-228ENST00000639240 GAFA1Q96PS6 74 aa0.04□□□□□ -2.4
ATM-228ENST00000639240 PTPN23Q9H3S7 1636 aa0.04□□□□□ -2.4
ATM-228ENST00000639240 CHD8Q9HCK8 2581 aa0.03□□□□□ -2.4
ATM-228ENST00000639240 ABCC1P33527 1531 aa0.03□□□□□ -2.4
ATM-228ENST00000639240 TRAV21A0A0B4J279 112 aa0.03□□□□□ -2.4
ATM-228ENST00000639240 S100A13Q99584 98 aa0.03□□□□□ -2.4
ATM-228ENST00000639240 CNOT1A5YKK6 2376 aaKnown RBP0.03□□□□□ -2.41
ATM-228ENST00000639240 CFAP43Q8NDM7 1665 aa0.02□□□□□ -2.41
ATM-228ENST00000639240 BSNQ9UPA5 3926 aa0.02□□□□□ -2.41
ATM-228ENST00000639240 ST20Q9HBF5 79 aa0.02□□□□□ -2.41
ATM-228ENST00000639240 CDKN2A-AS1Q9UH64 79 aa0.02□□□□□ -2.41
ATM-228ENST00000639240 ALMS1Q8TCU4 4167 aa0.02□□□□□ -2.41
ATM-228ENST00000639240 DCHS2Q6V1P9 2916 aa0.02□□□□□ -2.41
ATM-228ENST00000639240 NCOA2Q15596 1464 aa0.02□□□□□ -2.41
ATM-228ENST00000639240 C4AP0C0L4 1744 aa0.01□□□□□ -2.41
ATM-228ENST00000639240 C4BP0C0L5 1744 aa0.01□□□□□ -2.41
ATM-228ENST00000639240 LPAP08519 4548 aa0.01□□□□□ -2.41
ATM-228ENST00000639240 LOC730098B7Z3J9 87 aa0.01□□□□□ -2.41
ATM-228ENST00000639240 M0R2T5 61 aa0.01□□□□□ -2.41
ATM-228ENST00000639240 ADIRFQ15847 76 aa0.01□□□□□ -2.41
ATM-228ENST00000639240 ATP5EP2Q5VTU8 51 aa0.01□□□□□ -2.41
ATM-228ENST00000639240 PRKDCP78527 4128 aaKnown RBP0.01□□□□□ -2.41
ATM-228ENST00000639240 WNK1Q9H4A3 2382 aa0.01□□□□□ -2.41
ATM-228ENST00000639240 SETXQ7Z333 2677 aaKnown RBP0□□□□□ -2.41
ATM-228ENST00000639240 FLNAP21333 2647 aaKnown RBP0□□□□□ -2.41
ATM-228ENST00000639240 SPRR2BP35325 72 aa0□□□□□ -2.41
ATM-228ENST00000639240 DEFB121Q5J5C9 76 aa0□□□□□ -2.41
ATM-228ENST00000639240 WFDC9Q8NEX5 89 aa0□□□□□ -2.41
ATM-228ENST00000639240 MAP3K1Q13233 1512 aa-0.01□□□□□ -2.41
ATM-228ENST00000639240 RRBP1Q9P2E9 1410 aaKnown RBP-0.01□□□□□ -2.41
ATM-228ENST00000639240 NSD1Q96L73 2696 aaPredicted RBP-0.01□□□□□ -2.41
ATM-228ENST00000639240 HEPN1Q6WQI6 88 aa-0.01□□□□□ -2.41
ATM-228ENST00000639240 SPRR2GQ9BYE4 73 aa-0.01□□□□□ -2.41
ATM-228ENST00000639240 HSPG2P98160 4391 aa-0.01□□□□□ -2.41
ATM-228ENST00000639240 HMCN2Q8NDA2 5059 aa-0.02□□□□□ -2.41
ATM-228ENST00000639240 ABCA8O94911 1581 aa-0.02□□□□□ -2.41
ATM-228ENST00000639240 ADAMTS12P58397 1594 aa-0.02□□□□□ -2.41
ATM-228ENST00000639240 APC2O95996 2303 aa-0.02□□□□□ -2.41
ATM-228ENST00000639240 HECTD4Q9Y4D8 3996 aa-0.02□□□□□ -2.41
ATM-228ENST00000639240 LCE6AA0A183 80 aa-0.02□□□□□ -2.41
ATM-228ENST00000639240 LELP1Q5T871 98 aa-0.02□□□□□ -2.41
ATM-228ENST00000639240 COL6A3P12111 3177 aa-0.02□□□□□ -2.41
ATM-228ENST00000639240 MAP1BP46821 2468 aaKnown RBP-0.02□□□□□ -2.41
ATM-228ENST00000639240 WIZO95785 1651 aa-0.02□□□□□ -2.41
ATM-228ENST00000639240 CICQ96RK0 1608 aaPredicted RBP-0.02□□□□□ -2.41
ATM-228ENST00000639240 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.02□□□□□ -2.41
ATM-228ENST00000639240 DDX60LQ5H9U9 1706 aaKnown RBP-0.03□□□□□ -2.41
ATM-228ENST00000639240 HMGA1P17096 107 aaKnown RBP-0.03□□□□□ -2.41
ATM-228ENST00000639240 WFDC13Q8IUB5 93 aa-0.03□□□□□ -2.41
ATM-228ENST00000639240 PLCH1Q4KWH8 1693 aa-0.03□□□□□ -2.41
ATM-228ENST00000639240 PLXNC1O60486 1568 aa-0.03□□□□□ -2.41
ATM-228ENST00000639240 FLNBO75369 2602 aaKnown RBP-0.04□□□□□ -2.42
ATM-228ENST00000639240 TRANK1O15050 2925 aa-0.04□□□□□ -2.42
ATM-228ENST00000639240 UMAD1C9J7I0 102 aa-0.04□□□□□ -2.42
ATM-228ENST00000639240 BVES-AS1Q5T3Y7 98 aa-0.04□□□□□ -2.42
ATM-228ENST00000639240 THOC2Q8NI27 1593 aaKnown RBP-0.04□□□□□ -2.42
ATM-228ENST00000639240 CD163L1Q9NR16 1453 aa-0.04□□□□□ -2.42
ATM-228ENST00000639240 KNL1Q8NG31 2342 aa-0.04□□□□□ -2.42
ATM-228ENST00000639240 ZANQ9Y493 2812 aa-0.05□□□□□ -2.42
ATM-228ENST00000639240 H3BUT2 72 aa-0.05□□□□□ -2.42
ATM-228ENST00000639240 DEFB135Q30KP9 77 aa-0.05□□□□□ -2.42
ATM-228ENST00000639240 ACANP16112 2415 aa-0.05□□□□□ -2.42
ATM-228ENST00000639240 ANKARQ7Z5J8 1434 aa-0.05□□□□□ -2.42
ATM-228ENST00000639240 DEPDC5O75140 1603 aa-0.05□□□□□ -2.42
ATM-228ENST00000639240 TENM2Q9NT68 2774 aa-0.06□□□□□ -2.42
ATM-228ENST00000639240 NDUFA3O95167 84 aa-0.06□□□□□ -2.42
ATM-228ENST00000639240 IFI6P09912 130 aa-0.06□□□□□ -2.42
ATM-228ENST00000639240 IFI27P40305 119 aaPredicted RBP-0.06□□□□□ -2.42
ATM-228ENST00000639240 MUC12Q9UKN1 5478 aa-0.06□□□□□ -2.42
ATM-228ENST00000639240 ANKRD50Q9ULJ7 1429 aa-0.06□□□□□ -2.42
ATM-228ENST00000639240 RICTORQ6R327 1708 aa-0.07□□□□□ -2.42
ATM-228ENST00000639240 PARP4Q9UKK3 1724 aaKnown RBP-0.07□□□□□ -2.42
ATM-228ENST00000639240 ITSN1Q15811 1721 aa-0.07□□□□□ -2.42
ATM-228ENST00000639240 LRRIQ1Q96JM4 1722 aa-0.07□□□□□ -2.42
ATM-228ENST00000639240 PCNX1Q96RV3 2341 aa-0.08□□□□□ -2.42
ATM-228ENST00000639240 RNF17Q9BXT8 1623 aaKnown RBP-0.08□□□□□ -2.42
ATM-228ENST00000639240 C3orf79P0CE67 100 aa-0.08□□□□□ -2.42
ATM-228ENST00000639240 C18orf32Q8TCD1 76 aa-0.08□□□□□ -2.42
ATM-228ENST00000639240 MUC2Q02817 5179 aa-0.08□□□□□ -2.42
ATM-228ENST00000639240 SMIM13P0DJ93 91 aa-0.09□□□□□ -2.42
ATM-228ENST00000639240 NREPQ16612 68 aa-0.09□□□□□ -2.42
ATM-228ENST00000639240 TJP1Q07157 1748 aa-0.1□□□□□ -2.42
ATM-228ENST00000639240 LRP2P98164 4655 aa-0.1□□□□□ -2.43
ATM-228ENST00000639240 STAB1Q9NY15 2570 aa-0.1□□□□□ -2.43
ATM-228ENST00000639240 MAP1AP78559 2803 aaPredicted RBP-0.1□□□□□ -2.43
ATM-228ENST00000639240 A0A087WXM4 84 aa-0.1□□□□□ -2.43
ATM-228ENST00000639240 NDUFA4O00483 81 aa-0.1□□□□□ -2.43
ATM-228ENST00000639240 PRO3102Q9H379 93 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms