RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 MIR22HGQ0VDD5 57 aa12.11□□□□□ -0.47
SCARB2-213ENST00000638680 PLA2G1BP04054 148 aaKnown RBP12.07□□□□□ -0.48
SCARB2-213ENST00000638680 C19orf73Q9NVV2 129 aa12.07□□□□□ -0.48
SCARB2-213ENST00000638680 LINC00612Q8N6U2 182 aa12.06□□□□□ -0.48
SCARB2-213ENST00000638680 KRTAP10-11P60412 298 aa12.05□□□□□ -0.48
SCARB2-213ENST00000638680 PLA2G2DQ9UNK4 145 aa12.04□□□□□ -0.48
SCARB2-213ENST00000638680 CD164Q04900 197 aa12.03□□□□□ -0.48
SCARB2-213ENST00000638680 TLX1NBP0CAT3 122 aa12.03□□□□□ -0.48
SCARB2-213ENST00000638680 A0A1W2PNM2 257 aa12.03□□□□□ -0.48
SCARB2-213ENST00000638680 OBSCN-AS1Q96MR7 158 aa12.03□□□□□ -0.48
SCARB2-213ENST00000638680 ZNF462Q96JM2 2506 aa12.02□□□□□ -0.48
SCARB2-213ENST00000638680 KTN1-AS1Q86SY8 53 aa12.02□□□□□ -0.49
SCARB2-213ENST00000638680 ZNF861PO60384 105 aa11.99□□□□□ -0.49
SCARB2-213ENST00000638680 ANKRD17O75179 2603 aaKnown RBP11.99□□□□□ -0.49
SCARB2-213ENST00000638680 MTORP42345 2549 aa11.99□□□□□ -0.49
SCARB2-213ENST00000638680 ANAPC11Q9NYG5 84 aa11.98□□□□□ -0.49
SCARB2-213ENST00000638680 APLNQ9ULZ1 77 aa11.98□□□□□ -0.49
SCARB2-213ENST00000638680 KRTAP10-3P60369 221 aa11.98□□□□□ -0.49
SCARB2-213ENST00000638680 A0A096LNT2 108 aa11.97□□□□□ -0.49
SCARB2-213ENST00000638680 POLQO75417 2590 aa11.96□□□□□ -0.49
SCARB2-213ENST00000638680 ZNF575Q86XF7 245 aa11.95□□□□□ -0.5
SCARB2-213ENST00000638680 SPANXA2-OT1Q8N9U9 137 aa11.94□□□□□ -0.5
SCARB2-213ENST00000638680 CASC10Q5T4H9 136 aa11.93□□□□□ -0.5
SCARB2-213ENST00000638680 C9orf92A6NGG3 77 aa11.92□□□□□ -0.5
SCARB2-213ENST00000638680 K7EIL1 84 aa11.92□□□□□ -0.5
SCARB2-213ENST00000638680 LCA10Q71F78 164 aa11.92□□□□□ -0.5
SCARB2-213ENST00000638680 CRIPTQ9P021 101 aa11.92□□□□□ -0.5
SCARB2-213ENST00000638680 SPTBN4Q9H254 2564 aa11.91□□□□□ -0.5
SCARB2-213ENST00000638680 CHD8Q9HCK8 2581 aa11.91□□□□□ -0.5
SCARB2-213ENST00000638680 C9orf163Q8N9P6 203 aa11.9□□□□□ -0.5
SCARB2-213ENST00000638680 LINC00304Q8N9R0 145 aa11.9□□□□□ -0.51
SCARB2-213ENST00000638680 IGLV5-48A0A075B6I7 105 aa11.88□□□□□ -0.51
SCARB2-213ENST00000638680 CDC42SE1Q9NRR8 79 aa11.88□□□□□ -0.51
SCARB2-213ENST00000638680 OCR1Q9BZK8 76 aa11.87□□□□□ -0.51
SCARB2-213ENST00000638680 A0A087WTM6 91 aa11.87□□□□□ -0.51
SCARB2-213ENST00000638680 SPRR4Q96PI1 79 aa11.86□□□□□ -0.51
SCARB2-213ENST00000638680 WWC2-AS2Q96NR7 200 aa11.84□□□□□ -0.51
SCARB2-213ENST00000638680 PSORS1C2Q9UIG4 136 aa11.84□□□□□ -0.51
SCARB2-213ENST00000638680 ACANP16112 2415 aa11.83□□□□□ -0.52
SCARB2-213ENST00000638680 FAM104AQ969W3 186 aa11.82□□□□□ -0.52
SCARB2-213ENST00000638680 IGLV7-43P04211 117 aa11.82□□□□□ -0.52
SCARB2-213ENST00000638680 Q1T7F1 81 aa11.82□□□□□ -0.52
SCARB2-213ENST00000638680 DNAH12Q6ZR08 3092 aa11.81□□□□□ -0.52
SCARB2-213ENST00000638680 CNBPP62633 177 aaKnown RBP11.8□□□□□ -0.52
SCARB2-213ENST00000638680 Q8N1X5 172 aa11.79□□□□□ -0.52
SCARB2-213ENST00000638680 IGLV5-37A0A075B6J1 123 aa11.79□□□□□ -0.52
SCARB2-213ENST00000638680 PRR26Q8N8Z3 221 aa11.74□□□□□ -0.53
SCARB2-213ENST00000638680 A0A0D9SG42 100 aa11.74□□□□□ -0.53
SCARB2-213ENST00000638680 WIPF1O43516 503 aa11.72□□□□□ -0.53
SCARB2-213ENST00000638680 SMR3BP02814 79 aaPredicted RBP11.71□□□□□ -0.53
SCARB2-213ENST00000638680 UTRNP46939 3433 aa11.7□□□□□ -0.54
SCARB2-213ENST00000638680 F8P00451 2351 aa11.69□□□□□ -0.54
SCARB2-213ENST00000638680 FAM229BQ4G0N7 80 aa11.68□□□□□ -0.54
SCARB2-213ENST00000638680 Q5XG85 94 aa11.68□□□□□ -0.54
SCARB2-213ENST00000638680 COX6B2Q6YFQ2 88 aa11.68□□□□□ -0.54
SCARB2-213ENST00000638680 CYSTM1Q9H1C7 97 aa11.67□□□□□ -0.54
SCARB2-213ENST00000638680 IGLV7-46A0A075B6I9 117 aa11.66□□□□□ -0.54
SCARB2-213ENST00000638680 KRTAP1-3Q8IUG1 177 aa11.65□□□□□ -0.54
SCARB2-213ENST00000638680 J3QL48 77 aa11.63□□□□□ -0.55
SCARB2-213ENST00000638680 Q75L30 129 aa11.62□□□□□ -0.55
SCARB2-213ENST00000638680 LINC01554Q52M75 96 aa11.61□□□□□ -0.55
SCARB2-213ENST00000638680 PRRC2CQ9Y520 2896 aaKnown RBP11.61□□□□□ -0.55
SCARB2-213ENST00000638680 Q8NDZ9 215 aa11.59□□□□□ -0.55
SCARB2-213ENST00000638680 CR1P17927 2039 aa11.58□□□□□ -0.56
SCARB2-213ENST00000638680 FP248Q71RG6 208 aaPredicted RBP11.58□□□□□ -0.56
SCARB2-213ENST00000638680 KRTAP1-1Q07627 177 aa11.57□□□□□ -0.56
SCARB2-213ENST00000638680 HRES1P13985 223 aa11.57□□□□□ -0.56
SCARB2-213ENST00000638680 RBM12B-AS1Q9P1G2 102 aa11.57□□□□□ -0.56
SCARB2-213ENST00000638680 CEP350Q5VT06 3117 aa11.53□□□□□ -0.56
SCARB2-213ENST00000638680 Q8N9P0 234 aaPredicted RBP11.53□□□□□ -0.56
SCARB2-213ENST00000638680 MMP24-AS1A0A0U1RRL7 71 aa11.52□□□□□ -0.57
SCARB2-213ENST00000638680 FASNP49327 2511 aaKnown RBP11.51□□□□□ -0.57
SCARB2-213ENST00000638680 LINC01558Q9Y6Z2 57 aa11.51□□□□□ -0.57
SCARB2-213ENST00000638680 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.5□□□□□ -0.57
SCARB2-213ENST00000638680 A0A1B0GU33 70 aa11.48□□□□□ -0.57
SCARB2-213ENST00000638680 Q5VV11 94 aa11.43□□□□□ -0.58
SCARB2-213ENST00000638680 PRAC1Q96KF2 57 aa11.43□□□□□ -0.58
SCARB2-213ENST00000638680 SPRR1AP35321 89 aa11.42□□□□□ -0.58
SCARB2-213ENST00000638680 TNP2Q05952 138 aa11.42□□□□□ -0.58
SCARB2-213ENST00000638680 BPTFQ12830 3046 aa11.38□□□□□ -0.59
SCARB2-213ENST00000638680 OXTP01178 125 aa11.37□□□□□ -0.59
SCARB2-213ENST00000638680 PCNTO95613 3336 aa11.36□□□□□ -0.59
SCARB2-213ENST00000638680 LUZP6Q538Z0 58 aa11.36□□□□□ -0.59
SCARB2-213ENST00000638680 C5orf42Q9H799 3197 aa11.35□□□□□ -0.59
SCARB2-213ENST00000638680 SPINK7P58062 85 aa11.35□□□□□ -0.59
SCARB2-213ENST00000638680 LINC00472Q9H8W2 130 aa11.34□□□□□ -0.59
SCARB2-213ENST00000638680 USP24Q9UPU5 2620 aa11.33□□□□□ -0.6
SCARB2-213ENST00000638680 ZCCHC13Q8WW36 166 aaKnown RBP11.31□□□□□ -0.6
SCARB2-213ENST00000638680 Q5W150 140 aa11.31□□□□□ -0.6
SCARB2-213ENST00000638680 Q6ZSA8 131 aa11.28□□□□□ -0.6
SCARB2-213ENST00000638680 PLAC8Q9NZF1 115 aa11.27□□□□□ -0.6
SCARB2-213ENST00000638680 CSAG1Q6PB30 78 aa11.27□□□□□ -0.61
SCARB2-213ENST00000638680 EPG5Q9HCE0 2579 aa11.27□□□□□ -0.61
SCARB2-213ENST00000638680 SPRR1BP22528 89 aa11.27□□□□□ -0.61
SCARB2-213ENST00000638680 DMAC1Q96GE9 116 aa11.24□□□□□ -0.61
SCARB2-213ENST00000638680 MGAM2Q2M2H8 2515 aa11.23□□□□□ -0.61
SCARB2-213ENST00000638680 H3BS24 57 aa11.22□□□□□ -0.61
SCARB2-213ENST00000638680 CAMK2N1Q7Z7J9 78 aa11.22□□□□□ -0.61
SCARB2-213ENST00000638680 HECTD1Q9ULT8 2610 aa11.21□□□□□ -0.61
SCARB2-213ENST00000638680 CHD7Q9P2D1 2997 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms