RNA–Protein interactions for RNA: ENST00000637490.1

SYNGAP1-221, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 132 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-221ENST00000637490 LYNX1P0DP58 116 aa1.38□□□□□ -2.19
SYNGAP1-221ENST00000637490 Q6ZRN7 208 aaPredicted RBP1.38□□□□□ -2.19
SYNGAP1-221ENST00000637490 NOP10Q9NPE3 64 aaKnown RBP1.38□□□□□ -2.19
SYNGAP1-221ENST00000637490 AHCTF1Q8WYP5 2266 aa1.38□□□□□ -2.19
SYNGAP1-221ENST00000637490 K7EIL1 84 aa1.37□□□□□ -2.19
SYNGAP1-221ENST00000637490 UBE2DNLQ8IWF7 75 aa1.37□□□□□ -2.19
SYNGAP1-221ENST00000637490 PRO0255Q9UI72 69 aa1.37□□□□□ -2.19
SYNGAP1-221ENST00000637490 WNK2Q9Y3S1 2297 aa1.37□□□□□ -2.19
SYNGAP1-221ENST00000637490 LELP1Q5T871 98 aa1.36□□□□□ -2.19
SYNGAP1-221ENST00000637490 SPTBN1Q01082 2364 aaKnown RBP1.36□□□□□ -2.19
SYNGAP1-221ENST00000637490 WNK1Q9H4A3 2382 aa1.36□□□□□ -2.19
SYNGAP1-221ENST00000637490 CNOT1A5YKK6 2376 aaKnown RBP1.35□□□□□ -2.19
SYNGAP1-221ENST00000637490 WDR87Q6ZQQ6 2873 aa1.35□□□□□ -2.19
SYNGAP1-221ENST00000637490 ANKRD17O75179 2603 aaKnown RBP1.35□□□□□ -2.19
SYNGAP1-221ENST00000637490 KRTAP12-2P59991 146 aa1.35□□□□□ -2.19
SYNGAP1-221ENST00000637490 PRLHP81277 87 aa1.35□□□□□ -2.19
SYNGAP1-221ENST00000637490 BRD3OSQ6XYD6 125 aa1.35□□□□□ -2.19
SYNGAP1-221ENST00000637490 DEFB123Q8N688 67 aa1.35□□□□□ -2.19
SYNGAP1-221ENST00000637490 C10orf95Q9H7T3 257 aa1.35□□□□□ -2.19
SYNGAP1-221ENST00000637490 COL6A3P12111 3177 aa1.35□□□□□ -2.19
SYNGAP1-221ENST00000637490 CACNA1GO43497 2377 aa1.34□□□□□ -2.19
SYNGAP1-221ENST00000637490 TRIOBPQ9H2D6 2365 aa1.34□□□□□ -2.19
SYNGAP1-221ENST00000637490 DEFB136Q30KP8 78 aa1.34□□□□□ -2.19
SYNGAP1-221ENST00000637490 XP32Q5T750 250 aa1.34□□□□□ -2.19
SYNGAP1-221ENST00000637490 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.34□□□□□ -2.2
SYNGAP1-221ENST00000637490 CEP350Q5VT06 3117 aa1.33□□□□□ -2.2
SYNGAP1-221ENST00000637490 COL6A6A6NMZ7 2263 aa1.33□□□□□ -2.2
SYNGAP1-221ENST00000637490 CACNA1BQ00975 2339 aa1.33□□□□□ -2.2
SYNGAP1-221ENST00000637490 U3KQA8 63 aa1.33□□□□□ -2.2
SYNGAP1-221ENST00000637490 ALMS1Q8TCU4 4167 aa1.33□□□□□ -2.2
SYNGAP1-221ENST00000637490 CACNA1EQ15878 2313 aa1.33□□□□□ -2.2
SYNGAP1-221ENST00000637490 ZFHX2Q9C0A1 2572 aaPredicted RBP1.32□□□□□ -2.2
SYNGAP1-221ENST00000637490 SPINK1P00995 79 aa1.32□□□□□ -2.2
SYNGAP1-221ENST00000637490 DEFB103AP81534 67 aa1.32□□□□□ -2.2
SYNGAP1-221ENST00000637490 PP632Q6XCG6 107 aa1.32□□□□□ -2.2
SYNGAP1-221ENST00000637490 MGAQ8IWI9 3026 aa1.32□□□□□ -2.2
SYNGAP1-221ENST00000637490 KRTAP3-2Q9BYR7 98 aa1.3□□□□□ -2.2
SYNGAP1-221ENST00000637490 S4R3F8 94 aa1.3□□□□□ -2.2
SYNGAP1-221ENST00000637490 TPRP12270 2363 aaKnown RBP1.3□□□□□ -2.2
SYNGAP1-221ENST00000637490 A0A096LPF7 62 aa1.29□□□□□ -2.2
SYNGAP1-221ENST00000637490 H3BNG1 76 aa1.29□□□□□ -2.2
SYNGAP1-221ENST00000637490 KRTAP7-1Q8IUC3 87 aa1.29□□□□□ -2.2
SYNGAP1-221ENST00000637490 CHD7Q9P2D1 2997 aa1.29□□□□□ -2.2
SYNGAP1-221ENST00000637490 KRTAP3-3Q9BYR6 98 aa1.28□□□□□ -2.2
SYNGAP1-221ENST00000637490 APLNQ9ULZ1 77 aa1.28□□□□□ -2.2
SYNGAP1-221ENST00000637490 SRCAPQ6ZRS2 3230 aa1.28□□□□□ -2.21
SYNGAP1-221ENST00000637490 FLG2Q5D862 2391 aaPredicted RBP1.27□□□□□ -2.21
SYNGAP1-221ENST00000637490 SPRR5A0A1B0GTR4 108 aa1.27□□□□□ -2.21
SYNGAP1-221ENST00000637490 KRTAP10-8P60410 259 aa1.27□□□□□ -2.21
SYNGAP1-221ENST00000637490 LINC01556Q5JQF7 62 aa1.27□□□□□ -2.21
SYNGAP1-221ENST00000637490 IGF2RP11717 2491 aa1.27□□□□□ -2.21
SYNGAP1-221ENST00000637490 ZDBF2Q9HCK1 2354 aa1.27□□□□□ -2.21
SYNGAP1-221ENST00000637490 AKAP6Q13023 2319 aa1.27□□□□□ -2.21
SYNGAP1-221ENST00000637490 PCNX1Q96RV3 2341 aa1.27□□□□□ -2.21
SYNGAP1-221ENST00000637490 KRTAP13-1Q8IUC0 172 aa1.26□□□□□ -2.21
SYNGAP1-221ENST00000637490 DEFB124Q8NES8 71 aa1.26□□□□□ -2.21
SYNGAP1-221ENST00000637490 SPTBN2O15020 2390 aa1.26□□□□□ -2.21
SYNGAP1-221ENST00000637490 NOTCH3Q9UM47 2321 aa1.26□□□□□ -2.21
SYNGAP1-221ENST00000637490 ZZEF1O43149 2961 aa1.25□□□□□ -2.21
SYNGAP1-221ENST00000637490 ACACAQ13085 2346 aa1.25□□□□□ -2.21
SYNGAP1-221ENST00000637490 A0A096LNI7 61 aa1.25□□□□□ -2.21
SYNGAP1-221ENST00000637490 A0A0D9SG42 100 aa1.25□□□□□ -2.21
SYNGAP1-221ENST00000637490 KRTAP3-1Q9BYR8 98 aa1.25□□□□□ -2.21
SYNGAP1-221ENST00000637490 CFAP54Q96N23 3096 aa1.25□□□□□ -2.21
SYNGAP1-221ENST00000637490 TENM2Q9NT68 2774 aa1.25□□□□□ -2.21
SYNGAP1-221ENST00000637490 PKDREJQ9NTG1 2253 aa1.24□□□□□ -2.21
SYNGAP1-221ENST00000637490 GPR98Q8WXG9 6306 aa1.24□□□□□ -2.21
SYNGAP1-221ENST00000637490 SPART-AS1P0CW21 52 aa1.24□□□□□ -2.21
SYNGAP1-221ENST00000637490 KRTAP12-1P59990 96 aa1.24□□□□□ -2.21
SYNGAP1-221ENST00000637490 SPINK6Q6UWN8 80 aa1.24□□□□□ -2.21
SYNGAP1-221ENST00000637490 CENPFP49454 3210 aa1.23□□□□□ -2.21
SYNGAP1-221ENST00000637490 KRTAP10-6P60371 365 aaPredicted RBP1.23□□□□□ -2.21
SYNGAP1-221ENST00000637490 Q5VSD8 79 aa1.23□□□□□ -2.21
SYNGAP1-221ENST00000637490 PCNTO95613 3336 aa1.23□□□□□ -2.21
SYNGAP1-221ENST00000637490 CEP250Q9BV73 2442 aa1.23□□□□□ -2.21
SYNGAP1-221ENST00000637490 TNRC18O15417 2968 aaPredicted RBP1.22□□□□□ -2.21
SYNGAP1-221ENST00000637490 M0QZ58 72 aa1.22□□□□□ -2.21
SYNGAP1-221ENST00000637490 KRTAP13-4Q3LI77 160 aa1.22□□□□□ -2.21
SYNGAP1-221ENST00000637490 PTPRZ1P23471 2315 aaPredicted RBP1.22□□□□□ -2.21
SYNGAP1-221ENST00000637490 VPS13AQ96RL7 3174 aa1.22□□□□□ -2.21
SYNGAP1-221ENST00000637490 GOLGB1Q14789 3259 aaKnown RBP1.21□□□□□ -2.21
SYNGAP1-221ENST00000637490 FN1P02751 2386 aaKnown RBP1.21□□□□□ -2.22
SYNGAP1-221ENST00000637490 SPTA1P02549 2419 aa1.21□□□□□ -2.22
SYNGAP1-221ENST00000637490 OTOGQ6ZRI0 2925 aa1.21□□□□□ -2.22
SYNGAP1-221ENST00000637490 NBEAQ8NFP9 2946 aa1.21□□□□□ -2.22
SYNGAP1-221ENST00000637490 MAP1BP46821 2468 aaKnown RBP1.21□□□□□ -2.22
SYNGAP1-221ENST00000637490 SPTBN4Q9H254 2564 aa1.2□□□□□ -2.22
SYNGAP1-221ENST00000637490 GPR179Q6PRD1 2367 aa1.2□□□□□ -2.22
SYNGAP1-221ENST00000637490 APC2O95996 2303 aa1.2□□□□□ -2.22
SYNGAP1-221ENST00000637490 A0A1B0GVY2 172 aa1.2□□□□□ -2.22
SYNGAP1-221ENST00000637490 HTN3P15516 51 aa1.2□□□□□ -2.22
SYNGAP1-221ENST00000637490 KRTAP13-2Q52LG2 175 aa1.2□□□□□ -2.22
SYNGAP1-221ENST00000637490 MAPK1IP1LQ8NDC0 245 aa1.2□□□□□ -2.22
SYNGAP1-221ENST00000637490 ASH1LQ9NR48 2969 aaKnown RBP1.2□□□□□ -2.22
SYNGAP1-221ENST00000637490 CFAP47Q6ZTR5 3102 aa1.2□□□□□ -2.22
SYNGAP1-221ENST00000637490 PIEZO2Q9H5I5 2752 aa1.19□□□□□ -2.22
SYNGAP1-221ENST00000637490 CHD6Q8TD26 2715 aa1.19□□□□□ -2.22
SYNGAP1-221ENST00000637490 PRUNE2Q8WUY3 3088 aa1.19□□□□□ -2.22
SYNGAP1-221ENST00000637490 HIVEP2P31629 2446 aa1.19□□□□□ -2.22
SYNGAP1-221ENST00000637490 FAM186AA6NE01 2351 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms