RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 RPL24P83731 157 aaKnown RBP5.95□□□□□ -1.46
LINC00339-210ENST00000635675 Q6ZVH6 145 aa5.95□□□□□ -1.46
LINC00339-210ENST00000635675 LOC107984156A0A0G2JMH3 177 aa5.94□□□□□ -1.46
LINC00339-210ENST00000635675 RPL37AP8A6NKH3 93 aa5.94□□□□□ -1.46
LINC00339-210ENST00000635675 ARL17AQ8IVW1 177 aa5.94□□□□□ -1.46
LINC00339-210ENST00000635675 NAA38Q9BRA0 125 aaKnown RBP5.94□□□□□ -1.46
LINC00339-210ENST00000635675 TMEM238LA0A1B0GVL6 79 aa5.93□□□□□ -1.46
LINC00339-210ENST00000635675 A6NDN8 102 aa5.93□□□□□ -1.46
LINC00339-210ENST00000635675 A6NJY4 79 aa5.93□□□□□ -1.46
LINC00339-210ENST00000635675 H7C2G1 150 aa5.93□□□□□ -1.46
LINC00339-210ENST00000635675 IGLV1-50A0A075B6I6 118 aa5.92□□□□□ -1.46
LINC00339-210ENST00000635675 NCR3O14931 201 aa5.92□□□□□ -1.46
LINC00339-210ENST00000635675 IFITM1P13164 125 aa5.92□□□□□ -1.46
LINC00339-210ENST00000635675 COL5A1-AS1Q5SY13 56 aa5.92□□□□□ -1.46
LINC00339-210ENST00000635675 IGKV2-28A0A075B6P5 120 aa5.91□□□□□ -1.46
LINC00339-210ENST00000635675 M0R378 163 aa5.91□□□□□ -1.46
LINC00339-210ENST00000635675 IGKV2D-28P01615 120 aa5.91□□□□□ -1.46
LINC00339-210ENST00000635675 COPS9Q8WXC6 57 aa5.91□□□□□ -1.46
LINC00339-210ENST00000635675 LRP1Q07954 4544 aaKnown RBP5.91□□□□□ -1.46
LINC00339-210ENST00000635675 TAX1BP3O14907 124 aa5.91□□□□□ -1.46
LINC00339-210ENST00000635675 ZNF861PO60384 105 aa5.91□□□□□ -1.46
LINC00339-210ENST00000635675 BCE1O60756 84 aa5.91□□□□□ -1.46
LINC00339-210ENST00000635675 CFC1BP0CG36 223 aa5.91□□□□□ -1.46
LINC00339-210ENST00000635675 CFC1P0CG37 223 aa5.91□□□□□ -1.46
LINC00339-210ENST00000635675 Q1RN00 199 aa5.91□□□□□ -1.46
LINC00339-210ENST00000635675 REG3GQ6UW15 175 aa5.91□□□□□ -1.46
LINC00339-210ENST00000635675 DIRC1Q969H9 104 aa5.91□□□□□ -1.46
LINC00339-210ENST00000635675 LINC01600Q96MT4 127 aa5.91□□□□□ -1.46
LINC00339-210ENST00000635675 H0Y9J4 135 aa5.9□□□□□ -1.47
LINC00339-210ENST00000635675 MT1HL1P0DM35 61 aa5.9□□□□□ -1.47
LINC00339-210ENST00000635675 RPL13AP40429 203 aaKnown RBP5.9□□□□□ -1.47
LINC00339-210ENST00000635675 OR13C6PQ8NH95 151 aa5.89□□□□□ -1.47
LINC00339-210ENST00000635675 A0A0B4J2C4 111 aa5.88□□□□□ -1.47
LINC00339-210ENST00000635675 A0A1B0GV90 55 aa5.88□□□□□ -1.47
LINC00339-210ENST00000635675 H3BUT2 72 aa5.88□□□□□ -1.47
LINC00339-210ENST00000635675 NDUFC2O95298 119 aa5.88□□□□□ -1.47
LINC00339-210ENST00000635675 TSPAN13O95857 204 aa5.88□□□□□ -1.47
LINC00339-210ENST00000635675 KRTAP13-1Q8IUC0 172 aa5.88□□□□□ -1.47
LINC00339-210ENST00000635675 TMEM126AQ9H061 195 aa5.88□□□□□ -1.47
LINC00339-210ENST00000635675 FAT3Q8TDW7 4589 aa5.87□□□□□ -1.47
LINC00339-210ENST00000635675 TRBV10-2A0A0K0K1G8 114 aa5.87□□□□□ -1.47
LINC00339-210ENST00000635675 A0A1B0GWB2 263 aa5.87□□□□□ -1.47
LINC00339-210ENST00000635675 RPL28P46779 137 aaKnown RBP5.87□□□□□ -1.47
LINC00339-210ENST00000635675 LINC00337Q8N6G1 96 aa5.87□□□□□ -1.47
LINC00339-210ENST00000635675 PRO1854Q9UHT4 67 aa5.87□□□□□ -1.47
LINC00339-210ENST00000635675 TRBV10-3A0A0K0K1G6 114 aa5.86□□□□□ -1.47
LINC00339-210ENST00000635675 PSMB2P49721 201 aa5.86□□□□□ -1.47
LINC00339-210ENST00000635675 KRTAP10-8P60410 259 aa5.86□□□□□ -1.47
LINC00339-210ENST00000635675 KCNQ1DNQ9H478 68 aa5.86□□□□□ -1.47
LINC00339-210ENST00000635675 C9orf118A6NHY6 69 aa5.85□□□□□ -1.47
LINC00339-210ENST00000635675 KRTAP1-4P0C5Y4 121 aa5.85□□□□□ -1.47
LINC00339-210ENST00000635675 UBE2AP49459 152 aa5.85□□□□□ -1.47
LINC00339-210ENST00000635675 PRYO14603 147 aa5.84□□□□□ -1.47
LINC00339-210ENST00000635675 IGLV6-57P01721 117 aa5.84□□□□□ -1.47
LINC00339-210ENST00000635675 SPRR1AP35321 89 aa5.84□□□□□ -1.47
LINC00339-210ENST00000635675 PRLHP81277 87 aa5.84□□□□□ -1.47
LINC00339-210ENST00000635675 S100A7L2Q5SY68 101 aa5.84□□□□□ -1.47
LINC00339-210ENST00000635675 FAM19A1Q7Z5A9 133 aa5.84□□□□□ -1.47
LINC00339-210ENST00000635675 TRAV13-2A0A0B4J235 113 aa5.83□□□□□ -1.48
LINC00339-210ENST00000635675 KRTAP4-16G5E9R7 235 aaPredicted RBP5.83□□□□□ -1.48
LINC00339-210ENST00000635675 HERC1Q15751 4861 aa5.83□□□□□ -1.48
LINC00339-210ENST00000635675 VAMP3Q15836 100 aa5.82□□□□□ -1.48
LINC00339-210ENST00000635675 PPDPFQ9H3Y8 114 aa5.82□□□□□ -1.48
LINC00339-210ENST00000635675 TRIAP1O43715 76 aa5.82□□□□□ -1.48
LINC00339-210ENST00000635675 SCGB1C2P0DMR2 95 aa5.82□□□□□ -1.48
LINC00339-210ENST00000635675 PRR26Q8N8Z3 221 aa5.82□□□□□ -1.48
LINC00339-210ENST00000635675 A0A1W2PPM0 123 aa5.81□□□□□ -1.48
LINC00339-210ENST00000635675 FABP2P12104 132 aa5.81□□□□□ -1.48
LINC00339-210ENST00000635675 SMIM11BQ8TCY0 68 aa5.81□□□□□ -1.48
LINC00339-210ENST00000635675 TNXBP22105 4242 aa5.79□□□□□ -1.48
LINC00339-210ENST00000635675 TRAV23DV6A0A075B6W5 121 aa5.79□□□□□ -1.48
LINC00339-210ENST00000635675 ETDCA0A1B0GVM5 59 aa5.79□□□□□ -1.48
LINC00339-210ENST00000635675 B5MCH6 92 aa5.79□□□□□ -1.48
LINC00339-210ENST00000635675 CLEC2BQ92478 149 aa5.79□□□□□ -1.48
LINC00339-210ENST00000635675 HIGD2AQ9BW72 106 aa5.79□□□□□ -1.48
LINC00339-210ENST00000635675 SPCS1Q9Y6A9 102 aa5.79□□□□□ -1.48
LINC00339-210ENST00000635675 ZNF73O43830 326 aaPredicted RBP5.78□□□□□ -1.48
LINC00339-210ENST00000635675 ANAPC11Q9NYG5 84 aa5.78□□□□□ -1.48
LINC00339-210ENST00000635675 A0A087X002 238 aa5.77□□□□□ -1.49
LINC00339-210ENST00000635675 LYRM7Q5U5X0 104 aa5.77□□□□□ -1.49
LINC00339-210ENST00000635675 SMCR5Q8TEV8 140 aa5.77□□□□□ -1.49
LINC00339-210ENST00000635675 CBY1Q9Y3M2 126 aa5.77□□□□□ -1.49
LINC00339-210ENST00000635675 K7EP34 96 aa5.76□□□□□ -1.49
LINC00339-210ENST00000635675 TCL1BO95988 128 aa5.76□□□□□ -1.49
LINC00339-210ENST00000635675 COX6CP09669 75 aa5.76□□□□□ -1.49
LINC00339-210ENST00000635675 CRYGAP11844 174 aa5.76□□□□□ -1.49
LINC00339-210ENST00000635675 FAM229BQ4G0N7 80 aa5.76□□□□□ -1.49
LINC00339-210ENST00000635675 C6orf99Q4VX62 202 aa5.76□□□□□ -1.49
LINC00339-210ENST00000635675 Q6ZRX8 168 aa5.76□□□□□ -1.49
LINC00339-210ENST00000635675 MTURNQ8N3F0 131 aa5.76□□□□□ -1.49
LINC00339-210ENST00000635675 SPRR4Q96PI1 79 aa5.75□□□□□ -1.49
LINC00339-210ENST00000635675 Q9BRP9 147 aa5.75□□□□□ -1.49
LINC00339-210ENST00000635675 ERC2-IT1O76042 136 aa5.74□□□□□ -1.49
LINC00339-210ENST00000635675 KRTAP13-2Q52LG2 175 aa5.74□□□□□ -1.49
LINC00339-210ENST00000635675 GTF2H5Q6ZYL4 71 aa5.74□□□□□ -1.49
LINC00339-210ENST00000635675 FAM218AQ96MZ4 157 aa5.74□□□□□ -1.49
LINC00339-210ENST00000635675 ZNF706Q9Y5V0 76 aaPredicted RBP5.74□□□□□ -1.49
LINC00339-210ENST00000635675 H3BMG7 143 aa5.73□□□□□ -1.49
LINC00339-210ENST00000635675 COX7BP24311 80 aa5.73□□□□□ -1.49
LINC00339-210ENST00000635675 ATXN8Q156A1 80 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms