RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 PTPRZ1P23471 2315 aaPredicted RBP0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 SPTBN2O15020 2390 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 MAP1AP78559 2803 aaPredicted RBP0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 COL12A1Q99715 3063 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 C5orf42Q9H799 3197 aa0.26□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 LRBAP50851 2863 aa0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 NIPBLQ6KC79 2804 aaeCLIP0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 PLCE1Q9P212 2302 aa0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 FMN2Q9NZ56 1722 aa0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 FAT4Q6V0I7 4981 aa0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 A0A087WVE0 104 aa0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 F2Z2F3 143 aa0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 TRAPPC2P0DI81 140 aa0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 TRAPPC2BP0DI82 140 aa0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 SPINK7P58062 85 aa0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 TMEM263Q8WUH6 116 aaKnown RBP0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 PRR15LQ9BU68 103 aa0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 UBE2D4Q9Y2X8 147 aa0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 ARL2-SNX15V9GYD0 113 aa0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 ZFHX4Q86UP3 3567 aa0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 RNF213Q63HN8 5207 aa0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.25□□□□□ -2.373e-7■■■□□ 17.8
NPHP3-ACAD11-202ENST00000632629 URB1O60287 2271 aaKnown RBP0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 RELNP78509 3460 aa0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 UNC80Q8N2C7 3258 aa0.25□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 HTTP42858 3142 aa0.24□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 HECTD4Q9Y4D8 3996 aa0.24□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 NHSQ6T4R5 1651 aa0.24□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 ITPR2Q14571 2701 aa0.24□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 CTXND1A0A1B0GTU2 59 aa0.24□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 PRH1P02810 166 aa0.24□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 GCHFRP30047 84 aa0.24□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 KRTAP21-1Q3LI58 79 aa0.24□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 TMEM170BQ5T4T1 132 aa0.24□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 SFTA2Q6UW10 78 aa0.24□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 PRO1933Q9H354 126 aa0.24□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 CFAP54Q96N23 3096 aa0.24□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 NF1P21359 2839 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 SZT2Q5T011 3432 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 ABCC1P33527 1531 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 LAMA3Q16787 3333 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 WNK1Q9H4A3 2382 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 LINC00959A0A1B0GUT2 108 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 ZNF815PA8K554 130 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 F8WEM9 126 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 UQCRHP07919 91 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 ARMS2P0C7Q2 107 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 PSMG4Q5JS54 123 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 Q6JHZ5 121 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 CNFNQ9BYD5 112 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 PSENENQ9NZ42 101 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 SPTA1P02549 2419 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 DCHS1Q96JQ0 3298 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 LRRC7Q96NW7 1537 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 DNAH3Q8TD57 4116 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 CENPFP49454 3210 aa0.23□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 NKTRP30414 1462 aaKnown RBP0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 FRYLO94915 3013 aa0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 C4AP0C0L4 1744 aa0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 C4BP0C0L5 1744 aa0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 TJP1Q07157 1748 aa0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 RICTORQ6R327 1708 aa0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 NRAPQ86VF7 1730 aa0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 TNRC6CQ9HCJ0 1690 aaKnown RBP0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 SPTBN1Q01082 2364 aaKnown RBP0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 UQCRHLA0A096LP55 91 aa0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 TRBV7-4A0A0J9YYF1 115 aa0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 M0R3E3 92 aa0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 HMGN2P05204 90 aaKnown RBP0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 HMGN3Q15651 99 aa0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 PMCHL1Q16048 86 aa0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 SSBP3-AS1Q7Z2R9 100 aa0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 SMR3AQ99954 134 aa0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 ABCA9Q8IUA7 1624 aa0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 APC2O95996 2303 aa0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 NWD1Q149M9 1564 aa0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 USF3Q68DE3 2245 aa0.22□□□□□ -2.37
NPHP3-ACAD11-202ENST00000632629 TRBV6-1A0A0K0K1D8 114 aa0.21□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 C7orf77A4D0Y5 90 aa0.21□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 H0Y9P7 68 aa0.21□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 FAUP35544 74 aaKnown RBP0.21□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 ETDBQ3ZM63 59 aa0.21□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 NMSQ5H8A3 153 aa0.21□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 UBE2DNLQ8IWF7 75 aa0.21□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 RABAC1Q9UI14 185 aa0.21□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 CSPG4Q6UVK1 2322 aa0.21□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 DNHD1Q96M86 4753 aa0.21□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 DOPEY2Q9Y3R5 2298 aa0.21□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 DMXL2Q8TDJ6 3036 aa0.21□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 TNCP24821 2201 aa0.21□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 HMCN2Q8NDA2 5059 aa0.21□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 BRCA2P51587 3418 aa0.2□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 URB2Q14146 1524 aaKnown RBP0.2□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 GOLGA4Q13439 2230 aaKnown RBP0.2□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 A0A1B0GWA3 101 aa0.2□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 H3BQF6 201 aa0.2□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 Q5VSD8 79 aa0.2□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 C6orf201Q7Z4U5 140 aa0.2□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 FDCSPQ8NFU4 85 aa0.2□□□□□ -2.38
NPHP3-ACAD11-202ENST00000632629 S100A16Q96FQ6 103 aaKnown RBP0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms