RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 KRTAP9-3Q9BYQ3 159 aa3.19□□□□□ -1.9
LINC00550-201ENST00000629293 COX6CP09669 75 aa3.18□□□□□ -1.9
LINC00550-201ENST00000629293 COX7B2Q8TF08 81 aa3.18□□□□□ -1.9
LINC00550-201ENST00000629293 CLEC2BQ92478 149 aa3.18□□□□□ -1.9
LINC00550-201ENST00000629293 MT-ATP8P03928 68 aa3.18□□□□□ -1.9
LINC00550-201ENST00000629293 TMEM262E9PQX1 116 aa3.18□□□□□ -1.9
LINC00550-201ENST00000629293 COX7A2LO14548 114 aa3.18□□□□□ -1.9
LINC00550-201ENST00000629293 MEIG1Q5JSS6 88 aa3.18□□□□□ -1.9
LINC00550-201ENST00000629293 C2orf82Q6UX34 121 aa3.17□□□□□ -1.9
LINC00550-201ENST00000629293 UBE2WQ96B02 151 aa3.17□□□□□ -1.9
LINC00550-201ENST00000629293 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
LINC00550-201ENST00000629293 TEX49A0A1B0GTD5 131 aa3.17□□□□□ -1.9
LINC00550-201ENST00000629293 A0A1B0GUV1 79 aa3.17□□□□□ -1.9
LINC00550-201ENST00000629293 SMIM29Q86T20 159 aa3.17□□□□□ -1.9
LINC00550-201ENST00000629293 CHCHD5Q9BSY4 110 aa3.17□□□□□ -1.9
LINC00550-201ENST00000629293 IGKV2-28A0A075B6P5 120 aa3.16□□□□□ -1.9
LINC00550-201ENST00000629293 LINC00959A0A1B0GUT2 108 aa3.16□□□□□ -1.9
LINC00550-201ENST00000629293 IGKV2D-28P01615 120 aa3.16□□□□□ -1.9
LINC00550-201ENST00000629293 LINC01561Q8N1V8 128 aa3.16□□□□□ -1.9
LINC00550-201ENST00000629293 IBA57-AS1B1ANH7 110 aa3.16□□□□□ -1.9
LINC00550-201ENST00000629293 MIR7-3HGQ8N6C7 128 aa3.16□□□□□ -1.9
LINC00550-201ENST00000629293 Q8N814 137 aa3.16□□□□□ -1.9
LINC00550-201ENST00000629293 FAM240AA0A1B0GVK7 77 aa3.16□□□□□ -1.9
LINC00550-201ENST00000629293 TRACP01848 142 aa3.16□□□□□ -1.9
LINC00550-201ENST00000629293 RPL28P46779 137 aaKnown RBP3.16□□□□□ -1.9
LINC00550-201ENST00000629293 SEC61GP60059 68 aa3.16□□□□□ -1.9
LINC00550-201ENST00000629293 RNF213Q63HN8 5207 aa3.15□□□□□ -1.9
LINC00550-201ENST00000629293 TRAV13-2A0A0B4J235 113 aa3.15□□□□□ -1.9
LINC00550-201ENST00000629293 LINC00337Q8N6G1 96 aa3.15□□□□□ -1.9
LINC00550-201ENST00000629293 C22orf24Q9Y442 160 aa3.15□□□□□ -1.9
LINC00550-201ENST00000629293 TRAV8-4A0A0B4J246 113 aa3.15□□□□□ -1.91
LINC00550-201ENST00000629293 LRCOL1A6NCL2 159 aa3.15□□□□□ -1.91
LINC00550-201ENST00000629293 IGKV2D-24A0A075B6R9 120 aa3.15□□□□□ -1.91
LINC00550-201ENST00000629293 IGKV3OR2-268A0A0C4DH90 116 aa3.15□□□□□ -1.91
LINC00550-201ENST00000629293 SCXQ7RTU7 201 aa3.15□□□□□ -1.91
LINC00550-201ENST00000629293 Q8IZM0 81 aa3.15□□□□□ -1.91
LINC00550-201ENST00000629293 SND1-IT1Q9HBX3 110 aa3.15□□□□□ -1.91
LINC00550-201ENST00000629293 HMCN2Q8NDA2 5059 aa3.15□□□□□ -1.91
LINC00550-201ENST00000629293 A0A1B0GV72 72 aa3.14□□□□□ -1.91
LINC00550-201ENST00000629293 CRPP02741 224 aa3.14□□□□□ -1.91
LINC00550-201ENST00000629293 LCE5AQ5TCM9 118 aa3.14□□□□□ -1.91
LINC00550-201ENST00000629293 C5orf38Q86SI9 138 aa3.14□□□□□ -1.91
LINC00550-201ENST00000629293 TOMM7Q9P0U1 55 aa3.14□□□□□ -1.91
LINC00550-201ENST00000629293 LINC01556Q5JQF7 62 aa3.14□□□□□ -1.91
LINC00550-201ENST00000629293 Q6ZRP5 223 aa3.14□□□□□ -1.91
LINC00550-201ENST00000629293 PRAC1Q96KF2 57 aa3.14□□□□□ -1.91
LINC00550-201ENST00000629293 SS18Q15532 418 aa3.13□□□□□ -1.91
LINC00550-201ENST00000629293 Q6Q795 121 aa3.13□□□□□ -1.91
LINC00550-201ENST00000629293 XCL1P47992 114 aa3.13□□□□□ -1.91
LINC00550-201ENST00000629293 LINC00158P58513 81 aa3.13□□□□□ -1.91
LINC00550-201ENST00000629293 CKS1BP61024 79 aa3.13□□□□□ -1.91
LINC00550-201ENST00000629293 KIAA0087Q14695 138 aa3.13□□□□□ -1.91
LINC00550-201ENST00000629293 SMIM11BQ8TCY0 68 aa3.13□□□□□ -1.91
LINC00550-201ENST00000629293 KLK12Q9UKR0 248 aa3.13□□□□□ -1.91
LINC00550-201ENST00000629293 LELP1Q5T871 98 aa3.12□□□□□ -1.91
LINC00550-201ENST00000629293 SDIM1Q6ZPB5 146 aa3.12□□□□□ -1.91
LINC00550-201ENST00000629293 DPH3Q96FX2 82 aa3.12□□□□□ -1.91
LINC00550-201ENST00000629293 CLPSL2Q6UWE3 100 aa3.12□□□□□ -1.91
LINC00550-201ENST00000629293 KRTAP29-1A8MX34 341 aaPredicted RBP3.12□□□□□ -1.91
LINC00550-201ENST00000629293 SNCGO76070 127 aa3.12□□□□□ -1.91
LINC00550-201ENST00000629293 BAALC-AS2P0C853 105 aa3.12□□□□□ -1.91
LINC00550-201ENST00000629293 PFN2P35080 140 aa3.12□□□□□ -1.91
LINC00550-201ENST00000629293 CXCL5P42830 114 aa3.12□□□□□ -1.91
LINC00550-201ENST00000629293 C6orf226Q5I0X4 101 aa3.12□□□□□ -1.91
LINC00550-201ENST00000629293 LINC00269Q8N2A0 174 aa3.12□□□□□ -1.91
LINC00550-201ENST00000629293 CIRBP-AS1Q8TBR5 109 aa3.12□□□□□ -1.91
LINC00550-201ENST00000629293 LRP2P98164 4655 aa3.11□□□□□ -1.91
LINC00550-201ENST00000629293 A0A087WYN8 130 aa3.11□□□□□ -1.91
LINC00550-201ENST00000629293 H0YGX0 51 aa3.11□□□□□ -1.91
LINC00550-201ENST00000629293 ACYP1P07311 99 aa3.11□□□□□ -1.91
LINC00550-201ENST00000629293 COX17Q14061 63 aa3.11□□□□□ -1.91
LINC00550-201ENST00000629293 CHCHD10Q8WYQ3 142 aaPredicted RBP3.11□□□□□ -1.91
LINC00550-201ENST00000629293 OBSCN-AS1Q96MR7 158 aa3.11□□□□□ -1.91
LINC00550-201ENST00000629293 FAT3Q8TDW7 4589 aa3.11□□□□□ -1.91
LINC00550-201ENST00000629293 TRBV7-7A0A0K0K1E9 115 aa3.11□□□□□ -1.91
LINC00550-201ENST00000629293 NDUFC2O95298 119 aa3.11□□□□□ -1.91
LINC00550-201ENST00000629293 REG3AQ06141 175 aa3.11□□□□□ -1.91
LINC00550-201ENST00000629293 LINC00167Q96N53 147 aa3.1□□□□□ -1.91
LINC00550-201ENST00000629293 PRR34Q9NV39 138 aa3.1□□□□□ -1.91
LINC00550-201ENST00000629293 SMCR5Q8TEV8 140 aa3.1□□□□□ -1.91
LINC00550-201ENST00000629293 ANGP03950 147 aaKnown RBP3.1□□□□□ -1.91
LINC00550-201ENST00000629293 NDUFV3P56181 108 aaKnown RBP3.1□□□□□ -1.91
LINC00550-201ENST00000629293 RPL37AP61513 92 aaKnown RBP3.1□□□□□ -1.91
LINC00550-201ENST00000629293 RMI2Q96E14 147 aa3.1□□□□□ -1.91
LINC00550-201ENST00000629293 LINC01547P58512 204 aaPredicted RBP3.09□□□□□ -1.91
LINC00550-201ENST00000629293 Q6ZSA8 131 aa3.09□□□□□ -1.91
LINC00550-201ENST00000629293 Q8NDZ9 215 aa3.09□□□□□ -1.91
LINC00550-201ENST00000629293 A0A087X002 238 aa3.09□□□□□ -1.91
LINC00550-201ENST00000629293 C9orf129Q5T035 196 aaKnown RBP3.09□□□□□ -1.91
LINC00550-201ENST00000629293 ANAPC13Q9BS18 74 aa3.09□□□□□ -1.91
LINC00550-201ENST00000629293 IGLV10-54A0A075B6I4 117 aa3.09□□□□□ -1.92
LINC00550-201ENST00000629293 A0A1B0GX51 115 aa3.09□□□□□ -1.92
LINC00550-201ENST00000629293 DNAH8Q96JB1 4490 aa3.09□□□□□ -1.92
LINC00550-201ENST00000629293 DNAL4O96015 105 aa3.08□□□□□ -1.92
LINC00550-201ENST00000629293 ENHOQ6UWT2 76 aa3.08□□□□□ -1.92
LINC00550-201ENST00000629293 LINC00643Q86TS7 51 aa3.08□□□□□ -1.92
LINC00550-201ENST00000629293 IMUPQ9GZP8 106 aa3.08□□□□□ -1.92
LINC00550-201ENST00000629293 GVQW2A0A096LPI5 108 aaPredicted RBP3.08□□□□□ -1.92
LINC00550-201ENST00000629293 SPAG11BQ08648 103 aa3.08□□□□□ -1.92
LINC00550-201ENST00000629293 C9orf116Q5BN46 136 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms