RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 NDUFC1O43677 76 aa-0.56□□□□□ -2.5
SCARNA4-202ENST00000625402 PMCHL1Q16048 86 aa-0.56□□□□□ -2.5
SCARNA4-202ENST00000625402 PSMG4Q5JS54 123 aa-0.56□□□□□ -2.5
SCARNA4-202ENST00000625402 RELNP78509 3460 aa-0.56□□□□□ -2.5
SCARNA4-202ENST00000625402 KALRNO60229 2985 aa-0.56□□□□□ -2.5
SCARNA4-202ENST00000625402 SACSQ9NZJ4 4579 aa-0.57□□□□□ -2.5
SCARNA4-202ENST00000625402 ACACBO00763 2458 aa-0.57□□□□□ -2.5
SCARNA4-202ENST00000625402 PRDM15P57071 1507 aaPredicted RBP-0.57□□□□□ -2.5
SCARNA4-202ENST00000625402 H3BQF6 201 aa-0.57□□□□□ -2.5
SCARNA4-202ENST00000625402 ARMS2P0C7Q2 107 aa-0.57□□□□□ -2.5
SCARNA4-202ENST00000625402 S100A10P60903 97 aa-0.57□□□□□ -2.5
SCARNA4-202ENST00000625402 WFDC13Q8IUB5 93 aa-0.57□□□□□ -2.5
SCARNA4-202ENST00000625402 MRPL34Q9BQ48 92 aaKnown RBP-0.57□□□□□ -2.5
SCARNA4-202ENST00000625402 PSENENQ9NZ42 101 aa-0.57□□□□□ -2.5
SCARNA4-202ENST00000625402 NKTRP30414 1462 aaKnown RBP-0.57□□□□□ -2.5
SCARNA4-202ENST00000625402 MLH3Q9UHC1 1453 aa-0.57□□□□□ -2.5
SCARNA4-202ENST00000625402 REV3LO60673 3130 aa-0.57□□□□□ -2.5
SCARNA4-202ENST00000625402 APOBP04114 4563 aaKnown RBP-0.57□□□□□ -2.5
SCARNA4-202ENST00000625402 CEP295Q9C0D2 2601 aa-0.57□□□□□ -2.5
SCARNA4-202ENST00000625402 LAMA3Q16787 3333 aa-0.58□□□□□ -2.5
SCARNA4-202ENST00000625402 NRXN1Q9ULB1 1477 aa-0.58□□□□□ -2.5
SCARNA4-202ENST00000625402 MPC2O95563 127 aa-0.58□□□□□ -2.5
SCARNA4-202ENST00000625402 DEFB1P60022 68 aa-0.58□□□□□ -2.5
SCARNA4-202ENST00000625402 COX6B2Q6YFQ2 88 aa-0.58□□□□□ -2.5
SCARNA4-202ENST00000625402 PMCHL2Q9BQD1 86 aa-0.58□□□□□ -2.5
SCARNA4-202ENST00000625402 CICQ96RK0 1608 aaPredicted RBP-0.58□□□□□ -2.5
SCARNA4-202ENST00000625402 MYO9AB2RTY4 2548 aa-0.58□□□□□ -2.5
SCARNA4-202ENST00000625402 DNAH8Q96JB1 4490 aa-0.58□□□□□ -2.5
SCARNA4-202ENST00000625402 FRYQ5TBA9 3013 aa-0.58□□□□□ -2.5
SCARNA4-202ENST00000625402 ITPR1Q14643 2758 aa-0.58□□□□□ -2.5
SCARNA4-202ENST00000625402 ANKRD36BQ8N2N9 1353 aa-0.58□□□□□ -2.5
SCARNA4-202ENST00000625402 A0A0C4DFX4 3053 aa-0.58□□□□□ -2.5
SCARNA4-202ENST00000625402 LRBAP50851 2863 aa-0.59□□□□□ -2.5
SCARNA4-202ENST00000625402 SPTY2D1-AS1A0A0U1RR47 76 aa-0.59□□□□□ -2.5
SCARNA4-202ENST00000625402 MT1HL1P0DM35 61 aa-0.59□□□□□ -2.5
SCARNA4-202ENST00000625402 GNGT1P63211 74 aa-0.59□□□□□ -2.5
SCARNA4-202ENST00000625402 LELP1Q5T871 98 aa-0.59□□□□□ -2.5
SCARNA4-202ENST00000625402 TRRAPQ9Y4A5 3859 aa-0.59□□□□□ -2.5
SCARNA4-202ENST00000625402 TLN2Q9Y4G6 2542 aa-0.6□□□□□ -2.5
SCARNA4-202ENST00000625402 EDC4Q6P2E9 1401 aaKnown RBP-0.6□□□□□ -2.51
SCARNA4-202ENST00000625402 H0YAA0 97 aa-0.6□□□□□ -2.51
SCARNA4-202ENST00000625402 SERP2Q8N6R1 65 aa-0.6□□□□□ -2.51
SCARNA4-202ENST00000625402 COL14A1Q05707 1796 aaKnown RBP-0.6□□□□□ -2.51
SCARNA4-202ENST00000625402 TARBP1Q13395 1621 aaKnown RBP-0.6□□□□□ -2.51
SCARNA4-202ENST00000625402 LRRC37AA6NMS7 1700 aa-0.61□□□□□ -2.51
SCARNA4-202ENST00000625402 COL6A5A8TX70 2615 aa-0.61□□□□□ -2.51
SCARNA4-202ENST00000625402 CFAP46Q8IYW2 2715 aa-0.61□□□□□ -2.51
SCARNA4-202ENST00000625402 CELSR3Q9NYQ7 3312 aa-0.61□□□□□ -2.51
SCARNA4-202ENST00000625402 UQCRHP07919 91 aa-0.61□□□□□ -2.51
SCARNA4-202ENST00000625402 RBP2P50120 134 aa-0.61□□□□□ -2.51
SCARNA4-202ENST00000625402 MT1XP80297 61 aa-0.61□□□□□ -2.51
SCARNA4-202ENST00000625402 AP4S1Q9Y587 144 aa-0.61□□□□□ -2.51
SCARNA4-202ENST00000625402 CHD7Q9P2D1 2997 aa-0.61□□□□□ -2.51
SCARNA4-202ENST00000625402 DYNC1H1Q14204 4646 aaKnown RBP-0.61□□□□□ -2.51
SCARNA4-202ENST00000625402 TRBV7-7A0A0K0K1E9 115 aa-0.62□□□□□ -2.51
SCARNA4-202ENST00000625402 ATOX1O00244 68 aa-0.62□□□□□ -2.51
SCARNA4-202ENST00000625402 C3orf79P0CE67 100 aa-0.62□□□□□ -2.51
SCARNA4-202ENST00000625402 RPL38P63173 70 aaKnown RBP-0.62□□□□□ -2.51
SCARNA4-202ENST00000625402 DEFB110Q30KQ9 67 aa-0.62□□□□□ -2.51
SCARNA4-202ENST00000625402 ALKAL2Q6UX46 152 aa-0.62□□□□□ -2.51
SCARNA4-202ENST00000625402 TCEAL7Q9BRU2 100 aa-0.62□□□□□ -2.51
SCARNA4-202ENST00000625402 S4R3F8 94 aa-0.62□□□□□ -2.51
SCARNA4-202ENST00000625402 ABCA13Q86UQ4 5058 aa-0.62□□□□□ -2.51
SCARNA4-202ENST00000625402 SHPRHQ149N8 1683 aa-0.62□□□□□ -2.51
SCARNA4-202ENST00000625402 KIAA1551Q9HCM1 1747 aa-0.63□□□□□ -2.51
SCARNA4-202ENST00000625402 SPTAN1Q13813 2472 aaKnown RBP-0.63□□□□□ -2.51
SCARNA4-202ENST00000625402 PRLHP81277 87 aa-0.63□□□□□ -2.51
SCARNA4-202ENST00000625402 NCMAPQ5T1S8 102 aa-0.63□□□□□ -2.51
SCARNA4-202ENST00000625402 UBR3Q6ZT12 1888 aa-0.63□□□□□ -2.51
SCARNA4-202ENST00000625402 SMG1Q96Q15 3661 aaKnown RBP-0.64□□□□□ -2.51
SCARNA4-202ENST00000625402 C5orf42Q9H799 3197 aa-0.64□□□□□ -2.51
SCARNA4-202ENST00000625402 COL12A1Q99715 3063 aa-0.64□□□□□ -2.51
SCARNA4-202ENST00000625402 BCORQ6W2J9 1755 aa-0.64□□□□□ -2.51
SCARNA4-202ENST00000625402 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.64□□□□□ -2.51
SCARNA4-202ENST00000625402 FAUP35544 74 aaKnown RBP-0.64□□□□□ -2.51
SCARNA4-202ENST00000625402 UBE2D4Q9Y2X8 147 aa-0.64□□□□□ -2.51
SCARNA4-202ENST00000625402 SRCAPQ6ZRS2 3230 aa-0.64□□□□□ -2.51
SCARNA4-202ENST00000625402 CSMD1Q96PZ7 3565 aa-0.64□□□□□ -2.51
SCARNA4-202ENST00000625402 KIF20BQ96Q89 1820 aa-0.64□□□□□ -2.51
SCARNA4-202ENST00000625402 MAP3K1Q13233 1512 aa-0.64□□□□□ -2.51
SCARNA4-202ENST00000625402 BPTFQ12830 3046 aa-0.64□□□□□ -2.51
SCARNA4-202ENST00000625402 SPTBN5Q9NRC6 3674 aaKnown RBP-0.65□□□□□ -2.51
SCARNA4-202ENST00000625402 ITPR2Q14571 2701 aa-0.65□□□□□ -2.51
SCARNA4-202ENST00000625402 RGPD8O14715 1765 aaPredicted RBP-0.65□□□□□ -2.51
SCARNA4-202ENST00000625402 RGPD2P0DJD1 1756 aa-0.65□□□□□ -2.51
SCARNA4-202ENST00000625402 RGPD5Q99666 1765 aa-0.65□□□□□ -2.51
SCARNA4-202ENST00000625402 RAPGEF2Q9Y4G8 1499 aa-0.65□□□□□ -2.51
SCARNA4-202ENST00000625402 MT1EP04732 61 aa-0.65□□□□□ -2.51
SCARNA4-202ENST00000625402 IGLC2P0DOY2 106 aa-0.65□□□□□ -2.51
SCARNA4-202ENST00000625402 IGLC3P0DOY3 106 aa-0.65□□□□□ -2.51
SCARNA4-202ENST00000625402 HMGN3Q15651 99 aa-0.65□□□□□ -2.51
SCARNA4-202ENST00000625402 KRTAP19-5Q3LI72 72 aa-0.65□□□□□ -2.51
SCARNA4-202ENST00000625402 COL5A1-AS1Q5SY13 56 aa-0.65□□□□□ -2.51
SCARNA4-202ENST00000625402 CLPSL2Q6UWE3 100 aa-0.65□□□□□ -2.51
SCARNA4-202ENST00000625402 ACBD7Q8N6N7 88 aa-0.65□□□□□ -2.51
SCARNA4-202ENST00000625402 DPY30Q9C005 99 aa-0.65□□□□□ -2.51
SCARNA4-202ENST00000625402 MON2Q7Z3U7 1717 aa-0.66□□□□□ -2.51
SCARNA4-202ENST00000625402 SPENQ96T58 3664 aaKnown RBP-0.66□□□□□ -2.51
SCARNA4-202ENST00000625402 F8WEM9 126 aa-0.66□□□□□ -2.52
SCARNA4-202ENST00000625402 NDUFA3O95167 84 aa-0.66□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms