RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 NPC2P61916 151 aa7.8□□□□□ -1.16
PNKP-218ENST00000625299 RPL37P61927 97 aaKnown RBP7.8□□□□□ -1.16
PNKP-218ENST00000625299 SLC25A34Q6PIV7 304 aa7.8□□□□□ -1.16
PNKP-218ENST00000625299 UQCC3Q6UW78 93 aa7.8□□□□□ -1.16
PNKP-218ENST00000625299 COMMD7Q86VX2 200 aa7.8□□□□□ -1.16
PNKP-218ENST00000625299 HINT1P49773 126 aaPredicted RBP7.79□□□□□ -1.16
PNKP-218ENST00000625299 CLLU1Q5K131 121 aa7.79□□□□□ -1.16
PNKP-218ENST00000625299 LAMTOR3Q9UHA4 124 aa7.79□□□□□ -1.16
PNKP-218ENST00000625299 C5orf52A6NGY3 159 aa7.78□□□□□ -1.16
PNKP-218ENST00000625299 NDUFC2O95298 119 aa7.78□□□□□ -1.16
PNKP-218ENST00000625299 SSPOA2VEC9 5147 aa7.77□□□□□ -1.16
PNKP-218ENST00000625299 USH2AO75445 5202 aa7.77□□□□□ -1.17
PNKP-218ENST00000625299 LEPROTO15243 131 aa7.77□□□□□ -1.17
PNKP-218ENST00000625299 SPRR1BP22528 89 aa7.77□□□□□ -1.17
PNKP-218ENST00000625299 NDUFA5Q16718 116 aa7.76□□□□□ -1.17
PNKP-218ENST00000625299 Q1RN00 199 aa7.76□□□□□ -1.17
PNKP-218ENST00000625299 Q6Q795 121 aa7.76□□□□□ -1.17
PNKP-218ENST00000625299 RHEBQ15382 184 aa7.75□□□□□ -1.17
PNKP-218ENST00000625299 J3QQQ9 107 aa7.74□□□□□ -1.17
PNKP-218ENST00000625299 SOSTDC1Q6X4U4 206 aa7.74□□□□□ -1.17
PNKP-218ENST00000625299 DEFB105AQ8NG35 78 aa7.74□□□□□ -1.17
PNKP-218ENST00000625299 CHCHD1Q96BP2 118 aaKnown RBP7.74□□□□□ -1.17
PNKP-218ENST00000625299 PRO1933Q9H354 126 aa7.74□□□□□ -1.17
PNKP-218ENST00000625299 EIF4EBP3O60516 100 aaPredicted RBP7.73□□□□□ -1.17
PNKP-218ENST00000625299 LGALS3P17931 250 aaKnown RBP7.73□□□□□ -1.17
PNKP-218ENST00000625299 CD164Q04900 197 aa7.73□□□□□ -1.17
PNKP-218ENST00000625299 C1orf195Q5TG92 126 aa7.73□□□□□ -1.17
PNKP-218ENST00000625299 DHRS4-AS1Q9P1J3 65 aa7.73□□□□□ -1.17
PNKP-218ENST00000625299 OR13C6PQ8NH95 151 aa7.72□□□□□ -1.17
PNKP-218ENST00000625299 CBY1Q9Y3M2 126 aa7.72□□□□□ -1.17
PNKP-218ENST00000625299 NMUP48645 174 aa7.71□□□□□ -1.18
PNKP-218ENST00000625299 HERVK_113P61574 105 aa7.71□□□□□ -1.18
PNKP-218ENST00000625299 TAL2Q16559 108 aa7.71□□□□□ -1.18
PNKP-218ENST00000625299 HSBP1O75506 76 aa7.7□□□□□ -1.18
PNKP-218ENST00000625299 A0A0G2JQZ4 141 aa7.69□□□□□ -1.18
PNKP-218ENST00000625299 ADAMTSL4-AS1Q5T5F5 129 aa7.69□□□□□ -1.18
PNKP-218ENST00000625299 PLNP26678 52 aa7.68□□□□□ -1.18
PNKP-218ENST00000625299 Q5XG85 94 aa7.68□□□□□ -1.18
PNKP-218ENST00000625299 SMIM29Q86T20 159 aa7.68□□□□□ -1.18
PNKP-218ENST00000625299 COX7BP24311 80 aa7.67□□□□□ -1.18
PNKP-218ENST00000625299 AKR1D1P51857 326 aa7.67□□□□□ -1.18
PNKP-218ENST00000625299 PMCHL2Q9BQD1 86 aa7.67□□□□□ -1.18
PNKP-218ENST00000625299 A0A0J9YXY3 114 aa7.66□□□□□ -1.18
PNKP-218ENST00000625299 TEX49A0A1B0GTD5 131 aa7.66□□□□□ -1.18
PNKP-218ENST00000625299 CFC1P0CG37 223 aa7.66□□□□□ -1.18
PNKP-218ENST00000625299 C10orf91Q5T1B1 145 aa7.66□□□□□ -1.18
PNKP-218ENST00000625299 DPM2O94777 84 aa7.65□□□□□ -1.18
PNKP-218ENST00000625299 ELOF1P60002 83 aaKnown RBP7.65□□□□□ -1.18
PNKP-218ENST00000625299 SPANXCQ9NY87 97 aa7.65□□□□□ -1.18
PNKP-218ENST00000625299 FCGBPQ9Y6R7 5405 aaPredicted RBP7.64□□□□□ -1.19
PNKP-218ENST00000625299 LEPROTL1O95214 131 aa7.64□□□□□ -1.19
PNKP-218ENST00000625299 C6orf99Q4VX62 202 aa7.64□□□□□ -1.19
PNKP-218ENST00000625299 IGKCP01834 107 aa7.63□□□□□ -1.19
PNKP-218ENST00000625299 LINC00308Q8TCZ7 52 aa7.62□□□□□ -1.19
PNKP-218ENST00000625299 SPANXDQ9BXN6 97 aa7.62□□□□□ -1.19
PNKP-218ENST00000625299 TCL1BO95988 128 aa7.61□□□□□ -1.19
PNKP-218ENST00000625299 ATP11AUNQ6ZP68 121 aa7.61□□□□□ -1.19
PNKP-218ENST00000625299 KRTAP9-8Q9BYQ0 159 aa7.61□□□□□ -1.19
PNKP-218ENST00000625299 S100A1P23297 94 aa7.6□□□□□ -1.19
PNKP-218ENST00000625299 APOC3P02656 99 aa7.59□□□□□ -1.19
PNKP-218ENST00000625299 FABP4P15090 132 aa7.59□□□□□ -1.19
PNKP-218ENST00000625299 PCP2Q8IVA1 136 aa7.59□□□□□ -1.19
PNKP-218ENST00000625299 SLC7A5P1Q8MH63 180 aa7.59□□□□□ -1.19
PNKP-218ENST00000625299 HSPB8Q9UJY1 196 aa7.58□□□□□ -1.2
PNKP-218ENST00000625299 LITAFQ99732 161 aa7.57□□□□□ -1.2
PNKP-218ENST00000625299 E9PLD3 99 aa7.56□□□□□ -1.2
PNKP-218ENST00000625299 SERF1AO75920 110 aa7.56□□□□□ -1.2
PNKP-218ENST00000625299 OBSCN-AS1Q96MR7 158 aa7.56□□□□□ -1.2
PNKP-218ENST00000625299 IGLV5-48A0A075B6I7 105 aa7.55□□□□□ -1.2
PNKP-218ENST00000625299 SNAPINO95295 136 aa7.55□□□□□ -1.2
PNKP-218ENST00000625299 LINC00310P59036 64 aa7.55□□□□□ -1.2
PNKP-218ENST00000625299 C20orf202A1L168 122 aa7.54□□□□□ -1.2
PNKP-218ENST00000625299 Q75L30 129 aa7.54□□□□□ -1.2
PNKP-218ENST00000625299 KRTAP19-1Q8IUB9 90 aa7.54□□□□□ -1.2
PNKP-218ENST00000625299 LINC00518Q8N0U6 118 aa7.54□□□□□ -1.2
PNKP-218ENST00000625299 SVBPQ8N300 66 aa7.53□□□□□ -1.2
PNKP-218ENST00000625299 YPEL4Q96NS1 127 aa7.53□□□□□ -1.2
PNKP-218ENST00000625299 TRBV7-6A0A0J9YX20 115 aa7.52□□□□□ -1.21
PNKP-218ENST00000625299 A0A1B0GWB2 263 aa7.52□□□□□ -1.21
PNKP-218ENST00000625299 TIMM17BO60830 172 aa7.52□□□□□ -1.21
PNKP-218ENST00000625299 ZNF815PA8K554 130 aa7.5□□□□□ -1.21
PNKP-218ENST00000625299 F8WEM9 126 aa7.5□□□□□ -1.21
PNKP-218ENST00000625299 TRGC2P03986 189 aa7.5□□□□□ -1.21
PNKP-218ENST00000625299 TRBV20-1A0A075B6N2 111 aa7.48□□□□□ -1.21
PNKP-218ENST00000625299 A6NDN8 102 aa7.48□□□□□ -1.21
PNKP-218ENST00000625299 MT2AP02795 61 aa7.48□□□□□ -1.21
PNKP-218ENST00000625299 MACF1Q9UPN3 7388 aaKnown RBP7.47□□□□□ -1.21
PNKP-218ENST00000625299 SYNE2Q8WXH0 6885 aaKnown RBP7.47□□□□□ -1.21
PNKP-218ENST00000625299 Q96NJ1 140 aa7.47□□□□□ -1.21
PNKP-218ENST00000625299 TTTY13Q9BZ97 58 aa7.47□□□□□ -1.21
PNKP-218ENST00000625299 LCE2BO14633 110 aa7.46□□□□□ -1.22
PNKP-218ENST00000625299 NHP2Q9NX24 153 aaKnown RBP7.46□□□□□ -1.22
PNKP-218ENST00000625299 TRBV7-7A0A0K0K1E9 115 aa7.45□□□□□ -1.22
PNKP-218ENST00000625299 A4D1N5 150 aa7.44□□□□□ -1.22
PNKP-218ENST00000625299 MT1FP04733 61 aa7.43□□□□□ -1.22
PNKP-218ENST00000625299 CLEC2BQ92478 149 aa7.42□□□□□ -1.22
PNKP-218ENST00000625299 FAM236DA0A1B0GTK5 79 aa7.41□□□□□ -1.22
PNKP-218ENST00000625299 SYS1-DBNDD2H3BUS1 97 aa7.41□□□□□ -1.22
PNKP-218ENST00000625299 FAM236CP0DP71 79 aa7.41□□□□□ -1.22
PNKP-218ENST00000625299 Q6JHZ5 121 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms