RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 PRO1854Q9UHT4 67 aa7.89□□□□□ -1.15
PNKP-217ENST00000625216 HMCN2Q8NDA2 5059 aa7.88□□□□□ -1.15
PNKP-217ENST00000625216 PLA2G2DQ9UNK4 145 aa7.88□□□□□ -1.15
PNKP-217ENST00000625216 TRAV13-2A0A0B4J235 113 aa7.87□□□□□ -1.15
PNKP-217ENST00000625216 H7C2G1 150 aa7.87□□□□□ -1.15
PNKP-217ENST00000625216 IGLV5-37A0A075B6J1 123 aa7.86□□□□□ -1.15
PNKP-217ENST00000625216 TRBV10-2A0A0K0K1G8 114 aa7.86□□□□□ -1.15
PNKP-217ENST00000625216 C9orf118A6NHY6 69 aa7.86□□□□□ -1.15
PNKP-217ENST00000625216 FAM19A5Q7Z5A7 132 aaPredicted RBP7.86□□□□□ -1.15
PNKP-217ENST00000625216 A0A1W2PNN7 141 aa7.85□□□□□ -1.15
PNKP-217ENST00000625216 H3BUT2 72 aa7.85□□□□□ -1.15
PNKP-217ENST00000625216 OR13C6PQ8NH95 151 aa7.85□□□□□ -1.15
PNKP-217ENST00000625216 M0R378 163 aa7.84□□□□□ -1.15
PNKP-217ENST00000625216 Q1RN00 199 aa7.84□□□□□ -1.15
PNKP-217ENST00000625216 TRBV10-3A0A0K0K1G6 114 aa7.83□□□□□ -1.16
PNKP-217ENST00000625216 IGLV6-57P01721 117 aa7.83□□□□□ -1.16
PNKP-217ENST00000625216 NKAPP1Q8N9T2 125 aa7.83□□□□□ -1.16
PNKP-217ENST00000625216 A0A1B0GV90 55 aa7.82□□□□□ -1.16
PNKP-217ENST00000625216 TRIAP1O43715 76 aa7.82□□□□□ -1.16
PNKP-217ENST00000625216 MT1HL1P0DM35 61 aa7.82□□□□□ -1.16
PNKP-217ENST00000625216 S100A7L2Q5SY68 101 aa7.82□□□□□ -1.16
PNKP-217ENST00000625216 SPINK6Q6UWN8 80 aa7.82□□□□□ -1.16
PNKP-217ENST00000625216 SMIM11BQ8TCY0 68 aa7.82□□□□□ -1.16
PNKP-217ENST00000625216 C22orf24Q9Y442 160 aa7.82□□□□□ -1.16
PNKP-217ENST00000625216 A0A1W2PPM0 123 aa7.81□□□□□ -1.16
PNKP-217ENST00000625216 GAGE10A6NGK3 116 aa7.81□□□□□ -1.16
PNKP-217ENST00000625216 M0QXV9 152 aa7.81□□□□□ -1.16
PNKP-217ENST00000625216 TMEM126AQ9H061 195 aa7.81□□□□□ -1.16
PNKP-217ENST00000625216 RPL28P46779 137 aaKnown RBP7.8□□□□□ -1.16
PNKP-217ENST00000625216 PSMB2P49721 201 aa7.79□□□□□ -1.16
PNKP-217ENST00000625216 REG3GQ6UW15 175 aa7.79□□□□□ -1.16
PNKP-217ENST00000625216 MRPL55Q7Z7F7 128 aaKnown RBP7.79□□□□□ -1.16
PNKP-217ENST00000625216 LINC01600Q96MT4 127 aa7.79□□□□□ -1.16
PNKP-217ENST00000625216 LINC00167Q96N53 147 aa7.79□□□□□ -1.16
PNKP-217ENST00000625216 TRAV23DV6A0A075B6W5 121 aa7.78□□□□□ -1.16
PNKP-217ENST00000625216 PHF5AQ7RTV0 110 aaKnown RBP7.78□□□□□ -1.16
PNKP-217ENST00000625216 TNXBP22105 4242 aa7.78□□□□□ -1.16
PNKP-217ENST00000625216 RPL37AP8A6NKH3 93 aa7.77□□□□□ -1.17
PNKP-217ENST00000625216 IGLV1-50A0A075B6I6 118 aa7.76□□□□□ -1.17
PNKP-217ENST00000625216 FABP2P12104 132 aa7.76□□□□□ -1.17
PNKP-217ENST00000625216 C6orf99Q4VX62 202 aa7.76□□□□□ -1.17
PNKP-217ENST00000625216 KRTAP11-1Q8IUC1 163 aa7.76□□□□□ -1.17
PNKP-217ENST00000625216 PSORS1C2Q9UIG4 136 aa7.76□□□□□ -1.17
PNKP-217ENST00000625216 PRYO14603 147 aa7.75□□□□□ -1.17
PNKP-217ENST00000625216 CLEC2BQ92478 149 aa7.75□□□□□ -1.17
PNKP-217ENST00000625216 KCNQ1DNQ9H478 68 aa7.75□□□□□ -1.17
PNKP-217ENST00000625216 TCL1BO95988 128 aa7.74□□□□□ -1.17
PNKP-217ENST00000625216 VAMP3Q15836 100 aa7.74□□□□□ -1.17
PNKP-217ENST00000625216 LYRM7Q5U5X0 104 aa7.74□□□□□ -1.17
PNKP-217ENST00000625216 DIRC1Q969H9 104 aa7.74□□□□□ -1.17
PNKP-217ENST00000625216 SPCS1Q9Y6A9 102 aa7.74□□□□□ -1.17
PNKP-217ENST00000625216 K7EP34 96 aa7.73□□□□□ -1.17
PNKP-217ENST00000625216 ZNF73O43830 326 aaPredicted RBP7.73□□□□□ -1.17
PNKP-217ENST00000625216 SCGB1C2P0DMR2 95 aa7.73□□□□□ -1.17
PNKP-217ENST00000625216 C1orf137Q5JT78 98 aa7.73□□□□□ -1.17
PNKP-217ENST00000625216 FAM218AQ96MZ4 157 aa7.73□□□□□ -1.17
PNKP-217ENST00000625216 COX6CP09669 75 aa7.72□□□□□ -1.17
PNKP-217ENST00000625216 SPRR1AP35321 89 aa7.72□□□□□ -1.17
PNKP-217ENST00000625216 KRTAP10-8P60410 259 aa7.72□□□□□ -1.17
PNKP-217ENST00000625216 UBE2BP63146 152 aa7.72□□□□□ -1.17
PNKP-217ENST00000625216 UBR4Q5T4S7 5183 aa7.72□□□□□ -1.17
PNKP-217ENST00000625216 CBY1Q9Y3M2 126 aa7.71□□□□□ -1.18
PNKP-217ENST00000625216 KRTAP4-16G5E9R7 235 aaPredicted RBP7.7□□□□□ -1.18
PNKP-217ENST00000625216 LST1O00453 97 aa7.7□□□□□ -1.18
PNKP-217ENST00000625216 IGLV7-43P04211 117 aa7.7□□□□□ -1.18
PNKP-217ENST00000625216 ELOF1P60002 83 aaKnown RBP7.7□□□□□ -1.18
PNKP-217ENST00000625216 H0YGX0 51 aa7.69□□□□□ -1.18
PNKP-217ENST00000625216 COX7BP24311 80 aa7.69□□□□□ -1.18
PNKP-217ENST00000625216 TRBV20-1A0A075B6N2 111 aa7.68□□□□□ -1.18
PNKP-217ENST00000625216 TRBV7-6A0A0J9YX20 115 aa7.68□□□□□ -1.18
PNKP-217ENST00000625216 ATXN8Q156A1 80 aa7.68□□□□□ -1.18
PNKP-217ENST00000625216 B5MCH6 92 aa7.67□□□□□ -1.18
PNKP-217ENST00000625216 H3BMG7 143 aa7.67□□□□□ -1.18
PNKP-217ENST00000625216 LINC00575Q6W349 94 aa7.67□□□□□ -1.18
PNKP-217ENST00000625216 GTF2H5Q6ZYL4 71 aa7.67□□□□□ -1.18
PNKP-217ENST00000625216 ETDCA0A1B0GVM5 59 aa7.66□□□□□ -1.18
PNKP-217ENST00000625216 H0Y9J4 135 aa7.65□□□□□ -1.18
PNKP-217ENST00000625216 TRACP01848 142 aa7.65□□□□□ -1.18
PNKP-217ENST00000625216 UBE2V1Q13404 147 aa7.65□□□□□ -1.18
PNKP-217ENST00000625216 Q6ZRX8 168 aa7.65□□□□□ -1.18
PNKP-217ENST00000625216 MTURNQ8N3F0 131 aa7.65□□□□□ -1.18
PNKP-217ENST00000625216 PRLHP81277 87 aa7.64□□□□□ -1.19
PNKP-217ENST00000625216 FAM19A1Q7Z5A9 133 aa7.64□□□□□ -1.19
PNKP-217ENST00000625216 Q9BRP9 147 aa7.64□□□□□ -1.19
PNKP-217ENST00000625216 PRO0461Q9UI25 63 aa7.64□□□□□ -1.19
PNKP-217ENST00000625216 A0A1B0GX51 115 aa7.63□□□□□ -1.19
PNKP-217ENST00000625216 hADV29S1A0JD25 119 aa7.62□□□□□ -1.19
PNKP-217ENST00000625216 C9JAW5 83 aa7.62□□□□□ -1.19
PNKP-217ENST00000625216 BCE1O60756 84 aa7.62□□□□□ -1.19
PNKP-217ENST00000625216 SMCPP49901 116 aaPredicted RBP7.61□□□□□ -1.19
PNKP-217ENST00000625216 KRTAP13-1Q8IUC0 172 aa7.61□□□□□ -1.19
PNKP-217ENST00000625216 SMCR5Q8TEV8 140 aa7.61□□□□□ -1.19
PNKP-217ENST00000625216 LRP2P98164 4655 aa7.6□□□□□ -1.19
PNKP-217ENST00000625216 ZNF861PO60384 105 aa7.6□□□□□ -1.19
PNKP-217ENST00000625216 ERC2-IT1O76042 136 aa7.6□□□□□ -1.19
PNKP-217ENST00000625216 SLC25A20O43772 301 aa7.59□□□□□ -1.19
PNKP-217ENST00000625216 DNAL4O96015 105 aa7.59□□□□□ -1.19
PNKP-217ENST00000625216 Q6ZQY7 126 aa7.59□□□□□ -1.19
PNKP-217ENST00000625216 DHRS4-AS1Q9P1J3 65 aa7.59□□□□□ -1.19
PNKP-217ENST00000625216 UBE2AP49459 152 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms