RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 LTBP2Q14767 1821 aa7.97□□□□□ -1.13
SLC6A6-210ENST00000622186 CASC10Q5T4H9 136 aa7.97□□□□□ -1.13
SLC6A6-210ENST00000622186 LRRK2Q5S007 2527 aa7.97□□□□□ -1.13
SLC6A6-210ENST00000622186 A0A0G2JQZ4 141 aa7.96□□□□□ -1.13
SLC6A6-210ENST00000622186 A0A1W2PNN7 141 aa7.96□□□□□ -1.13
SLC6A6-210ENST00000622186 LINC00310P59036 64 aa7.96□□□□□ -1.14
SLC6A6-210ENST00000622186 KCNQ1DNQ9H478 68 aa7.96□□□□□ -1.14
SLC6A6-210ENST00000622186 RPS28P62857 69 aaKnown RBP7.95□□□□□ -1.14
SLC6A6-210ENST00000622186 FN1P02751 2386 aaKnown RBP7.95□□□□□ -1.14
SLC6A6-210ENST00000622186 NCOR2Q9Y618 2525 aa7.95□□□□□ -1.14
SLC6A6-210ENST00000622186 ERC2-IT1O76042 136 aa7.94□□□□□ -1.14
SLC6A6-210ENST00000622186 TNP2Q05952 138 aa7.93□□□□□ -1.14
SLC6A6-210ENST00000622186 SPRR4Q96PI1 79 aa7.91□□□□□ -1.14
SLC6A6-210ENST00000622186 LINC00612Q8N6U2 182 aa7.9□□□□□ -1.14
SLC6A6-210ENST00000622186 C19orf73Q9NVV2 129 aa7.9□□□□□ -1.14
SLC6A6-210ENST00000622186 DNAH12Q6ZR08 3092 aa7.9□□□□□ -1.14
SLC6A6-210ENST00000622186 CD164Q04900 197 aa7.89□□□□□ -1.15
SLC6A6-210ENST00000622186 EML5Q05BV3 1969 aa7.89□□□□□ -1.15
SLC6A6-210ENST00000622186 TLN1Q9Y490 2541 aaKnown RBP7.89□□□□□ -1.15
SLC6A6-210ENST00000622186 Q1T7F1 81 aa7.88□□□□□ -1.15
SLC6A6-210ENST00000622186 CSAG1Q6PB30 78 aa7.88□□□□□ -1.15
SLC6A6-210ENST00000622186 KTN1-AS1Q86SY8 53 aa7.87□□□□□ -1.15
SLC6A6-210ENST00000622186 S4R3F8 94 aa7.86□□□□□ -1.15
SLC6A6-210ENST00000622186 LINC01546A6NGU7 62 aa7.85□□□□□ -1.15
SLC6A6-210ENST00000622186 SEC61BP60468 96 aaKnown RBP7.84□□□□□ -1.15
SLC6A6-210ENST00000622186 ZFYVE26Q68DK2 2539 aa7.84□□□□□ -1.15
SLC6A6-210ENST00000622186 IGF2RP11717 2491 aa7.84□□□□□ -1.16
SLC6A6-210ENST00000622186 Q8N377 158 aa7.83□□□□□ -1.16
SLC6A6-210ENST00000622186 WIPF1O43516 503 aa7.83□□□□□ -1.16
SLC6A6-210ENST00000622186 H1FX-AS1Q4G0G2 97 aa7.82□□□□□ -1.16
SLC6A6-210ENST00000622186 C10orf142B7Z368 130 aa7.82□□□□□ -1.16
SLC6A6-210ENST00000622186 R4GN34 69 aa7.8□□□□□ -1.16
SLC6A6-210ENST00000622186 CPAMD8Q8IZJ3 1885 aa7.8□□□□□ -1.16
SLC6A6-210ENST00000622186 PIEZO1Q92508 2521 aa7.79□□□□□ -1.16
SLC6A6-210ENST00000622186 A0A1B0GU33 70 aa7.79□□□□□ -1.16
SLC6A6-210ENST00000622186 SMCPP49901 116 aaPredicted RBP7.79□□□□□ -1.16
SLC6A6-210ENST00000622186 BRCA2P51587 3418 aa7.79□□□□□ -1.16
SLC6A6-210ENST00000622186 ZNF462Q96JM2 2506 aa7.79□□□□□ -1.16
SLC6A6-210ENST00000622186 LCA10Q71F78 164 aa7.78□□□□□ -1.16
SLC6A6-210ENST00000622186 MUC22E2RYF6 1773 aaPredicted RBP7.78□□□□□ -1.16
SLC6A6-210ENST00000622186 KRTAP10-3P60369 221 aa7.78□□□□□ -1.16
SLC6A6-210ENST00000622186 A0A0A0MQY5 61 aa7.77□□□□□ -1.17
SLC6A6-210ENST00000622186 TLN2Q9Y4G6 2542 aa7.77□□□□□ -1.17
SLC6A6-210ENST00000622186 ABCA12Q86UK0 2595 aa7.77□□□□□ -1.17
SLC6A6-210ENST00000622186 CNBPP62633 177 aaKnown RBP7.77□□□□□ -1.17
SLC6A6-210ENST00000622186 PRR34Q9NV39 138 aa7.77□□□□□ -1.17
SLC6A6-210ENST00000622186 PTPRBP23467 1997 aa7.75□□□□□ -1.17
SLC6A6-210ENST00000622186 PIEZO2Q9H5I5 2752 aa7.74□□□□□ -1.17
SLC6A6-210ENST00000622186 BPTFQ12830 3046 aa7.74□□□□□ -1.17
SLC6A6-210ENST00000622186 COL27A1Q8IZC6 1860 aaPredicted RBP7.73□□□□□ -1.17
SLC6A6-210ENST00000622186 SPINK7P58062 85 aa7.68□□□□□ -1.18
SLC6A6-210ENST00000622186 ACANP16112 2415 aa7.67□□□□□ -1.18
SLC6A6-210ENST00000622186 DMAC1Q96GE9 116 aa7.67□□□□□ -1.18
SLC6A6-210ENST00000622186 CEP350Q5VT06 3117 aa7.67□□□□□ -1.18
SLC6A6-210ENST00000622186 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.67□□□□□ -1.18
SLC6A6-210ENST00000622186 ZCCHC13Q8WW36 166 aaKnown RBP7.66□□□□□ -1.18
SLC6A6-210ENST00000622186 COL4A2P08572 1712 aa7.65□□□□□ -1.18
SLC6A6-210ENST00000622186 PRO0461Q9UI25 63 aa7.65□□□□□ -1.18
SLC6A6-210ENST00000622186 H7BZZ5 65 aa7.64□□□□□ -1.19
SLC6A6-210ENST00000622186 CHD8Q9HCK8 2581 aa7.64□□□□□ -1.19
SLC6A6-210ENST00000622186 SPANXA2-OT1Q8N9U9 137 aa7.64□□□□□ -1.19
SLC6A6-210ENST00000622186 A0A1W2PNM2 257 aa7.63□□□□□ -1.19
SLC6A6-210ENST00000622186 GIG44P09565 113 aaPredicted RBP7.63□□□□□ -1.19
SLC6A6-210ENST00000622186 M0QZ58 72 aa7.63□□□□□ -1.19
SLC6A6-210ENST00000622186 FAM229BQ4G0N7 80 aa7.63□□□□□ -1.19
SLC6A6-210ENST00000622186 OXTP01178 125 aa7.6□□□□□ -1.19
SLC6A6-210ENST00000622186 KLKP1Q107X0 134 aa7.6□□□□□ -1.19
SLC6A6-210ENST00000622186 LAMA3Q16787 3333 aa7.58□□□□□ -1.2
SLC6A6-210ENST00000622186 PCSK5Q92824 1860 aa7.58□□□□□ -1.2
SLC6A6-210ENST00000622186 USP9XQ93008 2570 aaPredicted RBP7.56□□□□□ -1.2
SLC6A6-210ENST00000622186 LCE6AA0A183 80 aa7.55□□□□□ -1.2
SLC6A6-210ENST00000622186 PKD1L2Q7Z442 2459 aa7.54□□□□□ -1.2
SLC6A6-210ENST00000622186 EIF4EBP3O60516 100 aaPredicted RBP7.52□□□□□ -1.21
SLC6A6-210ENST00000622186 C5orf42Q9H799 3197 aa7.51□□□□□ -1.21
SLC6A6-210ENST00000622186 PLAC8Q9NZF1 115 aa7.5□□□□□ -1.21
SLC6A6-210ENST00000622186 MKI67P46013 3256 aaKnown RBP7.49□□□□□ -1.21
SLC6A6-210ENST00000622186 Q8N9P0 234 aaPredicted RBP7.48□□□□□ -1.21
SLC6A6-210ENST00000622186 DNAH14Q0VDD8 3507 aa7.48□□□□□ -1.21
SLC6A6-210ENST00000622186 USP34Q70CQ2 3546 aa7.47□□□□□ -1.21
SLC6A6-210ENST00000622186 A0A096LNT2 108 aa7.47□□□□□ -1.21
SLC6A6-210ENST00000622186 ADM2Q7Z4H4 148 aa7.47□□□□□ -1.21
SLC6A6-210ENST00000622186 KLK9Q2XQG4 91 aa7.45□□□□□ -1.22
SLC6A6-210ENST00000622186 MTORP42345 2549 aa7.44□□□□□ -1.22
SLC6A6-210ENST00000622186 RPL37P61927 97 aaKnown RBP7.42□□□□□ -1.22
SLC6A6-210ENST00000622186 Q5W150 140 aa7.42□□□□□ -1.22
SLC6A6-210ENST00000622186 SETD2Q9BYW2 2564 aaPredicted RBP7.41□□□□□ -1.22
SLC6A6-210ENST00000622186 LAMA2P24043 3122 aaKnown RBP7.41□□□□□ -1.22
SLC6A6-210ENST00000622186 C20orf166-AS1Q96NR2 134 aa7.41□□□□□ -1.22
SLC6A6-210ENST00000622186 CDH23Q9H251 3354 aa7.4□□□□□ -1.22
SLC6A6-210ENST00000622186 ROMO1P60602 79 aa7.4□□□□□ -1.23
SLC6A6-210ENST00000622186 HTTP42858 3142 aa7.39□□□□□ -1.23
SLC6A6-210ENST00000622186 POLQO75417 2590 aa7.38□□□□□ -1.23
SLC6A6-210ENST00000622186 KRTAP1-3Q8IUG1 177 aa7.37□□□□□ -1.23
SLC6A6-210ENST00000622186 PRAC1Q96KF2 57 aa7.37□□□□□ -1.23
SLC6A6-210ENST00000622186 KRTAP10-1P60331 282 aa7.37□□□□□ -1.23
SLC6A6-210ENST00000622186 KRTAP1-1Q07627 177 aa7.37□□□□□ -1.23
SLC6A6-210ENST00000622186 FASNP49327 2511 aaKnown RBP7.37□□□□□ -1.23
SLC6A6-210ENST00000622186 FP248Q71RG6 208 aaPredicted RBP7.37□□□□□ -1.23
SLC6A6-210ENST00000622186 MMP24-AS1A0A0U1RRL7 71 aa7.36□□□□□ -1.23
SLC6A6-210ENST00000622186 Q75L30 129 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms