RNA–Protein interactions for RNA: ENST00000622082.4

NUCB2-220, Transcript of nucleobindin 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NUCB2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-220ENST00000622082 HEPN1Q6WQI6 88 aa-0.64□□□□□ -2.51
NUCB2-220ENST00000622082 HIGD1BQ9P298 99 aa-0.64□□□□□ -2.51
NUCB2-220ENST00000622082 WFDC13Q8IUB5 93 aa-0.65□□□□□ -2.51
NUCB2-220ENST00000622082 DNHD1Q96M86 4753 aa-0.66□□□□□ -2.51
NUCB2-220ENST00000622082 PKD1L3Q7Z443 1732 aa-0.66□□□□□ -2.51
NUCB2-220ENST00000622082 SPRR2FQ96RM1 72 aa-0.66□□□□□ -2.51
NUCB2-220ENST00000622082 FASNP49327 2511 aaKnown RBP-0.66□□□□□ -2.52
NUCB2-220ENST00000622082 DSPP15924 2871 aaKnown RBP-0.66□□□□□ -2.52
NUCB2-220ENST00000622082 H0YGG7 62 aa-0.67□□□□□ -2.52
NUCB2-220ENST00000622082 CICQ96RK0 1608 aaPredicted RBP-0.67□□□□□ -2.52
NUCB2-220ENST00000622082 NIPBLQ6KC79 2804 aaeCLIP-0.67□□□□□ -2.52
NUCB2-220ENST00000622082 PKD1P98161 4303 aa-0.67□□□□□ -2.52
NUCB2-220ENST00000622082 MT1AP04731 61 aa-0.68□□□□□ -2.52
NUCB2-220ENST00000622082 IGLC2P0DOY2 106 aa-0.68□□□□□ -2.52
NUCB2-220ENST00000622082 IGLC3P0DOY3 106 aa-0.68□□□□□ -2.52
NUCB2-220ENST00000622082 ABCA13Q86UQ4 5058 aa-0.68□□□□□ -2.52
NUCB2-220ENST00000622082 DNAH6Q9C0G6 4158 aa-0.68□□□□□ -2.52
NUCB2-220ENST00000622082 PKIAP61925 76 aa-0.69□□□□□ -2.52
NUCB2-220ENST00000622082 NMSQ5H8A3 153 aa-0.69□□□□□ -2.52
NUCB2-220ENST00000622082 TROQ12816 1431 aaPredicted RBP-0.69□□□□□ -2.52
NUCB2-220ENST00000622082 USP9XQ93008 2570 aaPredicted RBP-0.69□□□□□ -2.52
NUCB2-220ENST00000622082 ATP10BO94823 1461 aa-0.69□□□□□ -2.52
NUCB2-220ENST00000622082 DNAH3Q8TD57 4116 aa-0.69□□□□□ -2.52
NUCB2-220ENST00000622082 BCORQ6W2J9 1755 aa-0.69□□□□□ -2.52
NUCB2-220ENST00000622082 TNRC18O15417 2968 aaPredicted RBP-0.7□□□□□ -2.52
NUCB2-220ENST00000622082 SNHG12Q9BXW3 62 aa-0.7□□□□□ -2.52
NUCB2-220ENST00000622082 MUC17Q685J3 4493 aa-0.7□□□□□ -2.52
NUCB2-220ENST00000622082 MYO18BQ8IUG5 2567 aa-0.7□□□□□ -2.52
NUCB2-220ENST00000622082 PRRC2CQ9Y520 2896 aaKnown RBP-0.7□□□□□ -2.52
NUCB2-220ENST00000622082 COX6B2Q6YFQ2 88 aa-0.7□□□□□ -2.52
NUCB2-220ENST00000622082 MAGI2Q86UL8 1455 aa-0.71□□□□□ -2.52
NUCB2-220ENST00000622082 WDR87Q6ZQQ6 2873 aa-0.71□□□□□ -2.52
NUCB2-220ENST00000622082 PKHD1L1Q86WI1 4243 aa-0.71□□□□□ -2.52
NUCB2-220ENST00000622082 UBE2D4Q9Y2X8 147 aa-0.71□□□□□ -2.52
NUCB2-220ENST00000622082 AKAP13Q12802 2813 aa-0.72□□□□□ -2.52
NUCB2-220ENST00000622082 GYPAP02724 150 aa-0.72□□□□□ -2.53
NUCB2-220ENST00000622082 COX7BP24311 80 aa-0.72□□□□□ -2.53
NUCB2-220ENST00000622082 QSER1Q2KHR3 1735 aa-0.73□□□□□ -2.53
NUCB2-220ENST00000622082 PREX1Q8TCU6 1659 aa-0.73□□□□□ -2.53
NUCB2-220ENST00000622082 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.73□□□□□ -2.53
NUCB2-220ENST00000622082 DNAH2Q9P225 4427 aa-0.73□□□□□ -2.53
NUCB2-220ENST00000622082 RGPD2P0DJD1 1756 aa-0.73□□□□□ -2.53
NUCB2-220ENST00000622082 PLECQ15149 4684 aaKnown RBP-0.73□□□□□ -2.53
NUCB2-220ENST00000622082 COL12A1Q99715 3063 aa-0.73□□□□□ -2.53
NUCB2-220ENST00000622082 CELSR3Q9NYQ7 3312 aa-0.74□□□□□ -2.53
NUCB2-220ENST00000622082 NBASA2RRP1 2371 aa-0.74□□□□□ -2.53
NUCB2-220ENST00000622082 LYSTQ99698 3801 aa-0.74□□□□□ -2.53
NUCB2-220ENST00000622082 RGPD8O14715 1765 aaPredicted RBP-0.74□□□□□ -2.53
NUCB2-220ENST00000622082 RGPD5Q99666 1765 aa-0.74□□□□□ -2.53
NUCB2-220ENST00000622082 TACC2O95359 2948 aa-0.74□□□□□ -2.53
NUCB2-220ENST00000622082 H3BNG1 76 aa-0.74□□□□□ -2.53
NUCB2-220ENST00000622082 NDUFA3O95167 84 aa-0.74□□□□□ -2.53
NUCB2-220ENST00000622082 SMIM11AP58511 58 aa-0.74□□□□□ -2.53
NUCB2-220ENST00000622082 KNL1Q8NG31 2342 aa-0.74□□□□□ -2.53
NUCB2-220ENST00000622082 LRRC9Q6ZRR7 1453 aa-0.75□□□□□ -2.53
NUCB2-220ENST00000622082 FAT3Q8TDW7 4589 aa-0.75□□□□□ -2.53
NUCB2-220ENST00000622082 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.75□□□□□ -2.53
NUCB2-220ENST00000622082 ALKQ9UM73 1620 aa-0.75□□□□□ -2.53
NUCB2-220ENST00000622082 C9orf92A6NGG3 77 aa-0.75□□□□□ -2.53
NUCB2-220ENST00000622082 RPL38P63173 70 aaKnown RBP-0.75□□□□□ -2.53
NUCB2-220ENST00000622082 VPS13DQ5THJ4 4388 aa-0.76□□□□□ -2.53
NUCB2-220ENST00000622082 UBR3Q6ZT12 1888 aa-0.76□□□□□ -2.53
NUCB2-220ENST00000622082 MYO3AQ8NEV4 1616 aa-0.76□□□□□ -2.53
NUCB2-220ENST00000622082 LAMA3Q16787 3333 aa-0.76□□□□□ -2.53
NUCB2-220ENST00000622082 SPG11Q96JI7 2443 aa-0.76□□□□□ -2.53
NUCB2-220ENST00000622082 LRRC7Q96NW7 1537 aa-0.77□□□□□ -2.53
NUCB2-220ENST00000622082 A0A1B0GUT8 65 aa-0.77□□□□□ -2.53
NUCB2-220ENST00000622082 TRANK1O15050 2925 aa-0.77□□□□□ -2.53
NUCB2-220ENST00000622082 TEX15Q9BXT5 2789 aa-0.78□□□□□ -2.53
NUCB2-220ENST00000622082 CUBNO60494 3623 aa-0.78□□□□□ -2.53
NUCB2-220ENST00000622082 ATP7BP35670 1465 aa-0.78□□□□□ -2.53
NUCB2-220ENST00000622082 HMGN2P05204 90 aaKnown RBP-0.78□□□□□ -2.53
NUCB2-220ENST00000622082 PLGLAQ15195 96 aa-0.78□□□□□ -2.53
NUCB2-220ENST00000622082 GAFA1Q96PS6 74 aa-0.78□□□□□ -2.53
NUCB2-220ENST00000622082 C4AP0C0L4 1744 aa-0.78□□□□□ -2.53
NUCB2-220ENST00000622082 C4BP0C0L5 1744 aa-0.78□□□□□ -2.53
NUCB2-220ENST00000622082 ANKRD11Q6UB99 2663 aaPredicted RBP-0.78□□□□□ -2.53
NUCB2-220ENST00000622082 REV3LO60673 3130 aa-0.78□□□□□ -2.53
NUCB2-220ENST00000622082 HTTP42858 3142 aa-0.78□□□□□ -2.53
NUCB2-220ENST00000622082 ANK3Q12955 4377 aaKnown RBP-0.78□□□□□ -2.53
NUCB2-220ENST00000622082 IQCF6A8MYZ5 107 aa-0.79□□□□□ -2.54
NUCB2-220ENST00000622082 PEA15Q15121 130 aa-0.79□□□□□ -2.54
NUCB2-220ENST00000622082 AKAP9Q99996 3911 aa-0.79□□□□□ -2.54
NUCB2-220ENST00000622082 RGPD1P0DJD0 1748 aa-0.8□□□□□ -2.54
NUCB2-220ENST00000622082 C3orf79P0CE67 100 aa-0.8□□□□□ -2.54
NUCB2-220ENST00000622082 C20orf78Q9BR46 151 aa-0.8□□□□□ -2.54
NUCB2-220ENST00000622082 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.8□□□□□ -2.54
NUCB2-220ENST00000622082 DNAH9Q9NYC9 4486 aa-0.8□□□□□ -2.54
NUCB2-220ENST00000622082 PDE4DIPQ5VU43 2346 aa-0.8□□□□□ -2.54
NUCB2-220ENST00000622082 RGPD4Q7Z3J3 1758 aa-0.8□□□□□ -2.54
NUCB2-220ENST00000622082 LAMA1P25391 3075 aa-0.8□□□□□ -2.54
NUCB2-220ENST00000622082 COL6A5A8TX70 2615 aa-0.8□□□□□ -2.54
NUCB2-220ENST00000622082 ANKRD50Q9ULJ7 1429 aa-0.8□□□□□ -2.54
NUCB2-220ENST00000622082 CYB5AP00167 134 aa-0.81□□□□□ -2.54
NUCB2-220ENST00000622082 VPS13BQ7Z7G8 4022 aa-0.81□□□□□ -2.54
NUCB2-220ENST00000622082 TIAM2Q8IVF5 1701 aa-0.82□□□□□ -2.54
NUCB2-220ENST00000622082 UBR1Q8IWV7 1749 aa-0.82□□□□□ -2.54
NUCB2-220ENST00000622082 KRTAP20-1Q3LI63 56 aa-0.82□□□□□ -2.54
NUCB2-220ENST00000622082 PRO3102Q9H379 93 aa-0.82□□□□□ -2.54
NUCB2-220ENST00000622082 PLXNC1O60486 1568 aa-0.82□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms