RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 COL6A5A8TX70 2615 aa6.17□□□□□ -1.42
RBFOX1-223ENST00000620507 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.16□□□□□ -1.42
RBFOX1-223ENST00000620507 C3orf84H3BNL1 204 aa6.16□□□□□ -1.42
RBFOX1-223ENST00000620507 BPY2O14599 106 aa6.16□□□□□ -1.42
RBFOX1-223ENST00000620507 H3BS24 57 aa6.15□□□□□ -1.42
RBFOX1-223ENST00000620507 FAM19A1Q7Z5A9 133 aa6.15□□□□□ -1.42
RBFOX1-223ENST00000620507 CD164Q04900 197 aa6.15□□□□□ -1.42
RBFOX1-223ENST00000620507 HIGD2AQ9BW72 106 aa6.15□□□□□ -1.42
RBFOX1-223ENST00000620507 TENM4Q6N022 2769 aa6.15□□□□□ -1.43
RBFOX1-223ENST00000620507 ELOF1P60002 83 aaKnown RBP6.15□□□□□ -1.43
RBFOX1-223ENST00000620507 C14orf177Q52M58 125 aa6.14□□□□□ -1.43
RBFOX1-223ENST00000620507 Q6ZRP5 223 aa6.14□□□□□ -1.43
RBFOX1-223ENST00000620507 Q6ZVQ6 151 aa6.14□□□□□ -1.43
RBFOX1-223ENST00000620507 NIPBLQ6KC79 2804 aaeCLIP6.14□□□□□ -1.43
RBFOX1-223ENST00000620507 Q6ZQT0 140 aa6.13□□□□□ -1.43
RBFOX1-223ENST00000620507 C7orf33Q8WU49 177 aa6.13□□□□□ -1.43
RBFOX1-223ENST00000620507 TRBV7-6A0A0J9YX20 115 aa6.13□□□□□ -1.43
RBFOX1-223ENST00000620507 LRCOL1A6NCL2 159 aa6.13□□□□□ -1.43
RBFOX1-223ENST00000620507 DNAH10OSP0CZ25 163 aa6.13□□□□□ -1.43
RBFOX1-223ENST00000620507 C15orf56Q8N910 161 aa6.13□□□□□ -1.43
RBFOX1-223ENST00000620507 LINC00588Q9Y4M8 146 aa6.13□□□□□ -1.43
RBFOX1-223ENST00000620507 LINC01547P58512 204 aaPredicted RBP6.12□□□□□ -1.43
RBFOX1-223ENST00000620507 CUBNO60494 3623 aa6.12□□□□□ -1.43
RBFOX1-223ENST00000620507 UBE2AP49459 152 aa6.11□□□□□ -1.43
RBFOX1-223ENST00000620507 LOC110117498A0A087WWA1 95 aa6.11□□□□□ -1.43
RBFOX1-223ENST00000620507 LINC00167Q96N53 147 aa6.11□□□□□ -1.43
RBFOX1-223ENST00000620507 SERTAD4-AS1Q5TG53 156 aa6.1□□□□□ -1.43
RBFOX1-223ENST00000620507 VPS13CQ709C8 3753 aa6.1□□□□□ -1.43
RBFOX1-223ENST00000620507 OBSCN-AS1Q96MR7 158 aa6.1□□□□□ -1.43
RBFOX1-223ENST00000620507 C22orf24Q9Y442 160 aa6.1□□□□□ -1.43
RBFOX1-223ENST00000620507 PDZD2O15018 2839 aa6.1□□□□□ -1.43
RBFOX1-223ENST00000620507 PRYO14603 147 aa6.09□□□□□ -1.43
RBFOX1-223ENST00000620507 Q8NDZ9 215 aa6.09□□□□□ -1.43
RBFOX1-223ENST00000620507 C1orf137Q5JT78 98 aa6.09□□□□□ -1.44
RBFOX1-223ENST00000620507 REG3GQ6UW15 175 aa6.08□□□□□ -1.44
RBFOX1-223ENST00000620507 LINC00474Q9P2X8 69 aa6.08□□□□□ -1.44
RBFOX1-223ENST00000620507 LINC00528Q8N1L1 170 aa6.07□□□□□ -1.44
RBFOX1-223ENST00000620507 PSPHP1O15172 72 aa6.07□□□□□ -1.44
RBFOX1-223ENST00000620507 CXCL6P80162 114 aa6.07□□□□□ -1.44
RBFOX1-223ENST00000620507 Q5XG85 94 aa6.07□□□□□ -1.44
RBFOX1-223ENST00000620507 TRAV7A0A075B6U4 112 aa6.07□□□□□ -1.44
RBFOX1-223ENST00000620507 K7EIL1 84 aa6.06□□□□□ -1.44
RBFOX1-223ENST00000620507 A0A096LNI7 61 aa6.05□□□□□ -1.44
RBFOX1-223ENST00000620507 Q6ZRX8 168 aa6.05□□□□□ -1.44
RBFOX1-223ENST00000620507 B9D2Q9BPU9 175 aa6.05□□□□□ -1.44
RBFOX1-223ENST00000620507 KCNQ1DNQ9H478 68 aa6.05□□□□□ -1.44
RBFOX1-223ENST00000620507 FAM168BA1KXE4 195 aa6.05□□□□□ -1.44
RBFOX1-223ENST00000620507 M0R2N4 97 aa6.04□□□□□ -1.44
RBFOX1-223ENST00000620507 NBEAL1Q6ZS30 2694 aa6.04□□□□□ -1.44
RBFOX1-223ENST00000620507 Q8N9L7 120 aa6.03□□□□□ -1.44
RBFOX1-223ENST00000620507 TM2D3Q9BRN9 247 aa6.03□□□□□ -1.44
RBFOX1-223ENST00000620507 ZFHX3Q15911 3703 aa6.03□□□□□ -1.44
RBFOX1-223ENST00000620507 PRLHP81277 87 aa6.03□□□□□ -1.44
RBFOX1-223ENST00000620507 VWFP04275 2813 aa6.02□□□□□ -1.44
RBFOX1-223ENST00000620507 CDK2AP2O75956 126 aa6.02□□□□□ -1.45
RBFOX1-223ENST00000620507 CASC10Q5T4H9 136 aa6.02□□□□□ -1.45
RBFOX1-223ENST00000620507 TENM1Q9UKZ4 2725 aa6.02□□□□□ -1.45
RBFOX1-223ENST00000620507 TRBV7-4A0A0J9YYF1 115 aa6.02□□□□□ -1.45
RBFOX1-223ENST00000620507 NUPR2A6NF83 97 aa6.01□□□□□ -1.45
RBFOX1-223ENST00000620507 NDUFC1O43677 76 aa6.01□□□□□ -1.45
RBFOX1-223ENST00000620507 ST20-AS1Q8NBB2 130 aa6.01□□□□□ -1.45
RBFOX1-223ENST00000620507 MDFIQ99750 246 aa6.01□□□□□ -1.45
RBFOX1-223ENST00000620507 IGLV1-50A0A075B6I6 118 aa6.01□□□□□ -1.45
RBFOX1-223ENST00000620507 ATP5EP56381 51 aaPredicted RBP6.01□□□□□ -1.45
RBFOX1-223ENST00000620507 CHKB-CPT1BH3BT56 60 aa6.01□□□□□ -1.45
RBFOX1-223ENST00000620507 TLX1NBP0CAT3 122 aa6.01□□□□□ -1.45
RBFOX1-223ENST00000620507 NBPF19A0A087WUL8 3843 aa6□□□□□ -1.45
RBFOX1-223ENST00000620507 OXTP01178 125 aa6□□□□□ -1.45
RBFOX1-223ENST00000620507 PRR4Q16378 134 aa6□□□□□ -1.45
RBFOX1-223ENST00000620507 KMT2BQ9UMN6 2715 aaPredicted RBP5.99□□□□□ -1.45
RBFOX1-223ENST00000620507 KRTAP26-1Q6PEX3 210 aa5.99□□□□□ -1.45
RBFOX1-223ENST00000620507 CYSTM1Q9H1C7 97 aa5.99□□□□□ -1.45
RBFOX1-223ENST00000620507 OTOGQ6ZRI0 2925 aa5.99□□□□□ -1.45
RBFOX1-223ENST00000620507 NDUFB1O75438 58 aa5.99□□□□□ -1.45
RBFOX1-223ENST00000620507 Q8N377 158 aa5.99□□□□□ -1.45
RBFOX1-223ENST00000620507 C16orf90A8MZG2 172 aa5.98□□□□□ -1.45
RBFOX1-223ENST00000620507 BCE1O60756 84 aa5.98□□□□□ -1.45
RBFOX1-223ENST00000620507 MP68P56378 58 aa5.98□□□□□ -1.45
RBFOX1-223ENST00000620507 H0Y9J4 135 aa5.98□□□□□ -1.45
RBFOX1-223ENST00000620507 Q9BRP9 147 aa5.98□□□□□ -1.45
RBFOX1-223ENST00000620507 PLA2G2DQ9UNK4 145 aa5.98□□□□□ -1.45
RBFOX1-223ENST00000620507 A0A087WSZ3 146 aa5.97□□□□□ -1.45
RBFOX1-223ENST00000620507 Q8NBF4 154 aa5.97□□□□□ -1.45
RBFOX1-223ENST00000620507 A6NED7 52 aa5.97□□□□□ -1.45
RBFOX1-223ENST00000620507 FAM30AQ9NZY2 134 aa5.97□□□□□ -1.45
RBFOX1-223ENST00000620507 WFDC13Q8IUB5 93 aa5.96□□□□□ -1.45
RBFOX1-223ENST00000620507 A0A1B0GW54 56 aa5.96□□□□□ -1.46
RBFOX1-223ENST00000620507 CHTF8P0CG12 524 aa5.96□□□□□ -1.46
RBFOX1-223ENST00000620507 DEFB116Q30KQ4 102 aa5.95□□□□□ -1.46
RBFOX1-223ENST00000620507 TMEM254Q8TBM7 123 aa5.95□□□□□ -1.46
RBFOX1-223ENST00000620507 BAHCC1Q9P281 2608 aa5.95□□□□□ -1.46
RBFOX1-223ENST00000620507 NDUFS5O43920 106 aa5.95□□□□□ -1.46
RBFOX1-223ENST00000620507 PHF5AQ7RTV0 110 aaKnown RBP5.95□□□□□ -1.46
RBFOX1-223ENST00000620507 LINC00476Q8WZB0 136 aa5.95□□□□□ -1.46
RBFOX1-223ENST00000620507 NBDYA0A0U1RRE5 68 aa5.94□□□□□ -1.46
RBFOX1-223ENST00000620507 IGLV9-49A0A0B4J1Y8 123 aa5.93□□□□□ -1.46
RBFOX1-223ENST00000620507 ERC2-IT1O76042 136 aa5.92□□□□□ -1.46
RBFOX1-223ENST00000620507 IGLV5-37A0A075B6J1 123 aa5.92□□□□□ -1.46
RBFOX1-223ENST00000620507 EPM2AB3EWF7 344 aa5.91□□□□□ -1.46
RBFOX1-223ENST00000620507 SMIM29Q86T20 159 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms