RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 LINC00643Q86TS7 51 aa7.1□□□□□ -1.27
POLR2A-209ENST00000617998 NBEAL1Q6ZS30 2694 aa7.1□□□□□ -1.27
POLR2A-209ENST00000617998 C8orf87E5RJ46 101 aa7.1□□□□□ -1.27
POLR2A-209ENST00000617998 SNURFQ9Y675 71 aa7.09□□□□□ -1.27
POLR2A-209ENST00000617998 ADAMTSL4-AS1Q5T5F5 129 aa7.09□□□□□ -1.27
POLR2A-209ENST00000617998 V9GYY9 64 aa7.09□□□□□ -1.27
POLR2A-209ENST00000617998 A0A1W2PNN7 141 aa7.09□□□□□ -1.28
POLR2A-209ENST00000617998 IGLV5-39A0A0G2JS06 123 aa7.08□□□□□ -1.28
POLR2A-209ENST00000617998 ELOF1P60002 83 aaKnown RBP7.07□□□□□ -1.28
POLR2A-209ENST00000617998 TSPEAR-AS2P59090 65 aa7.06□□□□□ -1.28
POLR2A-209ENST00000617998 FAM240AA0A1B0GVK7 77 aa7.05□□□□□ -1.28
POLR2A-209ENST00000617998 H0Y9P7 68 aa7.05□□□□□ -1.28
POLR2A-209ENST00000617998 VPREB1P12018 145 aa7.04□□□□□ -1.28
POLR2A-209ENST00000617998 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.04□□□□□ -1.28
POLR2A-209ENST00000617998 DSCR10P59022 87 aa7.03□□□□□ -1.28
POLR2A-209ENST00000617998 A6NED7 52 aa7.03□□□□□ -1.28
POLR2A-209ENST00000617998 TLX1NBP0CAT3 122 aa7.03□□□□□ -1.28
POLR2A-209ENST00000617998 KRTAP10-1P60331 282 aa7.03□□□□□ -1.28
POLR2A-209ENST00000617998 TP53AIP1Q9HCN2 124 aa7.01□□□□□ -1.29
POLR2A-209ENST00000617998 CCDC179H3BU77 68 aa7.01□□□□□ -1.29
POLR2A-209ENST00000617998 KRTAP10-2P60368 255 aa7.01□□□□□ -1.29
POLR2A-209ENST00000617998 SPRR4Q96PI1 79 aa7□□□□□ -1.29
POLR2A-209ENST00000617998 DNAH12Q6ZR08 3092 aa7□□□□□ -1.29
POLR2A-209ENST00000617998 UQCRQO14949 82 aa7□□□□□ -1.29
POLR2A-209ENST00000617998 C9orf129Q5T035 196 aaKnown RBP6.99□□□□□ -1.29
POLR2A-209ENST00000617998 TRANK1O15050 2925 aa6.98□□□□□ -1.29
POLR2A-209ENST00000617998 C1orf195Q5TG92 126 aa6.98□□□□□ -1.29
POLR2A-209ENST00000617998 IGLV5-45A0A087WSX0 123 aa6.98□□□□□ -1.29
POLR2A-209ENST00000617998 KCNQ1DNQ9H478 68 aa6.98□□□□□ -1.29
POLR2A-209ENST00000617998 SOSTDC1Q6X4U4 206 aa6.97□□□□□ -1.29
POLR2A-209ENST00000617998 PLAC8Q9NZF1 115 aa6.97□□□□□ -1.29
POLR2A-209ENST00000617998 RANBP2P49792 3224 aaKnown RBP6.96□□□□□ -1.3
POLR2A-209ENST00000617998 CHD7Q9P2D1 2997 aa6.96□□□□□ -1.3
POLR2A-209ENST00000617998 NDUFC1O43677 76 aa6.95□□□□□ -1.3
POLR2A-209ENST00000617998 IGLV8-61A0A075B6I0 122 aa6.95□□□□□ -1.3
POLR2A-209ENST00000617998 FAM229BQ4G0N7 80 aa6.95□□□□□ -1.3
POLR2A-209ENST00000617998 CXCL6P80162 114 aa6.94□□□□□ -1.3
POLR2A-209ENST00000617998 C1orf64Q8NEQ6 169 aa6.94□□□□□ -1.3
POLR2A-209ENST00000617998 DSPP15924 2871 aaKnown RBP6.94□□□□□ -1.3
POLR2A-209ENST00000617998 PCNTO95613 3336 aa6.93□□□□□ -1.3
POLR2A-209ENST00000617998 C5orf42Q9H799 3197 aa6.93□□□□□ -1.3
POLR2A-209ENST00000617998 Q8N1X5 172 aa6.92□□□□□ -1.3
POLR2A-209ENST00000617998 TRBV7-7A0A0K0K1E9 115 aa6.92□□□□□ -1.3
POLR2A-209ENST00000617998 ACYP2P14621 99 aa6.92□□□□□ -1.3
POLR2A-209ENST00000617998 A0A0C4DFX4 3053 aa6.92□□□□□ -1.3
POLR2A-209ENST00000617998 DMBT1Q9UGM3 2413 aaPredicted RBP6.92□□□□□ -1.3
POLR2A-209ENST00000617998 PMAIP1Q13794 54 aa6.91□□□□□ -1.3
POLR2A-209ENST00000617998 C2orf91Q6ZV80 131 aa6.91□□□□□ -1.3
POLR2A-209ENST00000617998 A0A1B0GW54 56 aa6.91□□□□□ -1.3
POLR2A-209ENST00000617998 LINC01554Q52M75 96 aa6.91□□□□□ -1.3
POLR2A-209ENST00000617998 MRPL34Q9BQ48 92 aaKnown RBP6.9□□□□□ -1.3
POLR2A-209ENST00000617998 STAB2Q8WWQ8 2551 aa6.9□□□□□ -1.3
POLR2A-209ENST00000617998 PSPHP1O15172 72 aa6.89□□□□□ -1.31
POLR2A-209ENST00000617998 TRAV22A0A0B4J277 110 aa6.88□□□□□ -1.31
POLR2A-209ENST00000617998 TRBV7-4A0A0J9YYF1 115 aa6.88□□□□□ -1.31
POLR2A-209ENST00000617998 ITPR2Q14571 2701 aa6.87□□□□□ -1.31
POLR2A-209ENST00000617998 Q6ZR54 194 aa6.87□□□□□ -1.31
POLR2A-209ENST00000617998 CHD9Q3L8U1 2897 aa6.86□□□□□ -1.31
POLR2A-209ENST00000617998 AKAP13Q12802 2813 aa6.86□□□□□ -1.31
POLR2A-209ENST00000617998 MGAQ8IWI9 3026 aa6.86□□□□□ -1.31
POLR2A-209ENST00000617998 IGFL1Q6UW32 110 aa6.86□□□□□ -1.31
POLR2A-209ENST00000617998 A8MWP4 228 aa6.86□□□□□ -1.31
POLR2A-209ENST00000617998 URB1-AS1Q96HZ7 61 aa6.86□□□□□ -1.31
POLR2A-209ENST00000617998 A0A087WVE0 104 aa6.85□□□□□ -1.31
POLR2A-209ENST00000617998 COX7CP15954 63 aa6.84□□□□□ -1.31
POLR2A-209ENST00000617998 KRTAP1-5Q9BYS1 174 aa6.84□□□□□ -1.31
POLR2A-209ENST00000617998 A0A1B0GVX0 72 aa6.83□□□□□ -1.32
POLR2A-209ENST00000617998 A0A096LNJ9 63 aa6.83□□□□□ -1.32
POLR2A-209ENST00000617998 CD164Q04900 197 aa6.83□□□□□ -1.32
POLR2A-209ENST00000617998 LINC00846Q9NV44 126 aa6.82□□□□□ -1.32
POLR2A-209ENST00000617998 REV3LO60673 3130 aa6.82□□□□□ -1.32
POLR2A-209ENST00000617998 TENM4Q6N022 2769 aa6.82□□□□□ -1.32
POLR2A-209ENST00000617998 LOC101927531A0A1B0GV80 90 aa6.81□□□□□ -1.32
POLR2A-209ENST00000617998 SMIM29Q86T20 159 aa6.81□□□□□ -1.32
POLR2A-209ENST00000617998 C8orf17Q9NRJ1 99 aa6.81□□□□□ -1.32
POLR2A-209ENST00000617998 K7EQZ3 153 aa6.81□□□□□ -1.32
POLR2A-209ENST00000617998 FP248Q71RG6 208 aaPredicted RBP6.79□□□□□ -1.32
POLR2A-209ENST00000617998 FLNCQ14315 2725 aa6.79□□□□□ -1.32
POLR2A-209ENST00000617998 LAMA3Q16787 3333 aa6.79□□□□□ -1.32
POLR2A-209ENST00000617998 LINC01546A6NGU7 62 aa6.78□□□□□ -1.32
POLR2A-209ENST00000617998 ATP5EP56381 51 aaPredicted RBP6.78□□□□□ -1.32
POLR2A-209ENST00000617998 SMIM26A0A096LP01 95 aa6.77□□□□□ -1.32
POLR2A-209ENST00000617998 A0A0G2JQZ4 141 aa6.77□□□□□ -1.33
POLR2A-209ENST00000617998 TMEM254Q8TBM7 123 aa6.77□□□□□ -1.33
POLR2A-209ENST00000617998 A0A1B0GU69 56 aa6.76□□□□□ -1.33
POLR2A-209ENST00000617998 ERC2-IT1O76042 136 aa6.76□□□□□ -1.33
POLR2A-209ENST00000617998 TRAV7A0A075B6U4 112 aa6.76□□□□□ -1.33
POLR2A-209ENST00000617998 HTTP42858 3142 aa6.76□□□□□ -1.33
POLR2A-209ENST00000617998 PRUNE2Q8WUY3 3088 aa6.74□□□□□ -1.33
POLR2A-209ENST00000617998 HIVEP1P15822 2718 aa6.73□□□□□ -1.33
POLR2A-209ENST00000617998 UBR5O95071 2799 aaPredicted RBP6.73□□□□□ -1.33
POLR2A-209ENST00000617998 Q8N377 158 aa6.73□□□□□ -1.33
POLR2A-209ENST00000617998 MKI67P46013 3256 aaKnown RBP6.72□□□□□ -1.33
POLR2A-209ENST00000617998 Q6ZQT0 140 aa6.72□□□□□ -1.33
POLR2A-209ENST00000617998 CAMK2N1Q7Z7J9 78 aa6.71□□□□□ -1.33
POLR2A-209ENST00000617998 CSAG1Q6PB30 78 aa6.71□□□□□ -1.34
POLR2A-209ENST00000617998 IGLV5-48A0A075B6I7 105 aa6.7□□□□□ -1.34
POLR2A-209ENST00000617998 MAP1AP78559 2803 aaPredicted RBP6.7□□□□□ -1.34
POLR2A-209ENST00000617998 HRES1P13985 223 aa6.7□□□□□ -1.34
POLR2A-209ENST00000617998 YPEL4Q96NS1 127 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms