RNA–Protein interactions for RNA: ENST00000616383.1

MMP28-206, Transcript of matrix metallopeptidase 28, humanhuman

TSL 3

Gene MMP28, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-206ENST00000616383 A0A087WYN8 130 aa6.92□□□□□ -1.3
MMP28-206ENST00000616383 M0R378 163 aa6.92□□□□□ -1.3
MMP28-206ENST00000616383 RPL13AP40429 203 aaKnown RBP6.92□□□□□ -1.3
MMP28-206ENST00000616383 Q6ZSA8 131 aa6.92□□□□□ -1.3
MMP28-206ENST00000616383 C7orf33Q8WU49 177 aa6.92□□□□□ -1.3
MMP28-206ENST00000616383 FAM30AQ9NZY2 134 aa6.92□□□□□ -1.3
MMP28-206ENST00000616383 C22orf24Q9Y442 160 aa6.92□□□□□ -1.3
MMP28-206ENST00000616383 TRAV13-2A0A0B4J235 113 aa6.91□□□□□ -1.3
MMP28-206ENST00000616383 GAGE10A6NGK3 116 aa6.91□□□□□ -1.3
MMP28-206ENST00000616383 MRPL55Q7Z7F7 128 aaKnown RBP6.91□□□□□ -1.3
MMP28-206ENST00000616383 OR13C6PQ8NH95 151 aa6.91□□□□□ -1.3
MMP28-206ENST00000616383 PLAC8Q9NZF1 115 aa6.91□□□□□ -1.3
MMP28-206ENST00000616383 PRO1854Q9UHT4 67 aa6.91□□□□□ -1.3
MMP28-206ENST00000616383 TRBV10-3A0A0K0K1G6 114 aa6.9□□□□□ -1.3
MMP28-206ENST00000616383 H7C2G1 150 aa6.9□□□□□ -1.3
MMP28-206ENST00000616383 S100A7L2Q5SY68 101 aa6.9□□□□□ -1.3
MMP28-206ENST00000616383 RYR1P21817 5038 aa6.9□□□□□ -1.31
MMP28-206ENST00000616383 EPM2AB3EWF7 344 aa6.89□□□□□ -1.31
MMP28-206ENST00000616383 IGLV6-57P01721 117 aa6.89□□□□□ -1.31
MMP28-206ENST00000616383 PHF5AQ7RTV0 110 aaKnown RBP6.89□□□□□ -1.31
MMP28-206ENST00000616383 LINC00167Q96N53 147 aa6.89□□□□□ -1.31
MMP28-206ENST00000616383 LRP1BQ9NZR2 4599 aa6.88□□□□□ -1.31
MMP28-206ENST00000616383 RPL37AP8A6NKH3 93 aa6.88□□□□□ -1.31
MMP28-206ENST00000616383 HAMPP81172 84 aa6.88□□□□□ -1.31
MMP28-206ENST00000616383 Q1RN00 199 aa6.88□□□□□ -1.31
MMP28-206ENST00000616383 LBHQ53QV2 105 aaPredicted RBP6.88□□□□□ -1.31
MMP28-206ENST00000616383 SCXQ7RTU7 201 aa6.88□□□□□ -1.31
MMP28-206ENST00000616383 TMEM126AQ9H061 195 aa6.88□□□□□ -1.31
MMP28-206ENST00000616383 TSPAN13O95857 204 aa6.87□□□□□ -1.31
MMP28-206ENST00000616383 COL5A1-AS1Q5SY13 56 aa6.87□□□□□ -1.31
MMP28-206ENST00000616383 CIRBP-AS1Q8TBR5 109 aa6.87□□□□□ -1.31
MMP28-206ENST00000616383 IGLV1-50A0A075B6I6 118 aa6.86□□□□□ -1.31
MMP28-206ENST00000616383 UBE2BP63146 152 aa6.86□□□□□ -1.31
MMP28-206ENST00000616383 TRAV23DV6A0A075B6W5 121 aa6.85□□□□□ -1.31
MMP28-206ENST00000616383 PRYO14603 147 aa6.85□□□□□ -1.31
MMP28-206ENST00000616383 TAX1BP3O14907 124 aa6.85□□□□□ -1.31
MMP28-206ENST00000616383 SMIM11BQ8TCY0 68 aa6.85□□□□□ -1.31
MMP28-206ENST00000616383 NAA38Q9BRA0 125 aaKnown RBP6.85□□□□□ -1.31
MMP28-206ENST00000616383 KRTAP11-1Q8IUC1 163 aa6.84□□□□□ -1.31
MMP28-206ENST00000616383 APOBP04114 4563 aaKnown RBP6.83□□□□□ -1.32
MMP28-206ENST00000616383 RPL28P46779 137 aaKnown RBP6.83□□□□□ -1.32
MMP28-206ENST00000616383 KCNQ1DNQ9H478 68 aa6.83□□□□□ -1.32
MMP28-206ENST00000616383 CBY1Q9Y3M2 126 aa6.83□□□□□ -1.32
MMP28-206ENST00000616383 C9orf118A6NHY6 69 aa6.82□□□□□ -1.32
MMP28-206ENST00000616383 H3BUT2 72 aa6.82□□□□□ -1.32
MMP28-206ENST00000616383 TRIAP1O43715 76 aa6.82□□□□□ -1.32
MMP28-206ENST00000616383 ZNF73O43830 326 aaPredicted RBP6.82□□□□□ -1.32
MMP28-206ENST00000616383 PSMB2P49721 201 aa6.82□□□□□ -1.32
MMP28-206ENST00000616383 C6orf99Q4VX62 202 aa6.82□□□□□ -1.32
MMP28-206ENST00000616383 REG3GQ6UW15 175 aa6.82□□□□□ -1.32
MMP28-206ENST00000616383 XGP55808 180 aa6.81□□□□□ -1.32
MMP28-206ENST00000616383 DIRC1Q969H9 104 aa6.81□□□□□ -1.32
MMP28-206ENST00000616383 KRTAP9-8Q9BYQ0 159 aa6.81□□□□□ -1.32
MMP28-206ENST00000616383 SPRR1AP35321 89 aa6.79□□□□□ -1.32
MMP28-206ENST00000616383 PSORS1C2Q9UIG4 136 aa6.79□□□□□ -1.32
MMP28-206ENST00000616383 ETDCA0A1B0GVM5 59 aa6.78□□□□□ -1.32
MMP28-206ENST00000616383 A0A1W2PPM0 123 aa6.78□□□□□ -1.32
MMP28-206ENST00000616383 KRTAP4-16G5E9R7 235 aaPredicted RBP6.78□□□□□ -1.32
MMP28-206ENST00000616383 COX7BP24311 80 aa6.78□□□□□ -1.32
MMP28-206ENST00000616383 TRBV7-6A0A0J9YX20 115 aa6.77□□□□□ -1.33
MMP28-206ENST00000616383 COX6CP09669 75 aa6.77□□□□□ -1.33
MMP28-206ENST00000616383 SCGB1C2P0DMR2 95 aa6.77□□□□□ -1.33
MMP28-206ENST00000616383 ELOF1P60002 83 aaKnown RBP6.77□□□□□ -1.33
MMP28-206ENST00000616383 VAMP3Q15836 100 aa6.77□□□□□ -1.33
MMP28-206ENST00000616383 CLEC2BQ92478 149 aa6.77□□□□□ -1.33
MMP28-206ENST00000616383 B5MCH6 92 aa6.76□□□□□ -1.33
MMP28-206ENST00000616383 BCE1O60756 84 aa6.76□□□□□ -1.33
MMP28-206ENST00000616383 FABP2P12104 132 aa6.76□□□□□ -1.33
MMP28-206ENST00000616383 PRLHP81277 87 aa6.76□□□□□ -1.33
MMP28-206ENST00000616383 C1orf137Q5JT78 98 aa6.76□□□□□ -1.33
MMP28-206ENST00000616383 LYRM7Q5U5X0 104 aa6.76□□□□□ -1.33
MMP28-206ENST00000616383 Q6ZRX8 168 aa6.76□□□□□ -1.33
MMP28-206ENST00000616383 FAM19A1Q7Z5A9 133 aa6.76□□□□□ -1.33
MMP28-206ENST00000616383 KIAA1109Q2LD37 5005 aa6.75□□□□□ -1.33
MMP28-206ENST00000616383 H0YGX0 51 aa6.75□□□□□ -1.33
MMP28-206ENST00000616383 CDK2AP2O75956 126 aa6.75□□□□□ -1.33
MMP28-206ENST00000616383 SRRM2Q9UQ35 2752 aaKnown RBP6.74□□□□□ -1.33
MMP28-206ENST00000616383 SMR3BP02814 79 aaPredicted RBP6.74□□□□□ -1.33
MMP28-206ENST00000616383 UBE2AP49459 152 aa6.74□□□□□ -1.33
MMP28-206ENST00000616383 FAM218AQ96MZ4 157 aa6.74□□□□□ -1.33
MMP28-206ENST00000616383 TCL1BO95988 128 aa6.73□□□□□ -1.33
MMP28-206ENST00000616383 LINC00575Q6W349 94 aa6.73□□□□□ -1.33
MMP28-206ENST00000616383 Q9BRP9 147 aa6.73□□□□□ -1.33
MMP28-206ENST00000616383 KRTAP13-1Q8IUC0 172 aa6.72□□□□□ -1.33
MMP28-206ENST00000616383 SPCS1Q9Y6A9 102 aa6.72□□□□□ -1.33
MMP28-206ENST00000616383 A0A1B0GV90 55 aa6.71□□□□□ -1.34
MMP28-206ENST00000616383 H0Y9J4 135 aa6.71□□□□□ -1.34
MMP28-206ENST00000616383 LST1O00453 97 aa6.71□□□□□ -1.34
MMP28-206ENST00000616383 SLC25A20O43772 301 aa6.71□□□□□ -1.34
MMP28-206ENST00000616383 IGLV7-43P04211 117 aa6.71□□□□□ -1.34
MMP28-206ENST00000616383 RPL37AP61513 92 aaKnown RBP6.71□□□□□ -1.34
MMP28-206ENST00000616383 HIGD2AQ9BW72 106 aa6.71□□□□□ -1.34
MMP28-206ENST00000616383 DHRS4-AS1Q9P1J3 65 aa6.71□□□□□ -1.34
MMP28-206ENST00000616383 HSPG2P98160 4391 aa6.71□□□□□ -1.34
MMP28-206ENST00000616383 TRBV20-1A0A075B6N2 111 aa6.7□□□□□ -1.34
MMP28-206ENST00000616383 K7EP34 96 aa6.7□□□□□ -1.34
MMP28-206ENST00000616383 INAFM2P0DMQ5 153 aa6.7□□□□□ -1.34
MMP28-206ENST00000616383 ATXN8Q156A1 80 aa6.7□□□□□ -1.34
MMP28-206ENST00000616383 SMCR5Q8TEV8 140 aa6.7□□□□□ -1.34
MMP28-206ENST00000616383 A0A1B0GX51 115 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms