RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 IGF2RP11717 2491 aa9.21□□□□□ -0.94
CHD1-212ENST00000614616 CEP350Q5VT06 3117 aa9.21□□□□□ -0.94
CHD1-212ENST00000614616 Q8N377 158 aa9.21□□□□□ -0.94
CHD1-212ENST00000614616 IGFL1Q6UW32 110 aa9.2□□□□□ -0.94
CHD1-212ENST00000614616 KLK9Q2XQG4 91 aa9.18□□□□□ -0.94
CHD1-212ENST00000614616 NOTCH2Q04721 2471 aa9.18□□□□□ -0.94
CHD1-212ENST00000614616 PLA2G1BP04054 148 aaKnown RBP9.18□□□□□ -0.94
CHD1-212ENST00000614616 INAFM1C9JVW0 142 aa9.17□□□□□ -0.94
CHD1-212ENST00000614616 CYSTM1Q9H1C7 97 aa9.17□□□□□ -0.94
CHD1-212ENST00000614616 A0A1B0GVX0 72 aa9.16□□□□□ -0.94
CHD1-212ENST00000614616 C8orf17Q9NRJ1 99 aa9.16□□□□□ -0.94
CHD1-212ENST00000614616 SPACA4Q8TDM5 124 aa9.15□□□□□ -0.94
CHD1-212ENST00000614616 LUZP6Q538Z0 58 aa9.14□□□□□ -0.95
CHD1-212ENST00000614616 PRO3102Q9H379 93 aa9.14□□□□□ -0.95
CHD1-212ENST00000614616 MTORP42345 2549 aa9.14□□□□□ -0.95
CHD1-212ENST00000614616 IGLV1-50A0A075B6I6 118 aa9.12□□□□□ -0.95
CHD1-212ENST00000614616 PHF5AQ7RTV0 110 aaKnown RBP9.12□□□□□ -0.95
CHD1-212ENST00000614616 FAM168BA1KXE4 195 aa9.11□□□□□ -0.95
CHD1-212ENST00000614616 IGLV7-46A0A075B6I9 117 aa9.11□□□□□ -0.95
CHD1-212ENST00000614616 Q5VV11 94 aa9.1□□□□□ -0.95
CHD1-212ENST00000614616 APLNQ9ULZ1 77 aa9.1□□□□□ -0.95
CHD1-212ENST00000614616 LINC00588Q9Y4M8 146 aa9.1□□□□□ -0.95
CHD1-212ENST00000614616 Q96NJ1 140 aa9.09□□□□□ -0.95
CHD1-212ENST00000614616 Q8N9P0 234 aaPredicted RBP9.08□□□□□ -0.96
CHD1-212ENST00000614616 PLA2G2DQ9UNK4 145 aa9.08□□□□□ -0.96
CHD1-212ENST00000614616 OXTP01178 125 aa9.07□□□□□ -0.96
CHD1-212ENST00000614616 C1orf134Q5TEV5 83 aa9.07□□□□□ -0.96
CHD1-212ENST00000614616 FAM104AQ969W3 186 aa9.06□□□□□ -0.96
CHD1-212ENST00000614616 LY6G6CO95867 125 aa9.06□□□□□ -0.96
CHD1-212ENST00000614616 CHTF8P0CG12 524 aa9.05□□□□□ -0.96
CHD1-212ENST00000614616 IGLV5-48A0A075B6I7 105 aa9.04□□□□□ -0.96
CHD1-212ENST00000614616 REV3LO60673 3130 aa9.04□□□□□ -0.96
CHD1-212ENST00000614616 DNAH10OSP0CZ25 163 aa9.03□□□□□ -0.96
CHD1-212ENST00000614616 LINC01558Q9Y6Z2 57 aa9.03□□□□□ -0.96
CHD1-212ENST00000614616 AKAP13Q12802 2813 aa9.02□□□□□ -0.97
CHD1-212ENST00000614616 CSAG1Q6PB30 78 aa9.01□□□□□ -0.97
CHD1-212ENST00000614616 SPRR4Q96PI1 79 aa9□□□□□ -0.97
CHD1-212ENST00000614616 DMAC1Q96GE9 116 aa9□□□□□ -0.97
CHD1-212ENST00000614616 C15orf56Q8N910 161 aa8.99□□□□□ -0.97
CHD1-212ENST00000614616 ASB16-AS1Q495Z4 193 aa8.99□□□□□ -0.97
CHD1-212ENST00000614616 USP24Q9UPU5 2620 aa8.99□□□□□ -0.97
CHD1-212ENST00000614616 PRR34Q9NV39 138 aa8.99□□□□□ -0.97
CHD1-212ENST00000614616 DNAH14Q0VDD8 3507 aa8.98□□□□□ -0.97
CHD1-212ENST00000614616 TLX1NBP0CAT3 122 aa8.98□□□□□ -0.97
CHD1-212ENST00000614616 A0A1W2PNM2 257 aa8.98□□□□□ -0.97
CHD1-212ENST00000614616 DSCR10P59022 87 aa8.97□□□□□ -0.97
CHD1-212ENST00000614616 Q8NAQ8 132 aa8.97□□□□□ -0.97
CHD1-212ENST00000614616 TYMSOSQ8TAI1 123 aa8.97□□□□□ -0.97
CHD1-212ENST00000614616 PRAC1Q96KF2 57 aa8.97□□□□□ -0.97
CHD1-212ENST00000614616 A0A1W2PPR1 153 aa8.96□□□□□ -0.97
CHD1-212ENST00000614616 C9orf163Q8N9P6 203 aa8.96□□□□□ -0.98
CHD1-212ENST00000614616 RANBP2P49792 3224 aaKnown RBP8.96□□□□□ -0.98
CHD1-212ENST00000614616 CSNK1G2-AS1Q8NCQ2 148 aa8.95□□□□□ -0.98
CHD1-212ENST00000614616 XIRP2A4UGR9 3374 aa8.92□□□□□ -0.98
CHD1-212ENST00000614616 PRR26Q8N8Z3 221 aa8.91□□□□□ -0.98
CHD1-212ENST00000614616 ZNF575Q86XF7 245 aa8.91□□□□□ -0.98
CHD1-212ENST00000614616 A0A0A0MQY5 61 aa8.9□□□□□ -0.98
CHD1-212ENST00000614616 A0A0G2JQZ4 141 aa8.87□□□□□ -0.99
CHD1-212ENST00000614616 A0A1W2PNN7 141 aa8.87□□□□□ -0.99
CHD1-212ENST00000614616 CENPEQ02224 2701 aa8.87□□□□□ -0.99
CHD1-212ENST00000614616 A0A1B0GU33 70 aa8.86□□□□□ -0.99
CHD1-212ENST00000614616 RTL8CO15255 209 aa8.86□□□□□ -0.99
CHD1-212ENST00000614616 MKI67P46013 3256 aaKnown RBP8.86□□□□□ -0.99
CHD1-212ENST00000614616 A0A0D9SG42 100 aa8.85□□□□□ -0.99
CHD1-212ENST00000614616 SPINK7P58062 85 aa8.85□□□□□ -0.99
CHD1-212ENST00000614616 A0A096LNT2 108 aa8.85□□□□□ -0.99
CHD1-212ENST00000614616 EPG5Q9HCE0 2579 aa8.83□□□□□ -1
CHD1-212ENST00000614616 IGLV5-37A0A075B6J1 123 aa8.82□□□□□ -1
CHD1-212ENST00000614616 VPS13AQ96RL7 3174 aa8.82□□□□□ -1
CHD1-212ENST00000614616 ZNF861PO60384 105 aa8.82□□□□□ -1
CHD1-212ENST00000614616 CNBPP62633 177 aaKnown RBP8.82□□□□□ -1
CHD1-212ENST00000614616 SMR3AQ99954 134 aa8.8□□□□□ -1
CHD1-212ENST00000614616 MGAQ8IWI9 3026 aa8.8□□□□□ -1
CHD1-212ENST00000614616 PIEZO1Q92508 2521 aa8.8□□□□□ -1
CHD1-212ENST00000614616 FASNP49327 2511 aaKnown RBP8.79□□□□□ -1
CHD1-212ENST00000614616 HRES1P13985 223 aa8.79□□□□□ -1
CHD1-212ENST00000614616 CELSR3Q9NYQ7 3312 aa8.78□□□□□ -1
CHD1-212ENST00000614616 Q8N1X5 172 aa8.78□□□□□ -1
CHD1-212ENST00000614616 NBDYA0A0U1RRE5 68 aa8.77□□□□□ -1.01
CHD1-212ENST00000614616 LINC00612Q8N6U2 182 aa8.77□□□□□ -1.01
CHD1-212ENST00000614616 TRIOO75962 3097 aa8.77□□□□□ -1.01
CHD1-212ENST00000614616 KRTAP16-1A8MUX0 517 aa8.74□□□□□ -1.01
CHD1-212ENST00000614616 GIG44P09565 113 aaPredicted RBP8.74□□□□□ -1.01
CHD1-212ENST00000614616 KRTAP10-9P60411 292 aa8.74□□□□□ -1.01
CHD1-212ENST00000614616 LINC00483Q53H64 154 aa8.72□□□□□ -1.01
CHD1-212ENST00000614616 FREM2Q5SZK8 3169 aa8.72□□□□□ -1.01
CHD1-212ENST00000614616 DSPP15924 2871 aaKnown RBP8.71□□□□□ -1.02
CHD1-212ENST00000614616 CHD6Q8TD26 2715 aa8.71□□□□□ -1.02
CHD1-212ENST00000614616 LINC00304Q8N9R0 145 aa8.69□□□□□ -1.02
CHD1-212ENST00000614616 A6NN06 94 aa8.69□□□□□ -1.02
CHD1-212ENST00000614616 MMP24-AS1A0A0U1RRL7 71 aa8.67□□□□□ -1.02
CHD1-212ENST00000614616 ROMO1P60602 79 aa8.66□□□□□ -1.02
CHD1-212ENST00000614616 FRYQ5TBA9 3013 aa8.66□□□□□ -1.02
CHD1-212ENST00000614616 GCN1Q92616 2671 aaKnown RBP8.64□□□□□ -1.03
CHD1-212ENST00000614616 C9orf92A6NGG3 77 aa8.64□□□□□ -1.03
CHD1-212ENST00000614616 TRANK1O15050 2925 aa8.64□□□□□ -1.03
CHD1-212ENST00000614616 C19orf73Q9NVV2 129 aa8.61□□□□□ -1.03
CHD1-212ENST00000614616 IGLV7-43P04211 117 aa8.61□□□□□ -1.03
CHD1-212ENST00000614616 NBEAL1Q6ZS30 2694 aa8.61□□□□□ -1.03
CHD1-212ENST00000614616 KMT2BQ9UMN6 2715 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms