RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 SPRR1BP22528 89 aa9.08□□□□□ -0.96
CSNK1E-215ENST00000612795 IFI27L1Q96BM0 104 aa9.08□□□□□ -0.96
CSNK1E-215ENST00000612795 USH2AO75445 5202 aa9.07□□□□□ -0.96
CSNK1E-215ENST00000612795 NDUFC2O95298 119 aa9.07□□□□□ -0.96
CSNK1E-215ENST00000612795 CD164Q04900 197 aa9.07□□□□□ -0.96
CSNK1E-215ENST00000612795 Q6Q795 121 aa9.07□□□□□ -0.96
CSNK1E-215ENST00000612795 TRAPPC1Q9Y5R8 145 aa9.07□□□□□ -0.96
CSNK1E-215ENST00000612795 CFC1P0CG37 223 aa9.06□□□□□ -0.96
CSNK1E-215ENST00000612795 TSPEAR-AS2P59090 65 aa9.06□□□□□ -0.96
CSNK1E-215ENST00000612795 RPS10P5Q9NQ39 176 aa9.05□□□□□ -0.96
CSNK1E-215ENST00000612795 CBY1Q9Y3M2 126 aa9.05□□□□□ -0.96
CSNK1E-215ENST00000612795 TMEM218A2RU14 115 aa9.04□□□□□ -0.96
CSNK1E-215ENST00000612795 IFITM2Q01629 132 aa9.04□□□□□ -0.96
CSNK1E-215ENST00000612795 NPC2P61916 151 aa9.03□□□□□ -0.96
CSNK1E-215ENST00000612795 Q1RN00 199 aa9.03□□□□□ -0.96
CSNK1E-215ENST00000612795 C1orf195Q5TG92 126 aa9.03□□□□□ -0.96
CSNK1E-215ENST00000612795 PRO1933Q9H354 126 aa9.03□□□□□ -0.96
CSNK1E-215ENST00000612795 LEPROTO15243 131 aa9.02□□□□□ -0.97
CSNK1E-215ENST00000612795 UQCC3Q6UW78 93 aa9.02□□□□□ -0.97
CSNK1E-215ENST00000612795 DHRS4-AS1Q9P1J3 65 aa9.02□□□□□ -0.97
CSNK1E-215ENST00000612795 H0Y8G0 127 aa9.01□□□□□ -0.97
CSNK1E-215ENST00000612795 Q5XG85 94 aa9.01□□□□□ -0.97
CSNK1E-215ENST00000612795 J3QQQ9 107 aa8.99□□□□□ -0.97
CSNK1E-215ENST00000612795 NMUP48645 174 aa8.98□□□□□ -0.97
CSNK1E-215ENST00000612795 TAL2Q16559 108 aa8.98□□□□□ -0.97
CSNK1E-215ENST00000612795 CLLU1Q5K131 121 aa8.98□□□□□ -0.97
CSNK1E-215ENST00000612795 SOSTDC1Q6X4U4 206 aa8.98□□□□□ -0.97
CSNK1E-215ENST00000612795 DEFB105AQ8NG35 78 aa8.98□□□□□ -0.97
CSNK1E-215ENST00000612795 CHCHD1Q96BP2 118 aaKnown RBP8.98□□□□□ -0.97
CSNK1E-215ENST00000612795 LGALS3P17931 250 aaKnown RBP8.97□□□□□ -0.97
CSNK1E-215ENST00000612795 RHEBQ15382 184 aa8.97□□□□□ -0.97
CSNK1E-215ENST00000612795 SMIM29Q86T20 159 aa8.97□□□□□ -0.97
CSNK1E-215ENST00000612795 OR13C6PQ8NH95 151 aa8.97□□□□□ -0.97
CSNK1E-215ENST00000612795 AKR1D1P51857 326 aa8.96□□□□□ -0.98
CSNK1E-215ENST00000612795 HERVK_113P61574 105 aa8.96□□□□□ -0.98
CSNK1E-215ENST00000612795 FCGBPQ9Y6R7 5405 aaPredicted RBP8.95□□□□□ -0.98
CSNK1E-215ENST00000612795 EIF4EBP3O60516 100 aaPredicted RBP8.95□□□□□ -0.98
CSNK1E-215ENST00000612795 KRTAP9-8Q9BYQ0 159 aa8.94□□□□□ -0.98
CSNK1E-215ENST00000612795 TEX49A0A1B0GTD5 131 aa8.93□□□□□ -0.98
CSNK1E-215ENST00000612795 HSBP1O75506 76 aa8.92□□□□□ -0.98
CSNK1E-215ENST00000612795 COX7BP24311 80 aa8.92□□□□□ -0.98
CSNK1E-215ENST00000612795 PLNP26678 52 aa8.92□□□□□ -0.98
CSNK1E-215ENST00000612795 A0A0G2JQZ4 141 aa8.91□□□□□ -0.98
CSNK1E-215ENST00000612795 ELOF1P60002 83 aaKnown RBP8.91□□□□□ -0.98
CSNK1E-215ENST00000612795 ADAMTSL4-AS1Q5T5F5 129 aa8.91□□□□□ -0.98
CSNK1E-215ENST00000612795 ATP11AUNQ6ZP68 121 aa8.91□□□□□ -0.98
CSNK1E-215ENST00000612795 TCL1BO95988 128 aa8.9□□□□□ -0.98
CSNK1E-215ENST00000612795 SPANXCQ9NY87 97 aa8.9□□□□□ -0.98
CSNK1E-215ENST00000612795 A0A0J9YXY3 114 aa8.89□□□□□ -0.99
CSNK1E-215ENST00000612795 C6orf99Q4VX62 202 aa8.88□□□□□ -0.99
CSNK1E-215ENST00000612795 DPM2O94777 84 aa8.87□□□□□ -0.99
CSNK1E-215ENST00000612795 KRTAP19-1Q8IUB9 90 aa8.87□□□□□ -0.99
CSNK1E-215ENST00000612795 SPANXDQ9BXN6 97 aa8.87□□□□□ -0.99
CSNK1E-215ENST00000612795 PCP2Q8IVA1 136 aa8.86□□□□□ -0.99
CSNK1E-215ENST00000612795 C20orf202A1L168 122 aa8.85□□□□□ -0.99
CSNK1E-215ENST00000612795 LEPROTL1O95214 131 aa8.85□□□□□ -0.99
CSNK1E-215ENST00000612795 SYNE2Q8WXH0 6885 aaKnown RBP8.85□□□□□ -0.99
CSNK1E-215ENST00000612795 IGKCP01834 107 aa8.84□□□□□ -0.99
CSNK1E-215ENST00000612795 C10orf91Q5T1B1 145 aa8.84□□□□□ -0.99
CSNK1E-215ENST00000612795 Q75L30 129 aa8.84□□□□□ -0.99
CSNK1E-215ENST00000612795 LINC00308Q8TCZ7 52 aa8.84□□□□□ -0.99
CSNK1E-215ENST00000612795 PMCHL2Q9BQD1 86 aa8.84□□□□□ -0.99
CSNK1E-215ENST00000612795 MACF1Q9UPN3 7388 aaKnown RBP8.84□□□□□ -0.99
CSNK1E-215ENST00000612795 OBSCN-AS1Q96MR7 158 aa8.82□□□□□ -1
CSNK1E-215ENST00000612795 IGLV5-48A0A075B6I7 105 aa8.81□□□□□ -1
CSNK1E-215ENST00000612795 TRBV20-1A0A075B6N2 111 aa8.78□□□□□ -1
CSNK1E-215ENST00000612795 TRBV7-6A0A0J9YX20 115 aa8.78□□□□□ -1
CSNK1E-215ENST00000612795 A0A1B0GWB2 263 aa8.78□□□□□ -1
CSNK1E-215ENST00000612795 E9PLD3 99 aa8.78□□□□□ -1
CSNK1E-215ENST00000612795 MT2AP02795 61 aa8.78□□□□□ -1
CSNK1E-215ENST00000612795 LINC00518Q8N0U6 118 aa8.78□□□□□ -1
CSNK1E-215ENST00000612795 LITAFQ99732 161 aa8.78□□□□□ -1
CSNK1E-215ENST00000612795 HSPB8Q9UJY1 196 aa8.78□□□□□ -1
CSNK1E-215ENST00000612795 LCE2BO14633 110 aa8.77□□□□□ -1.01
CSNK1E-215ENST00000612795 FABP4P15090 132 aa8.76□□□□□ -1.01
CSNK1E-215ENST00000612795 F8WEM9 126 aa8.75□□□□□ -1.01
CSNK1E-215ENST00000612795 TIMM17BO60830 172 aa8.75□□□□□ -1.01
CSNK1E-215ENST00000612795 SERF1AO75920 110 aa8.74□□□□□ -1.01
CSNK1E-215ENST00000612795 S100A1P23297 94 aa8.74□□□□□ -1.01
CSNK1E-215ENST00000612795 APOC3P02656 99 aa8.73□□□□□ -1.01
CSNK1E-215ENST00000612795 NDUFA5Q16718 116 aa8.73□□□□□ -1.01
CSNK1E-215ENST00000612795 SNAPINO95295 136 aa8.72□□□□□ -1.01
CSNK1E-215ENST00000612795 Q96NJ1 140 aa8.72□□□□□ -1.01
CSNK1E-215ENST00000612795 MT1FP04733 61 aa8.71□□□□□ -1.02
CSNK1E-215ENST00000612795 NHP2Q9NX24 153 aaKnown RBP8.71□□□□□ -1.02
CSNK1E-215ENST00000612795 LINC00310P59036 64 aa8.7□□□□□ -1.02
CSNK1E-215ENST00000612795 LINC00846Q9NV44 126 aa8.7□□□□□ -1.02
CSNK1E-215ENST00000612795 TRBV7-7A0A0K0K1E9 115 aa8.69□□□□□ -1.02
CSNK1E-215ENST00000612795 A4D1N5 150 aa8.69□□□□□ -1.02
CSNK1E-215ENST00000612795 ZNF815PA8K554 130 aa8.69□□□□□ -1.02
CSNK1E-215ENST00000612795 KRTAP10-10P60014 251 aa8.69□□□□□ -1.02
CSNK1E-215ENST00000612795 SVBPQ8N300 66 aa8.69□□□□□ -1.02
CSNK1E-215ENST00000612795 YPEL4Q96NS1 127 aa8.69□□□□□ -1.02
CSNK1E-215ENST00000612795 FAM236DA0A1B0GTK5 79 aa8.68□□□□□ -1.02
CSNK1E-215ENST00000612795 A6NDN8 102 aa8.68□□□□□ -1.02
CSNK1E-215ENST00000612795 FAM236CP0DP71 79 aa8.68□□□□□ -1.02
CSNK1E-215ENST00000612795 CLEC2BQ92478 149 aa8.67□□□□□ -1.02
CSNK1E-215ENST00000612795 KRTAP9-3Q9BYQ3 159 aa8.67□□□□□ -1.02
CSNK1E-215ENST00000612795 Q6JHZ5 121 aa8.66□□□□□ -1.02
CSNK1E-215ENST00000612795 IGFL1Q6UW32 110 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 489 ms