RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 Q6ZQT0 140 aa9.39□□□□□ -0.91
MUC1-223ENST00000611571 REG3GQ6UW15 175 aa9.38□□□□□ -0.91
MUC1-223ENST00000611571 MRPL55Q7Z7F7 128 aaKnown RBP9.38□□□□□ -0.91
MUC1-223ENST00000611571 C22orf24Q9Y442 160 aa9.38□□□□□ -0.91
MUC1-223ENST00000611571 DCHS2Q6V1P9 2916 aa9.37□□□□□ -0.91
MUC1-223ENST00000611571 CR1P17927 2039 aa9.37□□□□□ -0.91
MUC1-223ENST00000611571 FAM104AQ969W3 186 aa9.37□□□□□ -0.91
MUC1-223ENST00000611571 SMIM29Q86T20 159 aa9.36□□□□□ -0.91
MUC1-223ENST00000611571 ST20-AS1Q8NBB2 130 aa9.36□□□□□ -0.91
MUC1-223ENST00000611571 LINC00167Q96N53 147 aa9.36□□□□□ -0.91
MUC1-223ENST00000611571 PCOTHQ58A44 107 aa9.36□□□□□ -0.91
MUC1-223ENST00000611571 Q8NAQ8 132 aa9.36□□□□□ -0.91
MUC1-223ENST00000611571 C2orf48Q96LS8 159 aa9.35□□□□□ -0.91
MUC1-223ENST00000611571 TRBV7-6A0A0J9YX20 115 aa9.35□□□□□ -0.91
MUC1-223ENST00000611571 C19orf73Q9NVV2 129 aa9.35□□□□□ -0.91
MUC1-223ENST00000611571 Q9BRP9 147 aa9.35□□□□□ -0.91
MUC1-223ENST00000611571 Q6ZRP5 223 aa9.33□□□□□ -0.92
MUC1-223ENST00000611571 A6NED7 52 aa9.32□□□□□ -0.92
MUC1-223ENST00000611571 CXCL6P80162 114 aa9.31□□□□□ -0.92
MUC1-223ENST00000611571 FAM168BA1KXE4 195 aa9.31□□□□□ -0.92
MUC1-223ENST00000611571 C4orf48Q5BLP8 95 aa9.31□□□□□ -0.92
MUC1-223ENST00000611571 STAB2Q8WWQ8 2551 aa9.31□□□□□ -0.92
MUC1-223ENST00000611571 CUBNO60494 3623 aa9.31□□□□□ -0.92
MUC1-223ENST00000611571 A0A0G2JQZ4 141 aa9.31□□□□□ -0.92
MUC1-223ENST00000611571 A0A1W2PNN7 141 aa9.31□□□□□ -0.92
MUC1-223ENST00000611571 ELOF1P60002 83 aaKnown RBP9.31□□□□□ -0.92
MUC1-223ENST00000611571 ATP5EP56381 51 aaPredicted RBP9.3□□□□□ -0.92
MUC1-223ENST00000611571 CASC2Q6XLA1 102 aa9.3□□□□□ -0.92
MUC1-223ENST00000611571 HRNRQ86YZ3 2850 aaPredicted RBP9.29□□□□□ -0.92
MUC1-223ENST00000611571 IGHV6-1A0A0B4J1U7 121 aa9.29□□□□□ -0.92
MUC1-223ENST00000611571 RETNLBQ9BQ08 111 aa9.28□□□□□ -0.92
MUC1-223ENST00000611571 LINC01556Q5JQF7 62 aa9.27□□□□□ -0.92
MUC1-223ENST00000611571 IL17DQ8TAD2 202 aa9.27□□□□□ -0.92
MUC1-223ENST00000611571 VPREB1P12018 145 aa9.27□□□□□ -0.93
MUC1-223ENST00000611571 KRTAP10-3P60369 221 aa9.27□□□□□ -0.93
MUC1-223ENST00000611571 IGLV6-57P01721 117 aa9.26□□□□□ -0.93
MUC1-223ENST00000611571 C1orf195Q5TG92 126 aa9.26□□□□□ -0.93
MUC1-223ENST00000611571 SERTAD4-AS1Q5TG53 156 aa9.26□□□□□ -0.93
MUC1-223ENST00000611571 LY6G6CO95867 125 aa9.25□□□□□ -0.93
MUC1-223ENST00000611571 HCG22E2RYF7 251 aa9.25□□□□□ -0.93
MUC1-223ENST00000611571 CHTF8P0CG12 524 aa9.25□□□□□ -0.93
MUC1-223ENST00000611571 RPL37AP61513 92 aaKnown RBP9.25□□□□□ -0.93
MUC1-223ENST00000611571 CIRBP-AS1Q8TBR5 109 aa9.25□□□□□ -0.93
MUC1-223ENST00000611571 CELSR1Q9NYQ6 3014 aa9.25□□□□□ -0.93
MUC1-223ENST00000611571 APCP25054 2843 aa9.24□□□□□ -0.93
MUC1-223ENST00000611571 PRR15LQ9BU68 103 aa9.24□□□□□ -0.93
MUC1-223ENST00000611571 CSMD1Q96PZ7 3565 aa9.24□□□□□ -0.93
MUC1-223ENST00000611571 H0Y9P7 68 aa9.23□□□□□ -0.93
MUC1-223ENST00000611571 LOC110117498A0A087WWA1 95 aa9.23□□□□□ -0.93
MUC1-223ENST00000611571 V9GYY9 64 aa9.23□□□□□ -0.93
MUC1-223ENST00000611571 LINC00474Q9P2X8 69 aa9.22□□□□□ -0.93
MUC1-223ENST00000611571 Q6ZRX8 168 aa9.21□□□□□ -0.93
MUC1-223ENST00000611571 LINC00588Q9Y4M8 146 aa9.21□□□□□ -0.93
MUC1-223ENST00000611571 PMAIP1Q13794 54 aa9.21□□□□□ -0.94
MUC1-223ENST00000611571 PHF5AQ7RTV0 110 aaKnown RBP9.21□□□□□ -0.94
MUC1-223ENST00000611571 LINC00476Q8WZB0 136 aa9.21□□□□□ -0.94
MUC1-223ENST00000611571 KRTAP24-1Q3LI83 254 aa9.2□□□□□ -0.94
MUC1-223ENST00000611571 SMG1Q96Q15 3661 aaKnown RBP9.2□□□□□ -0.94
MUC1-223ENST00000611571 RPS28P62857 69 aaKnown RBP9.2□□□□□ -0.94
MUC1-223ENST00000611571 Q8NBF4 154 aa9.2□□□□□ -0.94
MUC1-223ENST00000611571 NIPBLQ6KC79 2804 aaeCLIP9.19□□□□□ -0.94
MUC1-223ENST00000611571 KRTAP1-3Q8IUG1 177 aa9.19□□□□□ -0.94
MUC1-223ENST00000611571 LINC00528Q8N1L1 170 aa9.17□□□□□ -0.94
MUC1-223ENST00000611571 MXRA5Q9NR99 2828 aa9.17□□□□□ -0.94
MUC1-223ENST00000611571 C1orf64Q8NEQ6 169 aa9.16□□□□□ -0.94
MUC1-223ENST00000611571 PRR34Q9NV39 138 aa9.16□□□□□ -0.94
MUC1-223ENST00000611571 K7EQZ3 153 aa9.16□□□□□ -0.94
MUC1-223ENST00000611571 C15orf56Q8N910 161 aa9.16□□□□□ -0.94
MUC1-223ENST00000611571 TRBV7-4A0A0J9YYF1 115 aa9.15□□□□□ -0.95
MUC1-223ENST00000611571 GVQW2A0A096LPI5 108 aaPredicted RBP9.14□□□□□ -0.95
MUC1-223ENST00000611571 CASC10Q5T4H9 136 aa9.14□□□□□ -0.95
MUC1-223ENST00000611571 Q8N377 158 aa9.13□□□□□ -0.95
MUC1-223ENST00000611571 SVEP1Q4LDE5 3571 aa9.13□□□□□ -0.95
MUC1-223ENST00000611571 KRTAP10-11P60412 298 aa9.12□□□□□ -0.95
MUC1-223ENST00000611571 LINC00612Q8N6U2 182 aa9.12□□□□□ -0.95
MUC1-223ENST00000611571 Q8NDZ9 215 aa9.12□□□□□ -0.95
MUC1-223ENST00000611571 KMT2BQ9UMN6 2715 aaPredicted RBP9.11□□□□□ -0.95
MUC1-223ENST00000611571 CYSTM1Q9H1C7 97 aa9.11□□□□□ -0.95
MUC1-223ENST00000611571 PRO0628Q9UI54 55 aa9.11□□□□□ -0.95
MUC1-223ENST00000611571 EPM2AB3EWF7 344 aa9.11□□□□□ -0.95
MUC1-223ENST00000611571 KRTAP1-1Q07627 177 aa9.11□□□□□ -0.95
MUC1-223ENST00000611571 ZNF706Q9Y5V0 76 aaPredicted RBP9.1□□□□□ -0.95
MUC1-223ENST00000611571 H7BZZ5 65 aa9.1□□□□□ -0.95
MUC1-223ENST00000611571 MOBPQ13875 183 aa9.09□□□□□ -0.95
MUC1-223ENST00000611571 F8WDY8 70 aa9.09□□□□□ -0.95
MUC1-223ENST00000611571 H3BNG1 76 aa9.09□□□□□ -0.95
MUC1-223ENST00000611571 ERC2-IT1O76042 136 aa9.09□□□□□ -0.95
MUC1-223ENST00000611571 SPINK1P00995 79 aa9.09□□□□□ -0.95
MUC1-223ENST00000611571 IGLV5-52A0A0A0MRZ9 124 aa9.08□□□□□ -0.96
MUC1-223ENST00000611571 MDFIQ99750 246 aa9.08□□□□□ -0.96
MUC1-223ENST00000611571 KCNQ1DNQ9H478 68 aa9.07□□□□□ -0.96
MUC1-223ENST00000611571 SEC61GP60059 68 aa9.07□□□□□ -0.96
MUC1-223ENST00000611571 LINC00336Q6ZUF6 198 aa9.07□□□□□ -0.96
MUC1-223ENST00000611571 BCE1O60756 84 aa9.07□□□□□ -0.96
MUC1-223ENST00000611571 IGLV1-50A0A075B6I6 118 aa9.06□□□□□ -0.96
MUC1-223ENST00000611571 DNAH10OSP0CZ25 163 aa9.05□□□□□ -0.96
MUC1-223ENST00000611571 SPAG11AQ6PDA7 123 aa9.05□□□□□ -0.96
MUC1-223ENST00000611571 OBSCN-AS1Q96MR7 158 aa9.05□□□□□ -0.96
MUC1-223ENST00000611571 hDV103S1A0JD37 113 aa9.05□□□□□ -0.96
MUC1-223ENST00000611571 KLKP1Q107X0 134 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms