RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 TSC22D3Q99576 134 aa-1.48□□□□□ -2.65
HDDC2-207ENST00000608532 CGREF1Q99674 301 aa-1.48□□□□□ -2.65
HDDC2-207ENST00000608532 ANKRD50Q9ULJ7 1429 aa-1.49□□□□□ -2.65
HDDC2-207ENST00000608532 MLH3Q9UHC1 1453 aa-1.49□□□□□ -2.65
HDDC2-207ENST00000608532 TRBV25-1A0A075B6N4 114 aa-1.49□□□□□ -2.65
HDDC2-207ENST00000608532 PSMG4Q5JS54 123 aa-1.49□□□□□ -2.65
HDDC2-207ENST00000608532 CACFD1Q9UGQ2 172 aa-1.49□□□□□ -2.65
HDDC2-207ENST00000608532 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.49□□□□□ -2.65
HDDC2-207ENST00000608532 UBR3Q6ZT12 1888 aa-1.5□□□□□ -2.65
HDDC2-207ENST00000608532 MAP3K1Q13233 1512 aa-1.5□□□□□ -2.65
HDDC2-207ENST00000608532 ACACBO00763 2458 aa-1.5□□□□□ -2.65
HDDC2-207ENST00000608532 A0A1B0GV90 55 aa-1.5□□□□□ -2.65
HDDC2-207ENST00000608532 H3BQ15 152 aa-1.5□□□□□ -2.65
HDDC2-207ENST00000608532 H7BZZ5 65 aa-1.5□□□□□ -2.65
HDDC2-207ENST00000608532 PPP3R1P63098 170 aa-1.5□□□□□ -2.65
HDDC2-207ENST00000608532 SVBPQ8N300 66 aa-1.5□□□□□ -2.65
HDDC2-207ENST00000608532 RGPD3A6NKT7 1758 aaPredicted RBP-1.5□□□□□ -2.65
HDDC2-207ENST00000608532 RGPD4Q7Z3J3 1758 aa-1.5□□□□□ -2.65
HDDC2-207ENST00000608532 MYH4Q9Y623 1939 aa-1.5□□□□□ -2.65
HDDC2-207ENST00000608532 MAGI2Q86UL8 1455 aa-1.5□□□□□ -2.65
HDDC2-207ENST00000608532 RGPD8O14715 1765 aaPredicted RBP-1.51□□□□□ -2.65
HDDC2-207ENST00000608532 RGPD5Q99666 1765 aa-1.51□□□□□ -2.65
HDDC2-207ENST00000608532 DLEU1O43261 78 aa-1.51□□□□□ -2.65
HDDC2-207ENST00000608532 GNG4P50150 75 aa-1.51□□□□□ -2.65
HDDC2-207ENST00000608532 S100A12P80511 92 aa-1.51□□□□□ -2.65
HDDC2-207ENST00000608532 PRDM15P57071 1507 aaPredicted RBP-1.51□□□□□ -2.65
HDDC2-207ENST00000608532 EIF4G3O43432 1585 aaKnown RBP-1.51□□□□□ -2.65
HDDC2-207ENST00000608532 TIAM2Q8IVF5 1701 aa-1.52□□□□□ -2.65
HDDC2-207ENST00000608532 NDUFA3O95167 84 aa-1.52□□□□□ -2.65
HDDC2-207ENST00000608532 MT1HP80294 61 aa-1.52□□□□□ -2.65
HDDC2-207ENST00000608532 VAMP8Q9BV40 100 aa-1.52□□□□□ -2.65
HDDC2-207ENST00000608532 ALKQ9UM73 1620 aa-1.52□□□□□ -2.65
HDDC2-207ENST00000608532 CORTO00230 105 aa-1.53□□□□□ -2.65
HDDC2-207ENST00000608532 HMGN1P05114 100 aa-1.53□□□□□ -2.65
HDDC2-207ENST00000608532 IGLC2P0DOY2 106 aa-1.53□□□□□ -2.65
HDDC2-207ENST00000608532 IGLC3P0DOY3 106 aa-1.53□□□□□ -2.65
HDDC2-207ENST00000608532 RANBP2P49792 3224 aaKnown RBP-1.53□□□□□ -2.65
HDDC2-207ENST00000608532 KRTDAPP60985 99 aa-1.53□□□□□ -2.65
HDDC2-207ENST00000608532 SUPT6HQ7KZ85 1726 aaKnown RBP-1.53□□□□□ -2.65
HDDC2-207ENST00000608532 FAM135AQ9P2D6 1515 aa-1.53□□□□□ -2.65
HDDC2-207ENST00000608532 PMCHL1Q16048 86 aa-1.54□□□□□ -2.66
HDDC2-207ENST00000608532 RPL13AP3Q6NVV1 102 aa-1.54□□□□□ -2.66
HDDC2-207ENST00000608532 TRGV9Q99603 122 aa-1.54□□□□□ -2.66
HDDC2-207ENST00000608532 CEP290O15078 2479 aa-1.55□□□□□ -2.66
HDDC2-207ENST00000608532 RIF1Q5UIP0 2472 aaKnown RBP-1.55□□□□□ -2.66
HDDC2-207ENST00000608532 PLXNC1O60486 1568 aa-1.55□□□□□ -2.66
HDDC2-207ENST00000608532 ZFYVE16Q7Z3T8 1539 aa-1.55□□□□□ -2.66
HDDC2-207ENST00000608532 RAPGEF2Q9Y4G8 1499 aa-1.55□□□□□ -2.66
HDDC2-207ENST00000608532 POLR1AO95602 1720 aaPredicted RBP-1.55□□□□□ -2.66
HDDC2-207ENST00000608532 USP32Q8NFA0 1604 aa-1.55□□□□□ -2.66
HDDC2-207ENST00000608532 COL12A1Q99715 3063 aa-1.55□□□□□ -2.66
HDDC2-207ENST00000608532 UBR1Q8IWV7 1749 aa-1.56□□□□□ -2.66
HDDC2-207ENST00000608532 K7EP34 96 aa-1.56□□□□□ -2.66
HDDC2-207ENST00000608532 S100A1P23297 94 aa-1.56□□□□□ -2.66
HDDC2-207ENST00000608532 KRTAP19-5Q3LI72 72 aa-1.56□□□□□ -2.66
HDDC2-207ENST00000608532 PSENENQ9NZ42 101 aa-1.56□□□□□ -2.66
HDDC2-207ENST00000608532 ABCC2Q92887 1545 aa-1.56□□□□□ -2.66
HDDC2-207ENST00000608532 LRRC7Q96NW7 1537 aa-1.56□□□□□ -2.66
HDDC2-207ENST00000608532 C5orf42Q9H799 3197 aa-1.57□□□□□ -2.66
HDDC2-207ENST00000608532 CLTCQ00610 1675 aaKnown RBP-1.57□□□□□ -2.66
HDDC2-207ENST00000608532 ANKRD36BQ8N2N9 1353 aa-1.58□□□□□ -2.66
HDDC2-207ENST00000608532 NESP48681 1621 aa-1.58□□□□□ -2.66
HDDC2-207ENST00000608532 GNGT2O14610 69 aa-1.58□□□□□ -2.66
HDDC2-207ENST00000608532 UQCRHP07919 91 aa-1.58□□□□□ -2.66
HDDC2-207ENST00000608532 COX7BP24311 80 aa-1.58□□□□□ -2.66
HDDC2-207ENST00000608532 NMSQ5H8A3 153 aa-1.58□□□□□ -2.66
HDDC2-207ENST00000608532 S4R3F8 94 aa-1.58□□□□□ -2.66
HDDC2-207ENST00000608532 FRYQ5TBA9 3013 aa-1.59□□□□□ -2.66
HDDC2-207ENST00000608532 NDUFC1O43677 76 aa-1.59□□□□□ -2.66
HDDC2-207ENST00000608532 MT-ATP8P03928 68 aa-1.59□□□□□ -2.66
HDDC2-207ENST00000608532 COX6B2Q6YFQ2 88 aa-1.59□□□□□ -2.66
HDDC2-207ENST00000608532 LRRC9Q6ZRR7 1453 aa-1.59□□□□□ -2.66
HDDC2-207ENST00000608532 WIZO95785 1651 aa-1.59□□□□□ -2.66
HDDC2-207ENST00000608532 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.59□□□□□ -2.66
HDDC2-207ENST00000608532 DOT1LQ8TEK3 1739 aa-1.6□□□□□ -2.67
HDDC2-207ENST00000608532 F8WEM9 126 aa-1.6□□□□□ -2.67
HDDC2-207ENST00000608532 MPC2O95563 127 aa-1.6□□□□□ -2.67
HDDC2-207ENST00000608532 UBE2D4Q9Y2X8 147 aa-1.6□□□□□ -2.67
HDDC2-207ENST00000608532 AP4S1Q9Y587 144 aa-1.6□□□□□ -2.67
HDDC2-207ENST00000608532 ZNF831Q5JPB2 1677 aa-1.61□□□□□ -2.67
HDDC2-207ENST00000608532 CELSR3Q9NYQ7 3312 aa-1.61□□□□□ -2.67
HDDC2-207ENST00000608532 LTN1O94822 1766 aa-1.61□□□□□ -2.67
HDDC2-207ENST00000608532 LINC00587B1AMM8 73 aa-1.61□□□□□ -2.67
HDDC2-207ENST00000608532 DEFB1P60022 68 aa-1.61□□□□□ -2.67
HDDC2-207ENST00000608532 TMEM203Q969S6 136 aa-1.61□□□□□ -2.67
HDDC2-207ENST00000608532 SPENQ96T58 3664 aaKnown RBP-1.61□□□□□ -2.67
HDDC2-207ENST00000608532 H0YAA0 97 aa-1.62□□□□□ -2.67
HDDC2-207ENST00000608532 PMCHL2Q9BQD1 86 aa-1.62□□□□□ -2.67
HDDC2-207ENST00000608532 C2orf88Q9BSF0 95 aa-1.62□□□□□ -2.67
HDDC2-207ENST00000608532 TLN2Q9Y4G6 2542 aa-1.62□□□□□ -2.67
HDDC2-207ENST00000608532 SPTBN5Q9NRC6 3674 aaKnown RBP-1.63□□□□□ -2.67
HDDC2-207ENST00000608532 D6R8Y8 96 aa-1.63□□□□□ -2.67
HDDC2-207ENST00000608532 LEPROTL1O95214 131 aa-1.63□□□□□ -2.67
HDDC2-207ENST00000608532 ETDBQ3ZM63 59 aa-1.63□□□□□ -2.67
HDDC2-207ENST00000608532 MUSTN1Q8IVN3 82 aa-1.63□□□□□ -2.67
HDDC2-207ENST00000608532 SERP2Q8N6R1 65 aa-1.63□□□□□ -2.67
HDDC2-207ENST00000608532 GNG8Q9UK08 70 aa-1.63□□□□□ -2.67
HDDC2-207ENST00000608532 TMEM218A2RU14 115 aa-1.64□□□□□ -2.67
HDDC2-207ENST00000608532 DEFB110Q30KQ9 67 aa-1.64□□□□□ -2.67
HDDC2-207ENST00000608532 GTF2H5Q6ZYL4 71 aa-1.64□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms