RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 MRPL55Q7Z7F7 128 aaKnown RBP4.16□□□□□ -1.74
HDDC2-205ENST00000608456 SMIM29Q86T20 159 aa4.16□□□□□ -1.74
HDDC2-205ENST00000608456 KRTAP19-1Q8IUB9 90 aa4.16□□□□□ -1.74
HDDC2-205ENST00000608456 C1orf64Q8NEQ6 169 aa4.16□□□□□ -1.74
HDDC2-205ENST00000608456 LINC00588Q9Y4M8 146 aa4.16□□□□□ -1.74
HDDC2-205ENST00000608456 PTPN13Q12923 2485 aa4.16□□□□□ -1.74
HDDC2-205ENST00000608456 NCOR2Q9Y618 2525 aa4.16□□□□□ -1.74
HDDC2-205ENST00000608456 PKD1L2Q7Z442 2459 aa4.15□□□□□ -1.74
HDDC2-205ENST00000608456 DNAH10OSP0CZ25 163 aa4.15□□□□□ -1.75
HDDC2-205ENST00000608456 Q9BRP9 147 aa4.15□□□□□ -1.75
HDDC2-205ENST00000608456 LIMD2Q9BT23 127 aa4.15□□□□□ -1.75
HDDC2-205ENST00000608456 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.14□□□□□ -1.75
HDDC2-205ENST00000608456 C3orf84H3BNL1 204 aa4.14□□□□□ -1.75
HDDC2-205ENST00000608456 PMAIP1Q13794 54 aa4.14□□□□□ -1.75
HDDC2-205ENST00000608456 FAM229BQ4G0N7 80 aa4.14□□□□□ -1.75
HDDC2-205ENST00000608456 LCE3BQ5TA77 95 aa4.14□□□□□ -1.75
HDDC2-205ENST00000608456 Q8N9L7 120 aa4.14□□□□□ -1.75
HDDC2-205ENST00000608456 MPLKIPQ8TAP9 179 aa4.14□□□□□ -1.75
HDDC2-205ENST00000608456 ASH1LQ9NR48 2969 aaKnown RBP4.14□□□□□ -1.75
HDDC2-205ENST00000608456 PKIGQ9Y2B9 76 aa4.14□□□□□ -1.75
HDDC2-205ENST00000608456 CELSR1Q9NYQ6 3014 aa4.13□□□□□ -1.75
HDDC2-205ENST00000608456 KRTAP10-3P60369 221 aa4.13□□□□□ -1.75
HDDC2-205ENST00000608456 KRTAP3-1Q9BYR8 98 aa4.13□□□□□ -1.75
HDDC2-205ENST00000608456 CHD6Q8TD26 2715 aa4.13□□□□□ -1.75
HDDC2-205ENST00000608456 JMJD1CQ15652 2540 aa4.13□□□□□ -1.75
HDDC2-205ENST00000608456 MXRA5Q9NR99 2828 aa4.12□□□□□ -1.75
HDDC2-205ENST00000608456 H0Y9J4 135 aa4.12□□□□□ -1.75
HDDC2-205ENST00000608456 PSCAO43653 123 aa4.12□□□□□ -1.75
HDDC2-205ENST00000608456 SEC61GP60059 68 aa4.12□□□□□ -1.75
HDDC2-205ENST00000608456 WFDC10BQ8IUB3 73 aa4.12□□□□□ -1.75
HDDC2-205ENST00000608456 B9D2Q9BPU9 175 aa4.12□□□□□ -1.75
HDDC2-205ENST00000608456 FN1P02751 2386 aaKnown RBP4.11□□□□□ -1.75
HDDC2-205ENST00000608456 FAM208BQ5VWN6 2430 aa4.11□□□□□ -1.75
HDDC2-205ENST00000608456 TRAV22A0A0B4J277 110 aa4.11□□□□□ -1.75
HDDC2-205ENST00000608456 KRTAP29-1A8MX34 341 aaPredicted RBP4.11□□□□□ -1.75
HDDC2-205ENST00000608456 DEFB4AO15263 64 aa4.11□□□□□ -1.75
HDDC2-205ENST00000608456 HTN3P15516 51 aa4.11□□□□□ -1.75
HDDC2-205ENST00000608456 SPRR1BP22528 89 aa4.11□□□□□ -1.75
HDDC2-205ENST00000608456 DEFB105AQ8NG35 78 aa4.11□□□□□ -1.75
HDDC2-205ENST00000608456 SPTBN4Q9H254 2564 aa4.11□□□□□ -1.75
HDDC2-205ENST00000608456 HIVEP2P31629 2446 aa4.11□□□□□ -1.75
HDDC2-205ENST00000608456 RELNP78509 3460 aa4.11□□□□□ -1.75
HDDC2-205ENST00000608456 CACNA1AO00555 2505 aa4.1□□□□□ -1.75
HDDC2-205ENST00000608456 IGKV2D-24A0A075B6R9 120 aa4.1□□□□□ -1.75
HDDC2-205ENST00000608456 UBE2BP63146 152 aa4.1□□□□□ -1.75
HDDC2-205ENST00000608456 SERTAD4-AS1Q5TG53 156 aa4.1□□□□□ -1.75
HDDC2-205ENST00000608456 REG3GQ6UW15 175 aa4.1□□□□□ -1.75
HDDC2-205ENST00000608456 TEX15Q9BXT5 2789 aa4.1□□□□□ -1.75
HDDC2-205ENST00000608456 MAP1AP78559 2803 aaPredicted RBP4.1□□□□□ -1.75
HDDC2-205ENST00000608456 LRRK2Q5S007 2527 aa4.1□□□□□ -1.75
HDDC2-205ENST00000608456 CHD8Q9HCK8 2581 aa4.09□□□□□ -1.75
HDDC2-205ENST00000608456 SVEP1Q4LDE5 3571 aa4.09□□□□□ -1.75
HDDC2-205ENST00000608456 LOC101927531A0A1B0GV80 90 aa4.09□□□□□ -1.75
HDDC2-205ENST00000608456 K7EQZ3 153 aa4.09□□□□□ -1.75
HDDC2-205ENST00000608456 LINC00476Q8WZB0 136 aa4.09□□□□□ -1.75
HDDC2-205ENST00000608456 TP53AIP1Q9HCN2 124 aa4.09□□□□□ -1.75
HDDC2-205ENST00000608456 UBE2AP49459 152 aa4.08□□□□□ -1.76
HDDC2-205ENST00000608456 RPL37AP61513 92 aaKnown RBP4.08□□□□□ -1.76
HDDC2-205ENST00000608456 ZFYVE26Q68DK2 2539 aa4.08□□□□□ -1.76
HDDC2-205ENST00000608456 ATP11AUNQ6ZP68 121 aa4.08□□□□□ -1.76
HDDC2-205ENST00000608456 SETXQ7Z333 2677 aaKnown RBP4.08□□□□□ -1.76
HDDC2-205ENST00000608456 MYO18BQ8IUG5 2567 aa4.08□□□□□ -1.76
HDDC2-205ENST00000608456 EPG5Q9HCE0 2579 aa4.08□□□□□ -1.76
HDDC2-205ENST00000608456 ITPR1Q14643 2758 aa4.08□□□□□ -1.76
HDDC2-205ENST00000608456 IGLV7-46A0A075B6I9 117 aa4.07□□□□□ -1.76
HDDC2-205ENST00000608456 A8MWP4 228 aa4.07□□□□□ -1.76
HDDC2-205ENST00000608456 CD164Q04900 197 aa4.07□□□□□ -1.76
HDDC2-205ENST00000608456 IGFL1Q6UW32 110 aa4.07□□□□□ -1.76
HDDC2-205ENST00000608456 Q8N9P0 234 aaPredicted RBP4.07□□□□□ -1.76
HDDC2-205ENST00000608456 LINC00208Q96KT6 92 aa4.07□□□□□ -1.76
HDDC2-205ENST00000608456 POLQO75417 2590 aa4.06□□□□□ -1.76
HDDC2-205ENST00000608456 DEFB131BA0A096LNP1 70 aa4.06□□□□□ -1.76
HDDC2-205ENST00000608456 NDUFS5O43920 106 aa4.06□□□□□ -1.76
HDDC2-205ENST00000608456 C9orf163Q8N9P6 203 aa4.06□□□□□ -1.76
HDDC2-205ENST00000608456 PIEZO1Q92508 2521 aa4.06□□□□□ -1.76
HDDC2-205ENST00000608456 SONP18583 2426 aaKnown RBP4.06□□□□□ -1.76
HDDC2-205ENST00000608456 ZANQ9Y493 2812 aa4.05□□□□□ -1.76
HDDC2-205ENST00000608456 FLNCQ14315 2725 aa4.05□□□□□ -1.76
HDDC2-205ENST00000608456 CFAP46Q8IYW2 2715 aa4.05□□□□□ -1.76
HDDC2-205ENST00000608456 C16orf90A8MZG2 172 aa4.05□□□□□ -1.76
HDDC2-205ENST00000608456 PRB1P04280 392 aa4.05□□□□□ -1.76
HDDC2-205ENST00000608456 CNBPP62633 177 aaKnown RBP4.05□□□□□ -1.76
HDDC2-205ENST00000608456 CASC2Q6XLA1 102 aa4.05□□□□□ -1.76
HDDC2-205ENST00000608456 Q75L30 129 aa4.05□□□□□ -1.76
HDDC2-205ENST00000608456 ST20-AS1Q8NBB2 130 aa4.05□□□□□ -1.76
HDDC2-205ENST00000608456 C11orf45Q8TAV5 145 aa4.05□□□□□ -1.76
HDDC2-205ENST00000608456 LINC00472Q9H8W2 130 aa4.05□□□□□ -1.76
HDDC2-205ENST00000608456 UTP20O75691 2785 aaKnown RBP4.05□□□□□ -1.76
HDDC2-205ENST00000608456 ITPR3Q14573 2671 aa4.05□□□□□ -1.76
HDDC2-205ENST00000608456 COL12A1Q99715 3063 aa4.04□□□□□ -1.76
HDDC2-205ENST00000608456 H0Y9P7 68 aa4.04□□□□□ -1.76
HDDC2-205ENST00000608456 C14orf177Q52M58 125 aa4.04□□□□□ -1.76
HDDC2-205ENST00000608456 Q5VV11 94 aa4.04□□□□□ -1.76
HDDC2-205ENST00000608456 PHF5AQ7RTV0 110 aaKnown RBP4.04□□□□□ -1.76
HDDC2-205ENST00000608456 KRTAP7-1Q8IUC3 87 aa4.04□□□□□ -1.76
HDDC2-205ENST00000608456 ZFHX3Q15911 3703 aa4.04□□□□□ -1.76
HDDC2-205ENST00000608456 IGSF10Q6WRI0 2623 aa4.03□□□□□ -1.76
HDDC2-205ENST00000608456 ABCA12Q86UK0 2595 aa4.03□□□□□ -1.76
HDDC2-205ENST00000608456 A0A087WSZ3 146 aa4.03□□□□□ -1.76
HDDC2-205ENST00000608456 ASB16-AS1Q495Z4 193 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms