RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 PPP1R17O96001 155 aa2.46□□□□□ -2.02
SGMS1-206ENST00000602565 KRTAP10-4P60372 401 aaPredicted RBP2.46□□□□□ -2.02
SGMS1-206ENST00000602565 RPL37P61927 97 aaKnown RBP2.46□□□□□ -2.02
SGMS1-206ENST00000602565 TMEM170BQ5T4T1 132 aa2.46□□□□□ -2.02
SGMS1-206ENST00000602565 BAGE3Q86Y29 109 aa2.46□□□□□ -2.02
SGMS1-206ENST00000602565 BAGE2Q86Y30 109 aa2.46□□□□□ -2.02
SGMS1-206ENST00000602565 NMES1Q9C002 83 aa2.46□□□□□ -2.02
SGMS1-206ENST00000602565 LINC00474Q9P2X8 69 aa2.46□□□□□ -2.02
SGMS1-206ENST00000602565 TEX15Q9BXT5 2789 aa2.46□□□□□ -2.02
SGMS1-206ENST00000602565 KALRNO60229 2985 aa2.46□□□□□ -2.02
SGMS1-206ENST00000602565 FBN2P35556 2912 aa2.46□□□□□ -2.02
SGMS1-206ENST00000602565 APC2O95996 2303 aa2.45□□□□□ -2.02
SGMS1-206ENST00000602565 SPINT3P49223 89 aa2.45□□□□□ -2.02
SGMS1-206ENST00000602565 ABCA12Q86UK0 2595 aa2.45□□□□□ -2.02
SGMS1-206ENST00000602565 WFDC6Q9BQY6 131 aa2.44□□□□□ -2.02
SGMS1-206ENST00000602565 ABRACLQ9P1F3 81 aa2.44□□□□□ -2.02
SGMS1-206ENST00000602565 R4GMQ9 66 aa2.44□□□□□ -2.02
SGMS1-206ENST00000602565 PTPRQQ9UMZ3 2332 aa2.44□□□□□ -2.02
SGMS1-206ENST00000602565 SPTAN1Q13813 2472 aaKnown RBP2.44□□□□□ -2.02
SGMS1-206ENST00000602565 CREBBPQ92793 2442 aa2.44□□□□□ -2.02
SGMS1-206ENST00000602565 LAMA1P25391 3075 aa2.44□□□□□ -2.02
SGMS1-206ENST00000602565 DOCK11Q5JSL3 2073 aa2.44□□□□□ -2.02
SGMS1-206ENST00000602565 H7BZZ5 65 aa2.43□□□□□ -2.02
SGMS1-206ENST00000602565 UBE2D3P61077 147 aa2.43□□□□□ -2.02
SGMS1-206ENST00000602565 UBE2D2P62837 147 aa2.43□□□□□ -2.02
SGMS1-206ENST00000602565 C6orf201Q7Z4U5 140 aa2.43□□□□□ -2.02
SGMS1-206ENST00000602565 Q96NJ1 140 aa2.43□□□□□ -2.02
SGMS1-206ENST00000602565 CMC2Q9NRP2 79 aa2.43□□□□□ -2.02
SGMS1-206ENST00000602565 COL12A1Q99715 3063 aa2.43□□□□□ -2.02
SGMS1-206ENST00000602565 FBN3Q75N90 2809 aa2.43□□□□□ -2.02
SGMS1-206ENST00000602565 CFAP46Q8IYW2 2715 aa2.43□□□□□ -2.02
SGMS1-206ENST00000602565 CACNA1EQ15878 2313 aa2.43□□□□□ -2.02
SGMS1-206ENST00000602565 UBR5O95071 2799 aaPredicted RBP2.43□□□□□ -2.02
SGMS1-206ENST00000602565 GCHFRP30047 84 aa2.42□□□□□ -2.02
SGMS1-206ENST00000602565 SMIM11AP58511 58 aa2.42□□□□□ -2.02
SGMS1-206ENST00000602565 HILPDAQ9Y5L2 63 aa2.42□□□□□ -2.02
SGMS1-206ENST00000602565 ARL2-SNX15V9GYD0 113 aa2.42□□□□□ -2.02
SGMS1-206ENST00000602565 F5P12259 2224 aa2.42□□□□□ -2.02
SGMS1-206ENST00000602565 SNRPGP62308 76 aaKnown RBP2.42□□□□□ -2.02
SGMS1-206ENST00000602565 NCBP2-AS2Q69YL0 99 aa2.42□□□□□ -2.02
SGMS1-206ENST00000602565 FAM103A1Q9BTL3 118 aaKnown RBP2.42□□□□□ -2.02
SGMS1-206ENST00000602565 DYNLRB1Q9NP97 96 aa2.42□□□□□ -2.02
SGMS1-206ENST00000602565 MYMXA0A1B0GTQ4 84 aa2.41□□□□□ -2.02
SGMS1-206ENST00000602565 ACYP2P14621 99 aa2.41□□□□□ -2.02
SGMS1-206ENST00000602565 SPAG11BQ08648 103 aa2.41□□□□□ -2.02
SGMS1-206ENST00000602565 SPAG11AQ6PDA7 123 aa2.41□□□□□ -2.02
SGMS1-206ENST00000602565 ITPR3Q14573 2671 aa2.4□□□□□ -2.02
SGMS1-206ENST00000602565 ATMQ13315 3056 aa2.4□□□□□ -2.02
SGMS1-206ENST00000602565 ZFHX3Q15911 3703 aa2.4□□□□□ -2.03
SGMS1-206ENST00000602565 AHCTF1Q8WYP5 2266 aa2.4□□□□□ -2.03
SGMS1-206ENST00000602565 ANKRD36A6QL64 1941 aa2.4□□□□□ -2.03
SGMS1-206ENST00000602565 CRYM-AS1A6NIL9 109 aa2.4□□□□□ -2.03
SGMS1-206ENST00000602565 PRH1P02810 166 aa2.4□□□□□ -2.03
SGMS1-206ENST00000602565 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.4□□□□□ -2.03
SGMS1-206ENST00000602565 BPESC1Q9GZL8 116 aa2.4□□□□□ -2.03
SGMS1-206ENST00000602565 BSNQ9UPA5 3926 aa2.39□□□□□ -2.03
SGMS1-206ENST00000602565 SPENQ96T58 3664 aaKnown RBP2.39□□□□□ -2.03
SGMS1-206ENST00000602565 TRGV1A0A0A0MS02 117 aa2.39□□□□□ -2.03
SGMS1-206ENST00000602565 TRAV1-2A0A0B4J238 106 aa2.39□□□□□ -2.03
SGMS1-206ENST00000602565 CCL18P55774 89 aa2.39□□□□□ -2.03
SGMS1-206ENST00000602565 SPINK9Q5DT21 86 aa2.39□□□□□ -2.03
SGMS1-206ENST00000602565 VMO1Q7Z5L0 202 aa2.39□□□□□ -2.03
SGMS1-206ENST00000602565 PCNX1Q96RV3 2341 aa2.39□□□□□ -2.03
SGMS1-206ENST00000602565 GOLGA4Q13439 2230 aaKnown RBP2.38□□□□□ -2.03
SGMS1-206ENST00000602565 MGAQ8IWI9 3026 aa2.38□□□□□ -2.03
SGMS1-206ENST00000602565 A0A1B0GWA3 101 aa2.38□□□□□ -2.03
SGMS1-206ENST00000602565 FAM223AQ8IWN6 122 aa2.38□□□□□ -2.03
SGMS1-206ENST00000602565 NDUFA4L2Q9NRX3 87 aa2.38□□□□□ -2.03
SGMS1-206ENST00000602565 CSMD1Q96PZ7 3565 aa2.37□□□□□ -2.03
SGMS1-206ENST00000602565 POLQO75417 2590 aa2.37□□□□□ -2.03
SGMS1-206ENST00000602565 HMGN2P05204 90 aaKnown RBP2.37□□□□□ -2.03
SGMS1-206ENST00000602565 SMIM11BQ8TCY0 68 aa2.37□□□□□ -2.03
SGMS1-206ENST00000602565 CRCT1Q9UGL9 99 aa2.37□□□□□ -2.03
SGMS1-206ENST00000602565 F8P00451 2351 aa2.37□□□□□ -2.03
SGMS1-206ENST00000602565 USP9YO00507 2555 aaPredicted RBP2.36□□□□□ -2.03
SGMS1-206ENST00000602565 ABCA2Q9BZC7 2435 aa2.36□□□□□ -2.03
SGMS1-206ENST00000602565 IQCF6A8MYZ5 107 aa2.36□□□□□ -2.03
SGMS1-206ENST00000602565 LEPROTL1O95214 131 aa2.36□□□□□ -2.03
SGMS1-206ENST00000602565 Q6JHZ5 121 aa2.36□□□□□ -2.03
SGMS1-206ENST00000602565 FAM167A-AS1Q96KT0 104 aa2.36□□□□□ -2.03
SGMS1-206ENST00000602565 GNG13Q9P2W3 67 aa2.36□□□□□ -2.03
SGMS1-206ENST00000602565 IFI27P40305 119 aaPredicted RBP2.35□□□□□ -2.03
SGMS1-206ENST00000602565 ZNF137PP52743 207 aa2.35□□□□□ -2.03
SGMS1-206ENST00000602565 OTOGQ6ZRI0 2925 aa2.34□□□□□ -2.03
SGMS1-206ENST00000602565 LRRK2Q5S007 2527 aa2.34□□□□□ -2.03
SGMS1-206ENST00000602565 TRBV25-1A0A075B6N4 114 aa2.34□□□□□ -2.04
SGMS1-206ENST00000602565 CEBPZOSA8MTT3 80 aa2.34□□□□□ -2.04
SGMS1-206ENST00000602565 TMEM14DPA8MWL7 114 aa2.34□□□□□ -2.04
SGMS1-206ENST00000602565 ATXN8Q156A1 80 aa2.34□□□□□ -2.04
SGMS1-206ENST00000602565 Q5VV11 94 aa2.34□□□□□ -2.04
SGMS1-206ENST00000602565 PRO1854Q9UHT4 67 aa2.34□□□□□ -2.04
SGMS1-206ENST00000602565 ITPR2Q14571 2701 aa2.34□□□□□ -2.04
SGMS1-206ENST00000602565 SPTBN1Q01082 2364 aaKnown RBP2.33□□□□□ -2.04
SGMS1-206ENST00000602565 FAM223BA6NKX1 122 aa2.33□□□□□ -2.04
SGMS1-206ENST00000602565 CHKB-CPT1BH3BT56 60 aa2.33□□□□□ -2.04
SGMS1-206ENST00000602565 H3BVH4 76 aa2.33□□□□□ -2.04
SGMS1-206ENST00000602565 PLGLAQ15195 96 aa2.33□□□□□ -2.04
SGMS1-206ENST00000602565 ATP5EP2Q5VTU8 51 aa2.33□□□□□ -2.04
SGMS1-206ENST00000602565 UBE2D4Q9Y2X8 147 aa2.33□□□□□ -2.04
SGMS1-206ENST00000602565 NF1P21359 2839 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms