RNA–Protein interactions for RNA: ENST00000601011.1

NOTCH3-206, Transcript of notch 3, humanhuman

TSL 5

Gene NOTCH3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-206ENST00000601011 DEFB116Q30KQ4 102 aa8.59□□□□□ -1.03
NOTCH3-206ENST00000601011 CASC10Q5T4H9 136 aa8.58□□□□□ -1.04
NOTCH3-206ENST00000601011 BPY2O14599 106 aa8.58□□□□□ -1.04
NOTCH3-206ENST00000601011 FAM168BA1KXE4 195 aa8.57□□□□□ -1.04
NOTCH3-206ENST00000601011 Q6ZVQ6 151 aa8.55□□□□□ -1.04
NOTCH3-206ENST00000601011 CRYGAP11844 174 aa8.54□□□□□ -1.04
NOTCH3-206ENST00000601011 SPTSSBQ8NFR3 76 aa8.54□□□□□ -1.04
NOTCH3-206ENST00000601011 A0A0G2JQZ4 141 aa8.54□□□□□ -1.04
NOTCH3-206ENST00000601011 A0A1W2PNN7 141 aa8.54□□□□□ -1.04
NOTCH3-206ENST00000601011 LINC01547P58512 204 aaPredicted RBP8.54□□□□□ -1.04
NOTCH3-206ENST00000601011 PRLHP81277 87 aa8.54□□□□□ -1.04
NOTCH3-206ENST00000601011 WFDC13Q8IUB5 93 aa8.54□□□□□ -1.04
NOTCH3-206ENST00000601011 LINC00474Q9P2X8 69 aa8.54□□□□□ -1.04
NOTCH3-206ENST00000601011 CHTF8P0CG12 524 aa8.53□□□□□ -1.04
NOTCH3-206ENST00000601011 LINC00588Q9Y4M8 146 aa8.53□□□□□ -1.04
NOTCH3-206ENST00000601011 PSPHP1O15172 72 aa8.53□□□□□ -1.04
NOTCH3-206ENST00000601011 NDUFC2O95298 119 aa8.53□□□□□ -1.04
NOTCH3-206ENST00000601011 MDFIQ99750 246 aa8.53□□□□□ -1.04
NOTCH3-206ENST00000601011 TM2D3Q9BRN9 247 aa8.52□□□□□ -1.05
NOTCH3-206ENST00000601011 K7EIL1 84 aa8.52□□□□□ -1.05
NOTCH3-206ENST00000601011 LY6G6CO95867 125 aa8.52□□□□□ -1.05
NOTCH3-206ENST00000601011 UBE2AP49459 152 aa8.52□□□□□ -1.05
NOTCH3-206ENST00000601011 Q8NDZ9 215 aa8.52□□□□□ -1.05
NOTCH3-206ENST00000601011 KIAA0087Q14695 138 aa8.52□□□□□ -1.05
NOTCH3-206ENST00000601011 Q6ZRP5 223 aa8.51□□□□□ -1.05
NOTCH3-206ENST00000601011 NDUFC2-KCTD14E9PQ53 114 aa8.5□□□□□ -1.05
NOTCH3-206ENST00000601011 M0R378 163 aa8.49□□□□□ -1.05
NOTCH3-206ENST00000601011 COX17Q14061 63 aa8.48□□□□□ -1.05
NOTCH3-206ENST00000601011 LINC00575Q6W349 94 aa8.48□□□□□ -1.05
NOTCH3-206ENST00000601011 EGFEM1PQ0D2K5 195 aa8.48□□□□□ -1.05
NOTCH3-206ENST00000601011 TRAV7A0A075B6U4 112 aa8.47□□□□□ -1.05
NOTCH3-206ENST00000601011 ST20-AS1Q8NBB2 130 aa8.46□□□□□ -1.05
NOTCH3-206ENST00000601011 NDUFS5O43920 106 aa8.46□□□□□ -1.06
NOTCH3-206ENST00000601011 DNAH10OSP0CZ25 163 aa8.46□□□□□ -1.06
NOTCH3-206ENST00000601011 SERTAD4-AS1Q5TG53 156 aa8.46□□□□□ -1.06
NOTCH3-206ENST00000601011 ATP5EP2Q5VTU8 51 aa8.46□□□□□ -1.06
NOTCH3-206ENST00000601011 LINC00336Q6ZUF6 198 aa8.46□□□□□ -1.06
NOTCH3-206ENST00000601011 FAM19A3Q7Z5A8 133 aa8.46□□□□□ -1.06
NOTCH3-206ENST00000601011 MUC7Q8TAX7 377 aa8.46□□□□□ -1.06
NOTCH3-206ENST00000601011 C7orf33Q8WU49 177 aa8.46□□□□□ -1.06
NOTCH3-206ENST00000601011 TRBV7-6A0A0J9YX20 115 aa8.45□□□□□ -1.06
NOTCH3-206ENST00000601011 C2orf48Q96LS8 159 aa8.45□□□□□ -1.06
NOTCH3-206ENST00000601011 LINC00612Q8N6U2 182 aa8.44□□□□□ -1.06
NOTCH3-206ENST00000601011 TMEM254Q8TBM7 123 aa8.44□□□□□ -1.06
NOTCH3-206ENST00000601011 IGLV9-49A0A0B4J1Y8 123 aa8.44□□□□□ -1.06
NOTCH3-206ENST00000601011 SMIM26A0A096LP01 95 aa8.43□□□□□ -1.06
NOTCH3-206ENST00000601011 C22orf24Q9Y442 160 aa8.42□□□□□ -1.06
NOTCH3-206ENST00000601011 SERP1Q9Y6X1 66 aa8.42□□□□□ -1.06
NOTCH3-206ENST00000601011 C1orf195Q5TG92 126 aa8.42□□□□□ -1.06
NOTCH3-206ENST00000601011 C15orf56Q8N910 161 aa8.42□□□□□ -1.06
NOTCH3-206ENST00000601011 LINC01556Q5JQF7 62 aa8.41□□□□□ -1.06
NOTCH3-206ENST00000601011 LINC00167Q96N53 147 aa8.41□□□□□ -1.06
NOTCH3-206ENST00000601011 SRRM2Q9UQ35 2752 aaKnown RBP8.4□□□□□ -1.07
NOTCH3-206ENST00000601011 H0Y9J4 135 aa8.4□□□□□ -1.07
NOTCH3-206ENST00000601011 SPINK6Q6UWN8 80 aa8.39□□□□□ -1.07
NOTCH3-206ENST00000601011 OXTP01178 125 aa8.39□□□□□ -1.07
NOTCH3-206ENST00000601011 Q6ZQT0 140 aa8.38□□□□□ -1.07
NOTCH3-206ENST00000601011 PHF5AQ7RTV0 110 aaKnown RBP8.38□□□□□ -1.07
NOTCH3-206ENST00000601011 MRPL55Q7Z7F7 128 aaKnown RBP8.38□□□□□ -1.07
NOTCH3-206ENST00000601011 PRR34Q9NV39 138 aa8.38□□□□□ -1.07
NOTCH3-206ENST00000601011 V9GYY9 64 aa8.37□□□□□ -1.07
NOTCH3-206ENST00000601011 PDE6GP18545 87 aa8.37□□□□□ -1.07
NOTCH3-206ENST00000601011 SMIM29Q86T20 159 aa8.37□□□□□ -1.07
NOTCH3-206ENST00000601011 PRYO14603 147 aa8.36□□□□□ -1.07
NOTCH3-206ENST00000601011 VPREB1P12018 145 aa8.36□□□□□ -1.07
NOTCH3-206ENST00000601011 COL7A1Q02388 2944 aa8.36□□□□□ -1.07
NOTCH3-206ENST00000601011 MP68P56378 58 aa8.35□□□□□ -1.07
NOTCH3-206ENST00000601011 C1orf137Q5JT78 98 aa8.35□□□□□ -1.07
NOTCH3-206ENST00000601011 LINC00208Q96KT6 92 aa8.35□□□□□ -1.07
NOTCH3-206ENST00000601011 RPS28P62857 69 aaKnown RBP8.33□□□□□ -1.08
NOTCH3-206ENST00000601011 H7BZZ5 65 aa8.33□□□□□ -1.08
NOTCH3-206ENST00000601011 REG3GQ6UW15 175 aa8.32□□□□□ -1.08
NOTCH3-206ENST00000601011 A0A087WSZ3 146 aa8.32□□□□□ -1.08
NOTCH3-206ENST00000601011 PRO0628Q9UI54 55 aa8.31□□□□□ -1.08
NOTCH3-206ENST00000601011 CHKB-CPT1BH3BT56 60 aa8.31□□□□□ -1.08
NOTCH3-206ENST00000601011 CDK2AP2O75956 126 aa8.31□□□□□ -1.08
NOTCH3-206ENST00000601011 ANAPC11Q9NYG5 84 aa8.3□□□□□ -1.08
NOTCH3-206ENST00000601011 ERC2-IT1O76042 136 aa8.29□□□□□ -1.08
NOTCH3-206ENST00000601011 IGLV6-57P01721 117 aa8.29□□□□□ -1.08
NOTCH3-206ENST00000601011 PCOTHQ58A44 107 aa8.29□□□□□ -1.08
NOTCH3-206ENST00000601011 PMAIP1Q13794 54 aa8.28□□□□□ -1.08
NOTCH3-206ENST00000601011 ELOF1P60002 83 aaKnown RBP8.27□□□□□ -1.09
NOTCH3-206ENST00000601011 B9D2Q9BPU9 175 aa8.27□□□□□ -1.09
NOTCH3-206ENST00000601011 RPL37AP61513 92 aaKnown RBP8.26□□□□□ -1.09
NOTCH3-206ENST00000601011 NDUFC1O43677 76 aa8.26□□□□□ -1.09
NOTCH3-206ENST00000601011 A6NED7 52 aa8.26□□□□□ -1.09
NOTCH3-206ENST00000601011 KRTAP1-5Q9BYS1 174 aa8.26□□□□□ -1.09
NOTCH3-206ENST00000601011 IGKV4-1P06312 121 aa8.25□□□□□ -1.09
NOTCH3-206ENST00000601011 Q9BRP9 147 aa8.25□□□□□ -1.09
NOTCH3-206ENST00000601011 DHRS4-AS1Q9P1J3 65 aa8.25□□□□□ -1.09
NOTCH3-206ENST00000601011 GVQW2A0A096LPI5 108 aaPredicted RBP8.25□□□□□ -1.09
NOTCH3-206ENST00000601011 LINC01600Q96MT4 127 aa8.24□□□□□ -1.09
NOTCH3-206ENST00000601011 Q5XG85 94 aa8.24□□□□□ -1.09
NOTCH3-206ENST00000601011 PRR15LQ9BU68 103 aa8.23□□□□□ -1.09
NOTCH3-206ENST00000601011 H3BNG1 76 aa8.23□□□□□ -1.09
NOTCH3-206ENST00000601011 C14orf177Q52M58 125 aa8.23□□□□□ -1.09
NOTCH3-206ENST00000601011 RETNLBQ9BQ08 111 aa8.22□□□□□ -1.09
NOTCH3-206ENST00000601011 IGLV5-52A0A0A0MRZ9 124 aa8.21□□□□□ -1.09
NOTCH3-206ENST00000601011 CXCL6P80162 114 aa8.21□□□□□ -1.09
NOTCH3-206ENST00000601011 NUPR2A6NF83 97 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 190.8 ms