RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 C22orf24Q9Y442 160 aa7.58□□□□□ -1.2
SHKBP1-213ENST00000597325 MUC2Q02817 5179 aa7.57□□□□□ -1.2
SHKBP1-213ENST00000597325 IGKV2-28A0A075B6P5 120 aa7.57□□□□□ -1.2
SHKBP1-213ENST00000597325 TRAV13-2A0A0B4J235 113 aa7.57□□□□□ -1.2
SHKBP1-213ENST00000597325 A0A0B4J2C4 111 aa7.57□□□□□ -1.2
SHKBP1-213ENST00000597325 GAGE10A6NGK3 116 aa7.57□□□□□ -1.2
SHKBP1-213ENST00000597325 IGKV2D-28P01615 120 aa7.57□□□□□ -1.2
SHKBP1-213ENST00000597325 UBE2BP63146 152 aa7.56□□□□□ -1.2
SHKBP1-213ENST00000597325 KRTAP7-1Q8IUC3 87 aa7.56□□□□□ -1.2
SHKBP1-213ENST00000597325 LINC00528Q8N1L1 170 aa7.56□□□□□ -1.2
SHKBP1-213ENST00000597325 CIRBP-AS1Q8TBR5 109 aa7.56□□□□□ -1.2
SHKBP1-213ENST00000597325 C7orf33Q8WU49 177 aa7.56□□□□□ -1.2
SHKBP1-213ENST00000597325 CBY1Q9Y3M2 126 aa7.56□□□□□ -1.2
SHKBP1-213ENST00000597325 CFC1BP0CG36 223 aa7.55□□□□□ -1.2
SHKBP1-213ENST00000597325 CFC1P0CG37 223 aa7.55□□□□□ -1.2
SHKBP1-213ENST00000597325 RPL13AP40429 203 aaKnown RBP7.55□□□□□ -1.2
SHKBP1-213ENST00000597325 PHF5AQ7RTV0 110 aaKnown RBP7.55□□□□□ -1.2
SHKBP1-213ENST00000597325 LINC00337Q8N6G1 96 aa7.55□□□□□ -1.2
SHKBP1-213ENST00000597325 TMEM126AQ9H061 195 aa7.55□□□□□ -1.2
SHKBP1-213ENST00000597325 TRBV10-3A0A0K0K1G6 114 aa7.54□□□□□ -1.2
SHKBP1-213ENST00000597325 LINC00167Q96N53 147 aa7.54□□□□□ -1.2
SHKBP1-213ENST00000597325 A0A1B0GWB2 263 aa7.53□□□□□ -1.2
SHKBP1-213ENST00000597325 RPL37AP8A6NKH3 93 aa7.53□□□□□ -1.2
SHKBP1-213ENST00000597325 K7ERJ3 54 aa7.53□□□□□ -1.2
SHKBP1-213ENST00000597325 Q1RN00 199 aa7.53□□□□□ -1.2
SHKBP1-213ENST00000597325 PRO1854Q9UHT4 67 aa7.53□□□□□ -1.2
SHKBP1-213ENST00000597325 H7C2G1 150 aa7.52□□□□□ -1.21
SHKBP1-213ENST00000597325 IGLV6-57P01721 117 aa7.52□□□□□ -1.21
SHKBP1-213ENST00000597325 MT1HL1P0DM35 61 aa7.52□□□□□ -1.21
SHKBP1-213ENST00000597325 IGLV1-50A0A075B6I6 118 aa7.51□□□□□ -1.21
SHKBP1-213ENST00000597325 TRAV23DV6A0A075B6W5 121 aa7.51□□□□□ -1.21
SHKBP1-213ENST00000597325 PRYO14603 147 aa7.51□□□□□ -1.21
SHKBP1-213ENST00000597325 SNHG12Q9BXW3 62 aa7.5□□□□□ -1.21
SHKBP1-213ENST00000597325 LPAP08519 4548 aa7.49□□□□□ -1.21
SHKBP1-213ENST00000597325 KCNQ1DNQ9H478 68 aa7.49□□□□□ -1.21
SHKBP1-213ENST00000597325 REG3GQ6UW15 175 aa7.48□□□□□ -1.21
SHKBP1-213ENST00000597325 SMIM11BQ8TCY0 68 aa7.48□□□□□ -1.21
SHKBP1-213ENST00000597325 DIRC1Q969H9 104 aa7.48□□□□□ -1.21
SHKBP1-213ENST00000597325 ZNF73O43830 326 aaPredicted RBP7.47□□□□□ -1.21
SHKBP1-213ENST00000597325 PSMB2P49721 201 aa7.47□□□□□ -1.21
SHKBP1-213ENST00000597325 COL5A1-AS1Q5SY13 56 aa7.47□□□□□ -1.21
SHKBP1-213ENST00000597325 ETDCA0A1B0GVM5 59 aa7.46□□□□□ -1.22
SHKBP1-213ENST00000597325 TSPAN13O95857 204 aa7.46□□□□□ -1.22
SHKBP1-213ENST00000597325 VAMP3Q15836 100 aa7.45□□□□□ -1.22
SHKBP1-213ENST00000597325 C6orf99Q4VX62 202 aa7.45□□□□□ -1.22
SHKBP1-213ENST00000597325 PSORS1C2Q9UIG4 136 aa7.45□□□□□ -1.22
SHKBP1-213ENST00000597325 BCE1O60756 84 aa7.44□□□□□ -1.22
SHKBP1-213ENST00000597325 RPL28P46779 137 aaKnown RBP7.44□□□□□ -1.22
SHKBP1-213ENST00000597325 C1orf137Q5JT78 98 aa7.44□□□□□ -1.22
SHKBP1-213ENST00000597325 FAM19A1Q7Z5A9 133 aa7.44□□□□□ -1.22
SHKBP1-213ENST00000597325 KRTAP11-1Q8IUC1 163 aa7.44□□□□□ -1.22
SHKBP1-213ENST00000597325 COX6CP09669 75 aa7.43□□□□□ -1.22
SHKBP1-213ENST00000597325 UBE2AP49459 152 aa7.43□□□□□ -1.22
SHKBP1-213ENST00000597325 RPL37AP61513 92 aaKnown RBP7.43□□□□□ -1.22
SHKBP1-213ENST00000597325 TRBV7-6A0A0J9YX20 115 aa7.42□□□□□ -1.22
SHKBP1-213ENST00000597325 TRIAP1O43715 76 aa7.42□□□□□ -1.22
SHKBP1-213ENST00000597325 COX7BP24311 80 aa7.42□□□□□ -1.22
SHKBP1-213ENST00000597325 SPRR1AP35321 89 aa7.42□□□□□ -1.22
SHKBP1-213ENST00000597325 LYRM7Q5U5X0 104 aa7.42□□□□□ -1.22
SHKBP1-213ENST00000597325 TAX1BP3O14907 124 aa7.41□□□□□ -1.22
SHKBP1-213ENST00000597325 C9orf118A6NHY6 69 aa7.4□□□□□ -1.22
SHKBP1-213ENST00000597325 H3BUT2 72 aa7.4□□□□□ -1.22
SHKBP1-213ENST00000597325 SCGB1C2P0DMR2 95 aa7.4□□□□□ -1.22
SHKBP1-213ENST00000597325 ELOF1P60002 83 aaKnown RBP7.4□□□□□ -1.22
SHKBP1-213ENST00000597325 Q6ZRX8 168 aa7.4□□□□□ -1.22
SHKBP1-213ENST00000597325 NAA38Q9BRA0 125 aaKnown RBP7.4□□□□□ -1.22
SHKBP1-213ENST00000597325 B5MCH6 92 aa7.39□□□□□ -1.23
SHKBP1-213ENST00000597325 KRTAP4-16G5E9R7 235 aaPredicted RBP7.39□□□□□ -1.23
SHKBP1-213ENST00000597325 H0YGX0 51 aa7.39□□□□□ -1.23
SHKBP1-213ENST00000597325 PRLHP81277 87 aa7.39□□□□□ -1.23
SHKBP1-213ENST00000597325 H0Y9J4 135 aa7.38□□□□□ -1.23
SHKBP1-213ENST00000597325 SLC25A20O43772 301 aa7.38□□□□□ -1.23
SHKBP1-213ENST00000597325 SNCGO76070 127 aa7.38□□□□□ -1.23
SHKBP1-213ENST00000597325 IGLV7-43P04211 117 aa7.38□□□□□ -1.23
SHKBP1-213ENST00000597325 DHRS4-AS1Q9P1J3 65 aa7.37□□□□□ -1.23
SHKBP1-213ENST00000597325 A0A1W2PPM0 123 aa7.36□□□□□ -1.23
SHKBP1-213ENST00000597325 FABP2P12104 132 aa7.36□□□□□ -1.23
SHKBP1-213ENST00000597325 HIGD2AQ9BW72 106 aa7.36□□□□□ -1.23
SHKBP1-213ENST00000597325 ZNF861PO60384 105 aa7.35□□□□□ -1.23
SHKBP1-213ENST00000597325 LCE2AQ5TA79 106 aaPredicted RBP7.35□□□□□ -1.23
SHKBP1-213ENST00000597325 LINC00575Q6W349 94 aa7.35□□□□□ -1.23
SHKBP1-213ENST00000597325 CLEC2BQ92478 149 aa7.35□□□□□ -1.23
SHKBP1-213ENST00000597325 hADV29S1A0JD25 119 aa7.34□□□□□ -1.23
SHKBP1-213ENST00000597325 KRTAP13-1Q8IUC0 172 aa7.34□□□□□ -1.23
SHKBP1-213ENST00000597325 ATXN8Q156A1 80 aa7.33□□□□□ -1.24
SHKBP1-213ENST00000597325 SMCR5Q8TEV8 140 aa7.33□□□□□ -1.24
SHKBP1-213ENST00000597325 Q9BRP9 147 aa7.33□□□□□ -1.24
SHKBP1-213ENST00000597325 FSIP2Q5CZC0 6907 aa7.32□□□□□ -1.24
SHKBP1-213ENST00000597325 TRBV20-1A0A075B6N2 111 aa7.32□□□□□ -1.24
SHKBP1-213ENST00000597325 A0A1B0GX51 115 aa7.32□□□□□ -1.24
SHKBP1-213ENST00000597325 DNAL4O96015 105 aa7.32□□□□□ -1.24
SHKBP1-213ENST00000597325 FAM218AQ96MZ4 157 aa7.32□□□□□ -1.24
SHKBP1-213ENST00000597325 LST1O00453 97 aa7.31□□□□□ -1.24
SHKBP1-213ENST00000597325 ZNF706Q9Y5V0 76 aaPredicted RBP7.31□□□□□ -1.24
SHKBP1-213ENST00000597325 SPCS1Q9Y6A9 102 aa7.31□□□□□ -1.24
SHKBP1-213ENST00000597325 TCL1BO95988 128 aa7.3□□□□□ -1.24
SHKBP1-213ENST00000597325 TRACP01848 142 aa7.3□□□□□ -1.24
SHKBP1-213ENST00000597325 SPINK6Q6UWN8 80 aa7.29□□□□□ -1.24
SHKBP1-213ENST00000597325 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.29□□□□□ -1.24
SHKBP1-213ENST00000597325 Q6ZQY7 126 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms