RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 EXPH5Q8NEV8 1989 aa2.66□□□□□ -1.98
SMAD4-216ENST00000593223 TRAV23DV6A0A075B6W5 121 aa2.65□□□□□ -1.99
SMAD4-216ENST00000593223 IGHV3-33P01772 117 aa2.65□□□□□ -1.99
SMAD4-216ENST00000593223 UBE2D3P61077 147 aa2.65□□□□□ -1.99
SMAD4-216ENST00000593223 UBE2D2P62837 147 aa2.65□□□□□ -1.99
SMAD4-216ENST00000593223 VMO1Q7Z5L0 202 aa2.65□□□□□ -1.99
SMAD4-216ENST00000593223 Q8TAT8 98 aa2.65□□□□□ -1.99
SMAD4-216ENST00000593223 LIMD2Q9BT23 127 aa2.65□□□□□ -1.99
SMAD4-216ENST00000593223 TTTY12Q9BZ98 90 aa2.65□□□□□ -1.99
SMAD4-216ENST00000593223 MANBALQ9NQG1 85 aa2.65□□□□□ -1.99
SMAD4-216ENST00000593223 TMSB15BA0A087X1C1 80 aa2.64□□□□□ -1.99
SMAD4-216ENST00000593223 TMEM30CPA0ZSE6 113 aa2.64□□□□□ -1.99
SMAD4-216ENST00000593223 UMAD1C9J7I0 102 aa2.64□□□□□ -1.99
SMAD4-216ENST00000593223 COX6CP09669 75 aa2.64□□□□□ -1.99
SMAD4-216ENST00000593223 P0C880 135 aa2.64□□□□□ -1.99
SMAD4-216ENST00000593223 PRB4P10163 310 aaPredicted RBP2.64□□□□□ -1.99
SMAD4-216ENST00000593223 C4orf3Q8WVX3 66 aa2.64□□□□□ -1.99
SMAD4-216ENST00000593223 Q9BRP9 147 aa2.64□□□□□ -1.99
SMAD4-216ENST00000593223 CYSTM1Q9H1C7 97 aa2.64□□□□□ -1.99
SMAD4-216ENST00000593223 APOBP04114 4563 aaKnown RBP2.64□□□□□ -1.99
SMAD4-216ENST00000593223 DNAH2Q9P225 4427 aa2.63□□□□□ -1.99
SMAD4-216ENST00000593223 TRBV7-3A0A075B6L6 115 aa2.63□□□□□ -1.99
SMAD4-216ENST00000593223 ELOBQ15370 118 aa2.63□□□□□ -1.99
SMAD4-216ENST00000593223 PSMG4Q5JS54 123 aa2.63□□□□□ -1.99
SMAD4-216ENST00000593223 DYNLRB1Q9NP97 96 aa2.63□□□□□ -1.99
SMAD4-216ENST00000593223 VPS13DQ5THJ4 4388 aa2.63□□□□□ -1.99
SMAD4-216ENST00000593223 TRAV12-3A0A0B4J271 114 aa2.62□□□□□ -1.99
SMAD4-216ENST00000593223 A0A0G2JND7 137 aa2.62□□□□□ -1.99
SMAD4-216ENST00000593223 TRBV10-1A0A0K0K1A3 114 aa2.62□□□□□ -1.99
SMAD4-216ENST00000593223 A0A1W2PNM2 257 aa2.62□□□□□ -1.99
SMAD4-216ENST00000593223 CLPSL1A2RUU4 121 aa2.62□□□□□ -1.99
SMAD4-216ENST00000593223 EFNA4P52798 201 aa2.62□□□□□ -1.99
SMAD4-216ENST00000593223 PDE6HQ13956 83 aa2.62□□□□□ -1.99
SMAD4-216ENST00000593223 CLECL1Q8IZS7 167 aa2.62□□□□□ -1.99
SMAD4-216ENST00000593223 Q8N6K4 173 aa2.62□□□□□ -1.99
SMAD4-216ENST00000593223 C9orf163Q8N9P6 203 aa2.62□□□□□ -1.99
SMAD4-216ENST00000593223 BPESC1Q9GZL8 116 aa2.62□□□□□ -1.99
SMAD4-216ENST00000593223 PKD1P98161 4303 aa2.62□□□□□ -1.99
SMAD4-216ENST00000593223 FSIP2Q5CZC0 6907 aa2.62□□□□□ -1.99
SMAD4-216ENST00000593223 SNRNP200O75643 2136 aaKnown RBP2.62□□□□□ -1.99
SMAD4-216ENST00000593223 DNAH17Q9UFH2 4485 aa2.62□□□□□ -1.99
SMAD4-216ENST00000593223 TRAV22A0A0B4J277 110 aa2.61□□□□□ -1.99
SMAD4-216ENST00000593223 C10orf128Q5T292 105 aa2.61□□□□□ -1.99
SMAD4-216ENST00000593223 DEFB106AQ8N104 65 aa2.61□□□□□ -1.99
SMAD4-216ENST00000593223 IFI27L1Q96BM0 104 aa2.61□□□□□ -1.99
SMAD4-216ENST00000593223 DMAC1Q96GE9 116 aa2.61□□□□□ -1.99
SMAD4-216ENST00000593223 R4GN34 69 aa2.61□□□□□ -1.99
SMAD4-216ENST00000593223 FLG2Q5D862 2391 aaPredicted RBP2.6□□□□□ -1.99
SMAD4-216ENST00000593223 TRBV25-1A0A075B6N4 114 aa2.6□□□□□ -1.99
SMAD4-216ENST00000593223 C2orf70A6NJV1 201 aa2.6□□□□□ -1.99
SMAD4-216ENST00000593223 TMEM14DPA8MWL7 114 aa2.6□□□□□ -1.99
SMAD4-216ENST00000593223 SFTA3P0C7M3 94 aa2.6□□□□□ -1.99
SMAD4-216ENST00000593223 EDDM3BP56851 147 aa2.6□□□□□ -1.99
SMAD4-216ENST00000593223 CNBPP62633 177 aaKnown RBP2.6□□□□□ -1.99
SMAD4-216ENST00000593223 C1orf137Q5JT78 98 aa2.6□□□□□ -1.99
SMAD4-216ENST00000593223 XAF1Q6GPH4 301 aa2.6□□□□□ -1.99
SMAD4-216ENST00000593223 Q6ZTI0 123 aa2.6□□□□□ -1.99
SMAD4-216ENST00000593223 TVP23CQ96ET8 276 aa2.6□□□□□ -1.99
SMAD4-216ENST00000593223 PRO2289Q9P1D8 64 aa2.6□□□□□ -1.99
SMAD4-216ENST00000593223 SDHAF1A6NFY7 115 aa2.59□□□□□ -1.99
SMAD4-216ENST00000593223 CHKB-CPT1BH3BT56 60 aa2.59□□□□□ -1.99
SMAD4-216ENST00000593223 LY6G6CO95867 125 aa2.59□□□□□ -1.99
SMAD4-216ENST00000593223 HMGN2P05204 90 aaKnown RBP2.59□□□□□ -1.99
SMAD4-216ENST00000593223 UBE2D1P51668 147 aa2.59□□□□□ -1.99
SMAD4-216ENST00000593223 ZNF56Q15929 161 aa2.59□□□□□ -1.99
SMAD4-216ENST00000593223 Q5VV11 94 aa2.59□□□□□ -1.99
SMAD4-216ENST00000593223 LOC285095A0A1B0GVY8 99 aa2.58□□□□□ -2
SMAD4-216ENST00000593223 ELOF1P60002 83 aaKnown RBP2.58□□□□□ -2
SMAD4-216ENST00000593223 FAM223AQ8IWN6 122 aa2.58□□□□□ -2
SMAD4-216ENST00000593223 NINQ8N4C6 2090 aa2.57□□□□□ -2
SMAD4-216ENST00000593223 MED12LQ86YW9 2145 aa2.57□□□□□ -2
SMAD4-216ENST00000593223 A0A0J9YY99 117 aa2.57□□□□□ -2
SMAD4-216ENST00000593223 TEX49A0A1B0GTD5 131 aa2.57□□□□□ -2
SMAD4-216ENST00000593223 CDC42SE2Q9NRR3 84 aa2.57□□□□□ -2
SMAD4-216ENST00000593223 ORMDL1Q9P0S3 153 aa2.57□□□□□ -2
SMAD4-216ENST00000593223 CRCT1Q9UGL9 99 aa2.57□□□□□ -2
SMAD4-216ENST00000593223 LOC101927531A0A1B0GV80 90 aa2.56□□□□□ -2
SMAD4-216ENST00000593223 NUPR2A6NF83 97 aa2.56□□□□□ -2
SMAD4-216ENST00000593223 HIGD1CA8MV81 97 aa2.56□□□□□ -2
SMAD4-216ENST00000593223 SPINT3P49223 89 aa2.56□□□□□ -2
SMAD4-216ENST00000593223 KRTAP13-2Q52LG2 175 aa2.56□□□□□ -2
SMAD4-216ENST00000593223 CSAG1Q6PB30 78 aa2.56□□□□□ -2
SMAD4-216ENST00000593223 MRPL36Q9P0J6 103 aaKnown RBP2.56□□□□□ -2
SMAD4-216ENST00000593223 FAT1Q14517 4588 aa2.56□□□□□ -2
SMAD4-216ENST00000593223 MYMXA0A1B0GTQ4 84 aa2.55□□□□□ -2
SMAD4-216ENST00000593223 A0A1B0GWA3 101 aa2.55□□□□□ -2
SMAD4-216ENST00000593223 ZNF815PA8K554 130 aa2.55□□□□□ -2
SMAD4-216ENST00000593223 TFF1P04155 84 aa2.55□□□□□ -2
SMAD4-216ENST00000593223 COX8AP10176 69 aa2.55□□□□□ -2
SMAD4-216ENST00000593223 PRR9Q5T870 116 aa2.55□□□□□ -2
SMAD4-216ENST00000593223 C6orf201Q7Z4U5 140 aa2.55□□□□□ -2
SMAD4-216ENST00000593223 Q86TA4 180 aa2.55□□□□□ -2
SMAD4-216ENST00000593223 DNAH6Q9C0G6 4158 aa2.55□□□□□ -2
SMAD4-216ENST00000593223 PROK2Q9HC23 129 aa2.55□□□□□ -2
SMAD4-216ENST00000593223 TMEM14BQ9NUH8 114 aa2.55□□□□□ -2
SMAD4-216ENST00000593223 LENEPQ9Y5L5 61 aa2.55□□□□□ -2
SMAD4-216ENST00000593223 V9GYH0 126 aa2.55□□□□□ -2
SMAD4-216ENST00000593223 LRP1BQ9NZR2 4599 aa2.54□□□□□ -2
SMAD4-216ENST00000593223 IQCF6A8MYZ5 107 aa2.54□□□□□ -2
SMAD4-216ENST00000593223 LYNX1G3V0Z9 82 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms