RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 SNHG12Q9BXW3 62 aa5.95□□□□□ -1.46
TPM4-215ENST00000592138 SPANXB1Q9NS25 103 aaPredicted RBP5.95□□□□□ -1.46
TPM4-215ENST00000592138 IGKV2-28A0A075B6P5 120 aa5.94□□□□□ -1.46
TPM4-215ENST00000592138 RPL37AP8A6NKH3 93 aa5.94□□□□□ -1.46
TPM4-215ENST00000592138 M0R143 59 aa5.94□□□□□ -1.46
TPM4-215ENST00000592138 IGKV2D-28P01615 120 aa5.94□□□□□ -1.46
TPM4-215ENST00000592138 IFITM1P13164 125 aa5.94□□□□□ -1.46
TPM4-215ENST00000592138 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
TPM4-215ENST00000592138 SOSTDC1Q6X4U4 206 aa5.94□□□□□ -1.46
TPM4-215ENST00000592138 LINC00308Q8TCZ7 52 aa5.94□□□□□ -1.46
TPM4-215ENST00000592138 KRTAP4-12Q9BQ66 201 aa5.94□□□□□ -1.46
TPM4-215ENST00000592138 ZNF861PO60384 105 aa5.93□□□□□ -1.46
TPM4-215ENST00000592138 DIRC1Q969H9 104 aa5.93□□□□□ -1.46
TPM4-215ENST00000592138 TMEM126AQ9H061 195 aa5.93□□□□□ -1.46
TPM4-215ENST00000592138 KCNQ1DNQ9H478 68 aa5.93□□□□□ -1.46
TPM4-215ENST00000592138 PRYO14603 147 aa5.92□□□□□ -1.46
TPM4-215ENST00000592138 NCR3O14931 201 aa5.92□□□□□ -1.46
TPM4-215ENST00000592138 DLEU1O43261 78 aa5.92□□□□□ -1.46
TPM4-215ENST00000592138 EIF4EBP3O60516 100 aaPredicted RBP5.92□□□□□ -1.46
TPM4-215ENST00000592138 COX8AP10176 69 aa5.92□□□□□ -1.46
TPM4-215ENST00000592138 RPL28P46779 137 aaKnown RBP5.92□□□□□ -1.46
TPM4-215ENST00000592138 REG3GQ6UW15 175 aa5.92□□□□□ -1.46
TPM4-215ENST00000592138 UQCR10Q9UDW1 63 aa5.92□□□□□ -1.46
TPM4-215ENST00000592138 H0Y9J4 135 aa5.91□□□□□ -1.46
TPM4-215ENST00000592138 SPRR1AP35321 89 aa5.91□□□□□ -1.46
TPM4-215ENST00000592138 NPC2P61916 151 aa5.91□□□□□ -1.46
TPM4-215ENST00000592138 SPATA45Q537H7 98 aa5.91□□□□□ -1.46
TPM4-215ENST00000592138 KRTAP13-1Q8IUC0 172 aa5.91□□□□□ -1.46
TPM4-215ENST00000592138 PAM16Q9Y3D7 125 aa5.91□□□□□ -1.46
TPM4-215ENST00000592138 RNF213Q63HN8 5207 aa5.91□□□□□ -1.46
TPM4-215ENST00000592138 A0A1B0GV90 55 aa5.9□□□□□ -1.46
TPM4-215ENST00000592138 IGLV6-57P01721 117 aa5.9□□□□□ -1.46
TPM4-215ENST00000592138 LINC00337Q8N6G1 96 aa5.9□□□□□ -1.46
TPM4-215ENST00000592138 TRBV10-3A0A0K0K1G6 114 aa5.89□□□□□ -1.47
TPM4-215ENST00000592138 UBE2AP49459 152 aa5.89□□□□□ -1.47
TPM4-215ENST00000592138 S100A7L2Q5SY68 101 aa5.89□□□□□ -1.47
TPM4-215ENST00000592138 LINC01600Q96MT4 127 aa5.89□□□□□ -1.47
TPM4-215ENST00000592138 TNXBP22105 4242 aa5.88□□□□□ -1.47
TPM4-215ENST00000592138 KRTAP4-16G5E9R7 235 aaPredicted RBP5.88□□□□□ -1.47
TPM4-215ENST00000592138 FAM19A1Q7Z5A9 133 aa5.88□□□□□ -1.47
TPM4-215ENST00000592138 KRTAP9-9Q9BYP9 154 aa5.88□□□□□ -1.47
TPM4-215ENST00000592138 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
TPM4-215ENST00000592138 LRP2P98164 4655 aa5.87□□□□□ -1.47
TPM4-215ENST00000592138 TRAV23DV6A0A075B6W5 121 aa5.87□□□□□ -1.47
TPM4-215ENST00000592138 MUSTN1Q8IVN3 82 aa5.87□□□□□ -1.47
TPM4-215ENST00000592138 HIGD1BQ9P298 99 aa5.87□□□□□ -1.47
TPM4-215ENST00000592138 SLC25A34Q6PIV7 304 aa5.86□□□□□ -1.47
TPM4-215ENST00000592138 ETDCA0A1B0GVM5 59 aa5.85□□□□□ -1.47
TPM4-215ENST00000592138 KRTAP1-4P0C5Y4 121 aa5.85□□□□□ -1.47
TPM4-215ENST00000592138 MT1HL1P0DM35 61 aa5.85□□□□□ -1.47
TPM4-215ENST00000592138 PRLHP81277 87 aa5.85□□□□□ -1.47
TPM4-215ENST00000592138 COL5A1-AS1Q5SY13 56 aa5.85□□□□□ -1.47
TPM4-215ENST00000592138 TRAV13-2A0A0B4J235 113 aa5.84□□□□□ -1.47
TPM4-215ENST00000592138 ZNF73O43830 326 aaPredicted RBP5.84□□□□□ -1.47
TPM4-215ENST00000592138 OR13C6PQ8NH95 151 aa5.84□□□□□ -1.47
TPM4-215ENST00000592138 B5MCH6 92 aa5.83□□□□□ -1.48
TPM4-215ENST00000592138 KRTAP10-8P60410 259 aa5.83□□□□□ -1.48
TPM4-215ENST00000592138 Q6ZRX8 168 aa5.83□□□□□ -1.48
TPM4-215ENST00000592138 HIST1H4GQ99525 98 aa5.83□□□□□ -1.48
TPM4-215ENST00000592138 RPL13AP40429 203 aaKnown RBP5.82□□□□□ -1.48
TPM4-215ENST00000592138 HINT1P49773 126 aaPredicted RBP5.82□□□□□ -1.48
TPM4-215ENST00000592138 TAL2Q16559 108 aa5.82□□□□□ -1.48
TPM4-215ENST00000592138 C2orf91Q6ZV80 131 aa5.82□□□□□ -1.48
TPM4-215ENST00000592138 KRTAP4-8A0A0G2JLE6 195 aa5.81□□□□□ -1.48
TPM4-215ENST00000592138 TRBV7-6A0A0J9YX20 115 aa5.81□□□□□ -1.48
TPM4-215ENST00000592138 A4D1N5 150 aa5.81□□□□□ -1.48
TPM4-215ENST00000592138 FAM229BQ4G0N7 80 aa5.81□□□□□ -1.48
TPM4-215ENST00000592138 SMCR5Q8TEV8 140 aa5.81□□□□□ -1.48
TPM4-215ENST00000592138 HIGD2AQ9BW72 106 aa5.81□□□□□ -1.48
TPM4-215ENST00000592138 ZNF706Q9Y5V0 76 aaPredicted RBP5.81□□□□□ -1.48
TPM4-215ENST00000592138 A6NDN8 102 aa5.8□□□□□ -1.48
TPM4-215ENST00000592138 ELOF1P60002 83 aaKnown RBP5.79□□□□□ -1.48
TPM4-215ENST00000592138 C6orf99Q4VX62 202 aa5.79□□□□□ -1.48
TPM4-215ENST00000592138 BVES-AS1Q5T3Y7 98 aa5.79□□□□□ -1.48
TPM4-215ENST00000592138 Q9BRP9 147 aa5.79□□□□□ -1.48
TPM4-215ENST00000592138 A0A1B0GWB2 263 aa5.78□□□□□ -1.48
TPM4-215ENST00000592138 CRYGAP11844 174 aa5.78□□□□□ -1.48
TPM4-215ENST00000592138 CEND1Q8N111 149 aa5.78□□□□□ -1.48
TPM4-215ENST00000592138 PRR26Q8N8Z3 221 aa5.78□□□□□ -1.48
TPM4-215ENST00000592138 SPRR4Q96PI1 79 aa5.78□□□□□ -1.48
TPM4-215ENST00000592138 DHRS4-AS1Q9P1J3 65 aa5.78□□□□□ -1.48
TPM4-215ENST00000592138 A0A0B4J2C4 111 aa5.77□□□□□ -1.49
TPM4-215ENST00000592138 COX7BP24311 80 aa5.77□□□□□ -1.49
TPM4-215ENST00000592138 LINC00483Q53H64 154 aa5.77□□□□□ -1.49
TPM4-215ENST00000592138 KRTAP19-1Q8IUB9 90 aa5.77□□□□□ -1.49
TPM4-215ENST00000592138 A0A087X002 238 aa5.76□□□□□ -1.49
TPM4-215ENST00000592138 HSD52Q0P140 79 aa5.76□□□□□ -1.49
TPM4-215ENST00000592138 SMIM11BQ8TCY0 68 aa5.76□□□□□ -1.49
TPM4-215ENST00000592138 TAX1BP3O14907 124 aa5.75□□□□□ -1.49
TPM4-215ENST00000592138 ERC2-IT1O76042 136 aa5.75□□□□□ -1.49
TPM4-215ENST00000592138 CFC1BP0CG36 223 aa5.75□□□□□ -1.49
TPM4-215ENST00000592138 CFC1P0CG37 223 aa5.75□□□□□ -1.49
TPM4-215ENST00000592138 VAMP3Q15836 100 aa5.74□□□□□ -1.49
TPM4-215ENST00000592138 RAB37Q96AX2 223 aa5.74□□□□□ -1.49
TPM4-215ENST00000592138 NHP2Q9NX24 153 aaKnown RBP5.74□□□□□ -1.49
TPM4-215ENST00000592138 ANAPC11Q9NYG5 84 aa5.74□□□□□ -1.49
TPM4-215ENST00000592138 FXYD2P54710 66 aa5.73□□□□□ -1.49
TPM4-215ENST00000592138 UBE2V1Q13404 147 aa5.73□□□□□ -1.49
TPM4-215ENST00000592138 BATFQ16520 125 aa5.73□□□□□ -1.49
TPM4-215ENST00000592138 KRTAP13-2Q52LG2 175 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms