RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 SMIM6P0DI80 62 aa10.85□□□□□ -0.67
VAT1-208ENST00000590924 DDTP30046 118 aa10.85□□□□□ -0.67
VAT1-208ENST00000590924 S100A7L2Q5SY68 101 aa10.85□□□□□ -0.67
VAT1-208ENST00000590924 TMEM126AQ9H061 195 aa10.85□□□□□ -0.67
VAT1-208ENST00000590924 HIST1H4GQ99525 98 aa10.84□□□□□ -0.67
VAT1-208ENST00000590924 RNF213Q63HN8 5207 aa10.82□□□□□ -0.68
VAT1-208ENST00000590924 H0Y9J4 135 aa10.82□□□□□ -0.68
VAT1-208ENST00000590924 ZNF861PO60384 105 aa10.82□□□□□ -0.68
VAT1-208ENST00000590924 C2orf91Q6ZV80 131 aa10.82□□□□□ -0.68
VAT1-208ENST00000590924 SPRR1AP35321 89 aa10.81□□□□□ -0.68
VAT1-208ENST00000590924 RPL28P46779 137 aaKnown RBP10.81□□□□□ -0.68
VAT1-208ENST00000590924 TAL2Q16559 108 aa10.81□□□□□ -0.68
VAT1-208ENST00000590924 PRR26Q8N8Z3 221 aa10.81□□□□□ -0.68
VAT1-208ENST00000590924 LINC00337Q8N6G1 96 aa10.8□□□□□ -0.68
VAT1-208ENST00000590924 UQCR10Q9UDW1 63 aa10.8□□□□□ -0.68
VAT1-208ENST00000590924 OR13C6PQ8NH95 151 aa10.79□□□□□ -0.68
VAT1-208ENST00000590924 TRAV13-2A0A0B4J235 113 aa10.78□□□□□ -0.68
VAT1-208ENST00000590924 KRTAP13-1Q8IUC0 172 aa10.78□□□□□ -0.68
VAT1-208ENST00000590924 TRAV23DV6A0A075B6W5 121 aa10.77□□□□□ -0.69
VAT1-208ENST00000590924 A4D1N5 150 aa10.77□□□□□ -0.69
VAT1-208ENST00000590924 KRTAP4-16G5E9R7 235 aaPredicted RBP10.77□□□□□ -0.69
VAT1-208ENST00000590924 UBE2AP49459 152 aa10.77□□□□□ -0.69
VAT1-208ENST00000590924 FAM19A1Q7Z5A9 133 aa10.77□□□□□ -0.69
VAT1-208ENST00000590924 KRTAP1-4P0C5Y4 121 aa10.76□□□□□ -0.69
VAT1-208ENST00000590924 ETDCA0A1B0GVM5 59 aa10.75□□□□□ -0.69
VAT1-208ENST00000590924 LPAP08519 4548 aa10.75□□□□□ -0.69
VAT1-208ENST00000590924 A6NDN8 102 aa10.74□□□□□ -0.69
VAT1-208ENST00000590924 ZNF73O43830 326 aaPredicted RBP10.73□□□□□ -0.69
VAT1-208ENST00000590924 CEND1Q8N111 149 aa10.73□□□□□ -0.69
VAT1-208ENST00000590924 HINT1P49773 126 aaPredicted RBP10.72□□□□□ -0.69
VAT1-208ENST00000590924 B5MCH6 92 aa10.71□□□□□ -0.69
VAT1-208ENST00000590924 PRLHP81277 87 aa10.71□□□□□ -0.69
VAT1-208ENST00000590924 HSD52Q0P140 79 aa10.71□□□□□ -0.69
VAT1-208ENST00000590924 TMEM238LA0A1B0GVL6 79 aa10.7□□□□□ -0.7
VAT1-208ENST00000590924 A6NJY4 79 aa10.7□□□□□ -0.7
VAT1-208ENST00000590924 RPL13AP40429 203 aaKnown RBP10.7□□□□□ -0.7
VAT1-208ENST00000590924 TRBV7-6A0A0J9YX20 115 aa10.69□□□□□ -0.7
VAT1-208ENST00000590924 C12orf57Q99622 126 aa10.69□□□□□ -0.7
VAT1-208ENST00000590924 Q6ZRX8 168 aa10.68□□□□□ -0.7
VAT1-208ENST00000590924 PRO1933Q9H354 126 aa10.68□□□□□ -0.7
VAT1-208ENST00000590924 CFC1BP0CG36 223 aa10.67□□□□□ -0.7
VAT1-208ENST00000590924 CFC1P0CG37 223 aa10.67□□□□□ -0.7
VAT1-208ENST00000590924 A0A0B4J2C4 111 aa10.66□□□□□ -0.7
VAT1-208ENST00000590924 C6orf99Q4VX62 202 aa10.65□□□□□ -0.7
VAT1-208ENST00000590924 SMIM11BQ8TCY0 68 aa10.65□□□□□ -0.7
VAT1-208ENST00000590924 HIGD2AQ9BW72 106 aa10.65□□□□□ -0.7
VAT1-208ENST00000590924 TSTD3H0UI37 97 aa10.64□□□□□ -0.71
VAT1-208ENST00000590924 RAB37Q96AX2 223 aa10.64□□□□□ -0.71
VAT1-208ENST00000590924 COX7BP24311 80 aa10.63□□□□□ -0.71
VAT1-208ENST00000590924 FXYD2P54710 66 aa10.63□□□□□ -0.71
VAT1-208ENST00000590924 ELOF1P60002 83 aaKnown RBP10.63□□□□□ -0.71
VAT1-208ENST00000590924 SMCR5Q8TEV8 140 aa10.63□□□□□ -0.71
VAT1-208ENST00000590924 A0A1B0GWB2 263 aa10.62□□□□□ -0.71
VAT1-208ENST00000590924 Q9BRP9 147 aa10.62□□□□□ -0.71
VAT1-208ENST00000590924 DHRS4-AS1Q9P1J3 65 aa10.62□□□□□ -0.71
VAT1-208ENST00000590924 ZNF706Q9Y5V0 76 aaPredicted RBP10.62□□□□□ -0.71
VAT1-208ENST00000590924 VAMP3Q15836 100 aa10.61□□□□□ -0.71
VAT1-208ENST00000590924 PRO1854Q9UHT4 67 aa10.61□□□□□ -0.71
VAT1-208ENST00000590924 PRR4Q16378 134 aa10.58□□□□□ -0.72
VAT1-208ENST00000590924 FAM229BQ4G0N7 80 aa10.58□□□□□ -0.72
VAT1-208ENST00000590924 SPRR4Q96PI1 79 aa10.58□□□□□ -0.72
VAT1-208ENST00000590924 BVES-AS1Q5T3Y7 98 aa10.57□□□□□ -0.72
VAT1-208ENST00000590924 ERC2-IT1O76042 136 aa10.56□□□□□ -0.72
VAT1-208ENST00000590924 CTAG1AP78358 180 aa10.56□□□□□ -0.72
VAT1-208ENST00000590924 NHP2Q9NX24 153 aaKnown RBP10.56□□□□□ -0.72
VAT1-208ENST00000590924 A0A087X002 238 aa10.55□□□□□ -0.72
VAT1-208ENST00000590924 M0R143 59 aa10.55□□□□□ -0.72
VAT1-208ENST00000590924 CRYGAP11844 174 aa10.54□□□□□ -0.72
VAT1-208ENST00000590924 H7C2G1 150 aa10.53□□□□□ -0.72
VAT1-208ENST00000590924 LINC00483Q53H64 154 aa10.52□□□□□ -0.73
VAT1-208ENST00000590924 H0YGX0 51 aa10.51□□□□□ -0.73
VAT1-208ENST00000590924 SLC25A20O43772 301 aa10.51□□□□□ -0.73
VAT1-208ENST00000590924 LINC00575Q6W349 94 aa10.51□□□□□ -0.73
VAT1-208ENST00000590924 TYMSOSQ8TAI1 123 aa10.51□□□□□ -0.73
VAT1-208ENST00000590924 TSPAN13O95857 204 aa10.5□□□□□ -0.73
VAT1-208ENST00000590924 Q1RN00 199 aa10.5□□□□□ -0.73
VAT1-208ENST00000590924 ANAPC11Q9NYG5 84 aa10.5□□□□□ -0.73
VAT1-208ENST00000590924 GAGE2AQ6NT46 116 aa10.49□□□□□ -0.73
VAT1-208ENST00000590924 SPRR1BP22528 89 aa10.48□□□□□ -0.73
VAT1-208ENST00000590924 hADV29S1A0JD25 119 aa10.47□□□□□ -0.73
VAT1-208ENST00000590924 K7ERJ3 54 aa10.47□□□□□ -0.73
VAT1-208ENST00000590924 ST20-AS1Q8NBB2 130 aa10.47□□□□□ -0.73
VAT1-208ENST00000590924 SNCGO76070 127 aa10.46□□□□□ -0.73
VAT1-208ENST00000590924 KRTAP13-2Q52LG2 175 aa10.45□□□□□ -0.74
VAT1-208ENST00000590924 IGLV5-48A0A075B6I7 105 aa10.44□□□□□ -0.74
VAT1-208ENST00000590924 TEX49A0A1B0GTD5 131 aa10.44□□□□□ -0.74
VAT1-208ENST00000590924 A0A1B0GX51 115 aa10.43□□□□□ -0.74
VAT1-208ENST00000590924 TRIAP1O43715 76 aa10.43□□□□□ -0.74
VAT1-208ENST00000590924 COX6CP09669 75 aa10.43□□□□□ -0.74
VAT1-208ENST00000590924 MUC2Q02817 5179 aa10.42□□□□□ -0.74
VAT1-208ENST00000590924 PSMB2P49721 201 aa10.42□□□□□ -0.74
VAT1-208ENST00000590924 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.42□□□□□ -0.74
VAT1-208ENST00000590924 LINC01547P58512 204 aaPredicted RBP10.4□□□□□ -0.74
VAT1-208ENST00000590924 SSBP3-AS1Q7Z2R9 100 aa10.4□□□□□ -0.74
VAT1-208ENST00000590924 C3orf22Q8N5N4 141 aa10.39□□□□□ -0.75
VAT1-208ENST00000590924 LINC00304Q8N9R0 145 aa10.39□□□□□ -0.75
VAT1-208ENST00000590924 DEFB105AQ8NG35 78 aa10.39□□□□□ -0.75
VAT1-208ENST00000590924 LAMTOR3Q9UHA4 124 aa10.39□□□□□ -0.75
VAT1-208ENST00000590924 A0A0U1RQV1 116 aa10.38□□□□□ -0.75
VAT1-208ENST00000590924 OCIAD2Q56VL3 154 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms