RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 LINC00308Q8TCZ7 52 aa5.02□□□□□ -1.61
SMAD4-209ENST00000589941 Q9UF83 564 aa5.02□□□□□ -1.61
SMAD4-209ENST00000589941 A0A096LPF7 62 aa5.01□□□□□ -1.61
SMAD4-209ENST00000589941 H7C2G1 150 aa5.01□□□□□ -1.61
SMAD4-209ENST00000589941 INSP01308 110 aa5.01□□□□□ -1.61
SMAD4-209ENST00000589941 HERV-K104P63124 156 aa5.01□□□□□ -1.61
SMAD4-209ENST00000589941 CIRBP-AS1Q8TBR5 109 aa5.01□□□□□ -1.61
SMAD4-209ENST00000589941 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5□□□□□ -1.61
SMAD4-209ENST00000589941 IGKV2-29A2NJV5 120 aaPredicted RBP5□□□□□ -1.61
SMAD4-209ENST00000589941 RPL37AP61513 92 aaKnown RBP5□□□□□ -1.61
SMAD4-209ENST00000589941 CIRBPQ14011 172 aaKnown RBP5□□□□□ -1.61
SMAD4-209ENST00000589941 SOSTDC1Q6X4U4 206 aa5□□□□□ -1.61
SMAD4-209ENST00000589941 NOTCH2NLQ7Z3S9 236 aa5□□□□□ -1.61
SMAD4-209ENST00000589941 DAND5Q8N907 189 aa5□□□□□ -1.61
SMAD4-209ENST00000589941 CLEC2BQ92478 149 aa5□□□□□ -1.61
SMAD4-209ENST00000589941 C22orf24Q9Y442 160 aa5□□□□□ -1.61
SMAD4-209ENST00000589941 IGHV3-73A0A0B4J1V6 119 aa4.99□□□□□ -1.61
SMAD4-209ENST00000589941 F8WDY8 70 aa4.99□□□□□ -1.61
SMAD4-209ENST00000589941 COX6A2Q02221 97 aa4.99□□□□□ -1.61
SMAD4-209ENST00000589941 DAZ2Q13117 558 aaKnown RBP4.99□□□□□ -1.61
SMAD4-209ENST00000589941 RNASE13Q5GAN3 156 aaKnown RBP4.99□□□□□ -1.61
SMAD4-209ENST00000589941 DAZ4Q86SG3 579 aaKnown RBP4.99□□□□□ -1.61
SMAD4-209ENST00000589941 DAZ3Q9NR90 486 aaKnown RBP4.99□□□□□ -1.61
SMAD4-209ENST00000589941 K7EQD1 137 aa4.98□□□□□ -1.61
SMAD4-209ENST00000589941 RPL28P46779 137 aaKnown RBP4.98□□□□□ -1.61
SMAD4-209ENST00000589941 NTM-AS1Q6ZSK4 140 aa4.98□□□□□ -1.61
SMAD4-209ENST00000589941 WFDC10BQ8IUB3 73 aa4.98□□□□□ -1.61
SMAD4-209ENST00000589941 CDC42SE2Q9NRR3 84 aa4.98□□□□□ -1.61
SMAD4-209ENST00000589941 CCDC179H3BU77 68 aa4.97□□□□□ -1.61
SMAD4-209ENST00000589941 LINC00694P0DN24 101 aa4.97□□□□□ -1.61
SMAD4-209ENST00000589941 CXCL5P42830 114 aa4.97□□□□□ -1.61
SMAD4-209ENST00000589941 C14orf177Q52M58 125 aa4.97□□□□□ -1.61
SMAD4-209ENST00000589941 C5orf38Q86SI9 138 aa4.97□□□□□ -1.61
SMAD4-209ENST00000589941 LINC00643Q86TS7 51 aa4.97□□□□□ -1.61
SMAD4-209ENST00000589941 OBSCN-AS1Q96MR7 158 aa4.97□□□□□ -1.61
SMAD4-209ENST00000589941 LINC01587Q99440 93 aa4.97□□□□□ -1.61
SMAD4-209ENST00000589941 NOP10Q9NPE3 64 aaKnown RBP4.97□□□□□ -1.61
SMAD4-209ENST00000589941 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.96□□□□□ -1.62
SMAD4-209ENST00000589941 LINC00612Q8N6U2 182 aa4.96□□□□□ -1.62
SMAD4-209ENST00000589941 TRAV13-2A0A0B4J235 113 aa4.95□□□□□ -1.62
SMAD4-209ENST00000589941 IGHV3-38A0A0C4DH36 116 aa4.95□□□□□ -1.62
SMAD4-209ENST00000589941 H3BNG1 76 aa4.95□□□□□ -1.62
SMAD4-209ENST00000589941 LECT2O14960 151 aa4.95□□□□□ -1.62
SMAD4-209ENST00000589941 PSCAO43653 123 aa4.95□□□□□ -1.62
SMAD4-209ENST00000589941 HIST1H4AP62805 103 aaKnown RBP4.95□□□□□ -1.62
SMAD4-209ENST00000589941 SS18L2Q9UHA2 77 aa4.95□□□□□ -1.62
SMAD4-209ENST00000589941 A0A087X002 238 aa4.94□□□□□ -1.62
SMAD4-209ENST00000589941 IGLV9-49A0A0B4J1Y8 123 aa4.94□□□□□ -1.62
SMAD4-209ENST00000589941 TRBV6-4A0A1B0GX49 114 aa4.94□□□□□ -1.62
SMAD4-209ENST00000589941 VPREB1P12018 145 aa4.94□□□□□ -1.62
SMAD4-209ENST00000589941 NPC2P61916 151 aa4.94□□□□□ -1.62
SMAD4-209ENST00000589941 KRTAP7-1Q8IUC3 87 aa4.94□□□□□ -1.62
SMAD4-209ENST00000589941 LINC01561Q8N1V8 128 aa4.94□□□□□ -1.62
SMAD4-209ENST00000589941 SMCR5Q8TEV8 140 aa4.94□□□□□ -1.62
SMAD4-209ENST00000589941 FAM218AQ96MZ4 157 aa4.94□□□□□ -1.62
SMAD4-209ENST00000589941 TMEM243Q9BU79 118 aa4.94□□□□□ -1.62
SMAD4-209ENST00000589941 TMEM126AQ9H061 195 aa4.94□□□□□ -1.62
SMAD4-209ENST00000589941 IGKV2-28A0A075B6P5 120 aa4.93□□□□□ -1.62
SMAD4-209ENST00000589941 IGKV2D-28P01615 120 aa4.93□□□□□ -1.62
SMAD4-209ENST00000589941 BAALC-AS2P0C853 105 aa4.93□□□□□ -1.62
SMAD4-209ENST00000589941 HTN1P15515 57 aa4.93□□□□□ -1.62
SMAD4-209ENST00000589941 Q6ZRU5 148 aa4.93□□□□□ -1.62
SMAD4-209ENST00000589941 C16orf74Q96GX8 76 aa4.93□□□□□ -1.62
SMAD4-209ENST00000589941 Q9HAA7 133 aa4.93□□□□□ -1.62
SMAD4-209ENST00000589941 TRGV1A0A0A0MS02 117 aa4.92□□□□□ -1.62
SMAD4-209ENST00000589941 IGHV3OR16-9A0A0B4J2B5 98 aa4.92□□□□□ -1.62
SMAD4-209ENST00000589941 A0A0U1RQV1 116 aa4.92□□□□□ -1.62
SMAD4-209ENST00000589941 IBA57-AS1B1ANH7 110 aa4.92□□□□□ -1.62
SMAD4-209ENST00000589941 H0YGX0 51 aa4.92□□□□□ -1.62
SMAD4-209ENST00000589941 MEIG1Q5JSS6 88 aa4.92□□□□□ -1.62
SMAD4-209ENST00000589941 LYPD5Q6UWN5 251 aa4.92□□□□□ -1.62
SMAD4-209ENST00000589941 Q6ZTI0 123 aa4.92□□□□□ -1.62
SMAD4-209ENST00000589941 LINC00337Q8N6G1 96 aa4.92□□□□□ -1.62
SMAD4-209ENST00000589941 COX7B2Q8TF08 81 aa4.92□□□□□ -1.62
SMAD4-209ENST00000589941 LINC00167Q96N53 147 aa4.92□□□□□ -1.62
SMAD4-209ENST00000589941 A0A087WZ39 114 aa4.91□□□□□ -1.62
SMAD4-209ENST00000589941 TRAV13-1A0A0B4J241 112 aa4.91□□□□□ -1.62
SMAD4-209ENST00000589941 A0A1B0GX51 115 aa4.91□□□□□ -1.62
SMAD4-209ENST00000589941 CRPP02741 224 aa4.91□□□□□ -1.62
SMAD4-209ENST00000589941 LCE1FQ5T754 118 aa4.91□□□□□ -1.62
SMAD4-209ENST00000589941 PRAC1Q96KF2 57 aa4.91□□□□□ -1.62
SMAD4-209ENST00000589941 FAM236AA0A1B0GUQ0 79 aa4.9□□□□□ -1.63
SMAD4-209ENST00000589941 FAM236BA0A1B0GV22 79 aa4.9□□□□□ -1.63
SMAD4-209ENST00000589941 UQCRQO14949 82 aa4.9□□□□□ -1.63
SMAD4-209ENST00000589941 Q6JHZ5 121 aa4.9□□□□□ -1.63
SMAD4-209ENST00000589941 MIR7-3HGQ8N6C7 128 aa4.9□□□□□ -1.63
SMAD4-209ENST00000589941 LINC00526Q96FQ7 95 aa4.9□□□□□ -1.63
SMAD4-209ENST00000589941 C5orf47Q569G3 176 aa4.89□□□□□ -1.63
SMAD4-209ENST00000589941 KRTAP5-11Q6L8G4 156 aa4.89□□□□□ -1.63
SMAD4-209ENST00000589941 C3orf22Q8N5N4 141 aa4.89□□□□□ -1.63
SMAD4-209ENST00000589941 SMIM11BQ8TCY0 68 aa4.89□□□□□ -1.63
SMAD4-209ENST00000589941 C2orf48Q96LS8 159 aa4.89□□□□□ -1.63
SMAD4-209ENST00000589941 CHCHD5Q9BSY4 110 aa4.89□□□□□ -1.63
SMAD4-209ENST00000589941 SND1-IT1Q9HBX3 110 aa4.89□□□□□ -1.63
SMAD4-209ENST00000589941 TRBV6-8A0A0A6YYG3 113 aa4.88□□□□□ -1.63
SMAD4-209ENST00000589941 UBE2L6O14933 153 aa4.88□□□□□ -1.63
SMAD4-209ENST00000589941 LCE1EQ5T753 118 aa4.88□□□□□ -1.63
SMAD4-209ENST00000589941 PANO1I0J062 215 aa4.87□□□□□ -1.63
SMAD4-209ENST00000589941 ATOX1O00244 68 aa4.87□□□□□ -1.63
SMAD4-209ENST00000589941 CRYGAP11844 174 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms