RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 TRAV22A0A0B4J277 110 aa3.93□□□□□ -1.78
SMAD4-208ENST00000589706 IGHV1-3A0A0C4DH29 117 aa3.93□□□□□ -1.78
SMAD4-208ENST00000589706 KRTAP16-1A8MUX0 517 aa3.93□□□□□ -1.78
SMAD4-208ENST00000589706 NCR3O14931 201 aa3.93□□□□□ -1.78
SMAD4-208ENST00000589706 TFF1P04155 84 aa3.93□□□□□ -1.78
SMAD4-208ENST00000589706 EGFEM1PQ0D2K5 195 aa3.93□□□□□ -1.78
SMAD4-208ENST00000589706 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.93□□□□□ -1.78
SMAD4-208ENST00000589706 LINC00269Q8N2A0 174 aa3.93□□□□□ -1.78
SMAD4-208ENST00000589706 CCL17Q92583 94 aa3.93□□□□□ -1.78
SMAD4-208ENST00000589706 GAFA1Q96PS6 74 aa3.93□□□□□ -1.78
SMAD4-208ENST00000589706 LIMD2Q9BT23 127 aa3.93□□□□□ -1.78
SMAD4-208ENST00000589706 IGHV3-21A0A0B4J1V1 117 aa3.92□□□□□ -1.78
SMAD4-208ENST00000589706 A6NN06 94 aa3.92□□□□□ -1.78
SMAD4-208ENST00000589706 LECT2O14960 151 aa3.92□□□□□ -1.78
SMAD4-208ENST00000589706 DNAH7Q8WXX0 4024 aa3.91□□□□□ -1.78
SMAD4-208ENST00000589706 IGLV11-55A0A075B6I3 123 aa3.91□□□□□ -1.78
SMAD4-208ENST00000589706 TRBV6-8A0A0A6YYG3 113 aa3.91□□□□□ -1.78
SMAD4-208ENST00000589706 IGHV3-35A0A0C4DH35 117 aa3.91□□□□□ -1.78
SMAD4-208ENST00000589706 IGKV2-29A2NJV5 120 aaPredicted RBP3.91□□□□□ -1.78
SMAD4-208ENST00000589706 NDPQ00604 133 aa3.91□□□□□ -1.78
SMAD4-208ENST00000589706 C9orf129Q5T035 196 aaKnown RBP3.91□□□□□ -1.78
SMAD4-208ENST00000589706 NKAPP1Q8N9T2 125 aa3.91□□□□□ -1.78
SMAD4-208ENST00000589706 SMIM11BQ8TCY0 68 aa3.91□□□□□ -1.78
SMAD4-208ENST00000589706 FRAS1Q86XX4 4008 aa3.91□□□□□ -1.78
SMAD4-208ENST00000589706 IGHV3-64DA0A0J9YX35 117 aa3.9□□□□□ -1.79
SMAD4-208ENST00000589706 M0QY20 66 aa3.9□□□□□ -1.79
SMAD4-208ENST00000589706 BPY2O14599 106 aa3.9□□□□□ -1.79
SMAD4-208ENST00000589706 RNASE3P12724 160 aaKnown RBP3.9□□□□□ -1.79
SMAD4-208ENST00000589706 MT3P25713 68 aa3.9□□□□□ -1.79
SMAD4-208ENST00000589706 ELOF1P60002 83 aaKnown RBP3.9□□□□□ -1.79
SMAD4-208ENST00000589706 KLK9Q2XQG4 91 aa3.9□□□□□ -1.79
SMAD4-208ENST00000589706 ASB16-AS1Q495Z4 193 aa3.9□□□□□ -1.79
SMAD4-208ENST00000589706 CLEC19AQ6UXS0 136 aa3.9□□□□□ -1.79
SMAD4-208ENST00000589706 KLK9Q9UKQ9 250 aa3.9□□□□□ -1.79
SMAD4-208ENST00000589706 A8MUN3 132 aa3.89□□□□□ -1.79
SMAD4-208ENST00000589706 NDUFB1O75438 58 aa3.89□□□□□ -1.79
SMAD4-208ENST00000589706 PRR4Q16378 134 aa3.89□□□□□ -1.79
SMAD4-208ENST00000589706 Q6ZQT0 140 aa3.89□□□□□ -1.79
SMAD4-208ENST00000589706 ZFAND2AQ8N6M9 145 aa3.89□□□□□ -1.79
SMAD4-208ENST00000589706 C11orf72Q8NBR9 251 aa3.89□□□□□ -1.79
SMAD4-208ENST00000589706 IGLV3-9A0A075B6K5 115 aa3.88□□□□□ -1.79
SMAD4-208ENST00000589706 C16orf90A8MZG2 172 aa3.88□□□□□ -1.79
SMAD4-208ENST00000589706 GNRH2O43555 120 aa3.88□□□□□ -1.79
SMAD4-208ENST00000589706 PSCAO43653 123 aa3.88□□□□□ -1.79
SMAD4-208ENST00000589706 HAMPP81172 84 aa3.88□□□□□ -1.79
SMAD4-208ENST00000589706 KIAA0087Q14695 138 aa3.88□□□□□ -1.79
SMAD4-208ENST00000589706 DEFB114Q30KQ6 69 aa3.88□□□□□ -1.79
SMAD4-208ENST00000589706 C1orf64Q8NEQ6 169 aa3.88□□□□□ -1.79
SMAD4-208ENST00000589706 KRTAP1-5Q9BYS1 174 aa3.88□□□□□ -1.79
SMAD4-208ENST00000589706 SND1-IT1Q9HBX3 110 aa3.88□□□□□ -1.79
SMAD4-208ENST00000589706 KIAA1109Q2LD37 5005 aa3.87□□□□□ -1.79
SMAD4-208ENST00000589706 IGLV8-61A0A075B6I0 122 aa3.87□□□□□ -1.79
SMAD4-208ENST00000589706 IGHV1OR15-1A0A075B7D0 117 aa3.87□□□□□ -1.79
SMAD4-208ENST00000589706 TRBV10-1A0A0K0K1A3 114 aa3.87□□□□□ -1.79
SMAD4-208ENST00000589706 HCG22E2RYF7 251 aa3.87□□□□□ -1.79
SMAD4-208ENST00000589706 IGHV1-46P01743 117 aa3.87□□□□□ -1.79
SMAD4-208ENST00000589706 HIGD2BQ4VC39 106 aa3.87□□□□□ -1.79
SMAD4-208ENST00000589706 PRR9Q5T870 116 aa3.87□□□□□ -1.79
SMAD4-208ENST00000589706 Q5VV11 94 aa3.87□□□□□ -1.79
SMAD4-208ENST00000589706 LINC00337Q8N6G1 96 aa3.87□□□□□ -1.79
SMAD4-208ENST00000589706 Q8N814 137 aa3.87□□□□□ -1.79
SMAD4-208ENST00000589706 NPBQ8NG41 125 aa3.87□□□□□ -1.79
SMAD4-208ENST00000589706 CDC42SE1Q9NRR8 79 aa3.87□□□□□ -1.79
SMAD4-208ENST00000589706 ZNRD1Q9P1U0 126 aa3.87□□□□□ -1.79
SMAD4-208ENST00000589706 CDKN2A-AS1Q9UH64 79 aa3.87□□□□□ -1.79
SMAD4-208ENST00000589706 IGKV2-28A0A075B6P5 120 aa3.86□□□□□ -1.79
SMAD4-208ENST00000589706 PSPHP1O15172 72 aa3.86□□□□□ -1.79
SMAD4-208ENST00000589706 IGKV2D-28P01615 120 aa3.86□□□□□ -1.79
SMAD4-208ENST00000589706 FAM104AQ969W3 186 aa3.86□□□□□ -1.79
SMAD4-208ENST00000589706 STARD9Q9P2P6 4700 aa3.86□□□□□ -1.79
SMAD4-208ENST00000589706 LOC101927531A0A1B0GV80 90 aa3.85□□□□□ -1.79
SMAD4-208ENST00000589706 TRBV6-4A0A1B0GX49 114 aa3.85□□□□□ -1.79
SMAD4-208ENST00000589706 CHKB-CPT1BH3BT56 60 aa3.85□□□□□ -1.79
SMAD4-208ENST00000589706 IGLV1-47P01700 117 aa3.85□□□□□ -1.79
SMAD4-208ENST00000589706 IGHV1-8P0DP01 117 aa3.85□□□□□ -1.79
SMAD4-208ENST00000589706 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
SMAD4-208ENST00000589706 NTM-AS1Q6ZSK4 140 aa3.85□□□□□ -1.79
SMAD4-208ENST00000589706 ZCCHC13Q8WW36 166 aaKnown RBP3.85□□□□□ -1.79
SMAD4-208ENST00000589706 MUC4Q99102 2169 aa3.85□□□□□ -1.79
SMAD4-208ENST00000589706 ABCA13Q86UQ4 5058 aa3.84□□□□□ -1.79
SMAD4-208ENST00000589706 IGHV7-81A0A0B4J1V7 117 aa3.84□□□□□ -1.79
SMAD4-208ENST00000589706 KLLNB2CW77 178 aa3.84□□□□□ -1.79
SMAD4-208ENST00000589706 APELAP0DMC3 54 aa3.84□□□□□ -1.79
SMAD4-208ENST00000589706 CCL3L1P16619 93 aa3.84□□□□□ -1.79
SMAD4-208ENST00000589706 LINC01554Q52M75 96 aa3.84□□□□□ -1.79
SMAD4-208ENST00000589706 Q9BRP9 147 aa3.84□□□□□ -1.79
SMAD4-208ENST00000589706 KAAG1Q9UBP8 84 aa3.84□□□□□ -1.79
SMAD4-208ENST00000589706 HECTD4Q9Y4D8 3996 aa3.83□□□□□ -1.8
SMAD4-208ENST00000589706 A0A1B0GW54 56 aa3.83□□□□□ -1.8
SMAD4-208ENST00000589706 PRB4P10163 310 aaPredicted RBP3.83□□□□□ -1.8
SMAD4-208ENST00000589706 LY6EQ16553 131 aa3.83□□□□□ -1.8
SMAD4-208ENST00000589706 FAM74A4Q5TZK3 123 aa3.83□□□□□ -1.8
SMAD4-208ENST00000589706 SPTSSBQ8NFR3 76 aa3.83□□□□□ -1.8
SMAD4-208ENST00000589706 CHCHD10Q8WYQ3 142 aaPredicted RBP3.83□□□□□ -1.8
SMAD4-208ENST00000589706 CHCHD7Q9BUK0 85 aa3.83□□□□□ -1.8
SMAD4-208ENST00000589706 CDC42SE2Q9NRR3 84 aa3.83□□□□□ -1.8
SMAD4-208ENST00000589706 H3BUX3 64 aa3.82□□□□□ -1.8
SMAD4-208ENST00000589706 LY6G6CO95867 125 aa3.82□□□□□ -1.8
SMAD4-208ENST00000589706 MP68P56378 58 aa3.82□□□□□ -1.8
SMAD4-208ENST00000589706 C9orf116Q5BN46 136 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms