RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 SMDT1Q9H4I9 107 aa3.31□□□□□ -1.88
DNMT1-220ENST00000589351 OSTCQ9NRP0 149 aa3.31□□□□□ -1.88
DNMT1-220ENST00000589351 TP73-AS1Q9UF72 201 aa3.31□□□□□ -1.88
DNMT1-220ENST00000589351 KRTAP1-4P0C5Y4 121 aa3.3□□□□□ -1.88
DNMT1-220ENST00000589351 SCGB1C2P0DMR2 95 aa3.3□□□□□ -1.88
DNMT1-220ENST00000589351 CRYGAP11844 174 aa3.3□□□□□ -1.88
DNMT1-220ENST00000589351 IFI27P40305 119 aaPredicted RBP3.3□□□□□ -1.88
DNMT1-220ENST00000589351 RPL28P46779 137 aaKnown RBP3.3□□□□□ -1.88
DNMT1-220ENST00000589351 MRPS36P82909 103 aaKnown RBP3.3□□□□□ -1.88
DNMT1-220ENST00000589351 FAM104BQ5XKR9 115 aa3.3□□□□□ -1.88
DNMT1-220ENST00000589351 TYMSOSQ8TAI1 123 aa3.3□□□□□ -1.88
DNMT1-220ENST00000589351 SMIM7Q9BQ49 75 aa3.3□□□□□ -1.88
DNMT1-220ENST00000589351 C6orf48Q9UBA6 75 aa3.3□□□□□ -1.88
DNMT1-220ENST00000589351 TRBV24-1A0A075B6N3 115 aa3.29□□□□□ -1.88
DNMT1-220ENST00000589351 ZNF727A8MUV8 499 aa3.29□□□□□ -1.88
DNMT1-220ENST00000589351 RPL39P62891 51 aaKnown RBP3.29□□□□□ -1.88
DNMT1-220ENST00000589351 MRPL51Q4U2R6 128 aaKnown RBP3.29□□□□□ -1.88
DNMT1-220ENST00000589351 CST9LQ9H4G1 147 aa3.29□□□□□ -1.88
DNMT1-220ENST00000589351 C20orf202A1L168 122 aa3.28□□□□□ -1.88
DNMT1-220ENST00000589351 C9JQL5 133 aa3.28□□□□□ -1.88
DNMT1-220ENST00000589351 KTN1-AS1Q86SY8 53 aa3.28□□□□□ -1.88
DNMT1-220ENST00000589351 KRTAP11-1Q8IUC1 163 aa3.28□□□□□ -1.88
DNMT1-220ENST00000589351 PRR15Q8IV56 129 aa3.28□□□□□ -1.88
DNMT1-220ENST00000589351 TCTE3Q8IZS6 198 aa3.28□□□□□ -1.88
DNMT1-220ENST00000589351 SMIM2Q9BVW6 85 aa3.28□□□□□ -1.88
DNMT1-220ENST00000589351 C22orf24Q9Y442 160 aa3.28□□□□□ -1.88
DNMT1-220ENST00000589351 KRTAP16-1A8MUX0 517 aa3.27□□□□□ -1.89
DNMT1-220ENST00000589351 ZNF73O43830 326 aaPredicted RBP3.27□□□□□ -1.89
DNMT1-220ENST00000589351 MT-ND4LP03901 98 aa3.27□□□□□ -1.89
DNMT1-220ENST00000589351 C9orf129Q5T035 196 aaKnown RBP3.27□□□□□ -1.89
DNMT1-220ENST00000589351 C2orf82Q6UX34 121 aa3.27□□□□□ -1.89
DNMT1-220ENST00000589351 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
DNMT1-220ENST00000589351 TMEM141Q96I45 108 aa3.27□□□□□ -1.89
DNMT1-220ENST00000589351 NAA38Q9BRA0 125 aaKnown RBP3.27□□□□□ -1.89
DNMT1-220ENST00000589351 TOMM7Q9P0U1 55 aa3.27□□□□□ -1.89
DNMT1-220ENST00000589351 V9GYV3 84 aa3.27□□□□□ -1.89
DNMT1-220ENST00000589351 IGKV2D-26A0A0A0MRZ7 120 aa3.26□□□□□ -1.89
DNMT1-220ENST00000589351 D6R8Y8 96 aa3.26□□□□□ -1.89
DNMT1-220ENST00000589351 BCE1O60756 84 aa3.26□□□□□ -1.89
DNMT1-220ENST00000589351 CFC1BP0CG36 223 aa3.26□□□□□ -1.89
DNMT1-220ENST00000589351 S100A2P29034 98 aa3.26□□□□□ -1.89
DNMT1-220ENST00000589351 SEC11AP67812 179 aa3.26□□□□□ -1.89
DNMT1-220ENST00000589351 KRTAP7-1Q8IUC3 87 aa3.26□□□□□ -1.89
DNMT1-220ENST00000589351 SMIM27A0A1W2PRY6 76 aa3.25□□□□□ -1.89
DNMT1-220ENST00000589351 SERF1AO75920 110 aa3.25□□□□□ -1.89
DNMT1-220ENST00000589351 UBE2AP49459 152 aa3.25□□□□□ -1.89
DNMT1-220ENST00000589351 ALKAL2Q6UX46 152 aa3.25□□□□□ -1.89
DNMT1-220ENST00000589351 LCA10Q71F78 164 aa3.25□□□□□ -1.89
DNMT1-220ENST00000589351 Q8IZM0 81 aa3.25□□□□□ -1.89
DNMT1-220ENST00000589351 ORMDL3Q8N138 153 aa3.25□□□□□ -1.89
DNMT1-220ENST00000589351 LINC00304Q8N9R0 145 aa3.25□□□□□ -1.89
DNMT1-220ENST00000589351 TOMM6Q96B49 74 aa3.25□□□□□ -1.89
DNMT1-220ENST00000589351 IMUPQ9GZP8 106 aa3.25□□□□□ -1.89
DNMT1-220ENST00000589351 XAGE1AQ9HD64 81 aa3.25□□□□□ -1.89
DNMT1-220ENST00000589351 LAMTOR3Q9UHA4 124 aa3.25□□□□□ -1.89
DNMT1-220ENST00000589351 IGLV7-46A0A075B6I9 117 aa3.24□□□□□ -1.89
DNMT1-220ENST00000589351 TRAV9-1A0A075B6T8 112 aa3.24□□□□□ -1.89
DNMT1-220ENST00000589351 F8VRH5 84 aa3.24□□□□□ -1.89
DNMT1-220ENST00000589351 M0R378 163 aa3.24□□□□□ -1.89
DNMT1-220ENST00000589351 DPM2O94777 84 aa3.24□□□□□ -1.89
DNMT1-220ENST00000589351 NPYP01303 97 aa3.24□□□□□ -1.89
DNMT1-220ENST00000589351 TRGC2P03986 189 aa3.24□□□□□ -1.89
DNMT1-220ENST00000589351 SRP19P09132 144 aaKnown RBP3.24□□□□□ -1.89
DNMT1-220ENST00000589351 CXCL5P42830 114 aa3.24□□□□□ -1.89
DNMT1-220ENST00000589351 ADIRFQ15847 76 aa3.24□□□□□ -1.89
DNMT1-220ENST00000589351 TPRXLQ17RH7 258 aa3.24□□□□□ -1.89
DNMT1-220ENST00000589351 FAM229BQ4G0N7 80 aa3.24□□□□□ -1.89
DNMT1-220ENST00000589351 LYRM7Q5U5X0 104 aa3.24□□□□□ -1.89
DNMT1-220ENST00000589351 TMEM136Q6ZRR5 245 aa3.24□□□□□ -1.89
DNMT1-220ENST00000589351 PRELID3AQ96N28 172 aa3.24□□□□□ -1.89
DNMT1-220ENST00000589351 C8orf17Q9NRJ1 99 aa3.24□□□□□ -1.89
DNMT1-220ENST00000589351 NAT8Q9UHE5 227 aa3.24□□□□□ -1.89
DNMT1-220ENST00000589351 K7EMI3 77 aa3.23□□□□□ -1.89
DNMT1-220ENST00000589351 M0R143 59 aa3.23□□□□□ -1.89
DNMT1-220ENST00000589351 MRPL54Q6P161 138 aaKnown RBP3.23□□□□□ -1.89
DNMT1-220ENST00000589351 SPAG11AQ6PDA7 123 aa3.23□□□□□ -1.89
DNMT1-220ENST00000589351 SLC25A34Q6PIV7 304 aa3.23□□□□□ -1.89
DNMT1-220ENST00000589351 Q8N377 158 aa3.23□□□□□ -1.89
DNMT1-220ENST00000589351 C3orf22Q8N5N4 141 aa3.23□□□□□ -1.89
DNMT1-220ENST00000589351 LINC00167Q96N53 147 aa3.23□□□□□ -1.89
DNMT1-220ENST00000589351 RETNLBQ9BQ08 111 aa3.23□□□□□ -1.89
DNMT1-220ENST00000589351 MUC2Q02817 5179 aa3.23□□□□□ -1.89
DNMT1-220ENST00000589351 TAX1BP3O14907 124 aa3.22□□□□□ -1.89
DNMT1-220ENST00000589351 PEA15Q15121 130 aa3.22□□□□□ -1.89
DNMT1-220ENST00000589351 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
DNMT1-220ENST00000589351 CEND1Q8N111 149 aa3.22□□□□□ -1.89
DNMT1-220ENST00000589351 AMELXQ99217 191 aa3.22□□□□□ -1.89
DNMT1-220ENST00000589351 SNHG12Q9BXW3 62 aa3.22□□□□□ -1.89
DNMT1-220ENST00000589351 A0A1B0GVX0 72 aa3.21□□□□□ -1.9
DNMT1-220ENST00000589351 LINC01549A6NIU2 74 aa3.21□□□□□ -1.9
DNMT1-220ENST00000589351 Q8N8P6 123 aa3.21□□□□□ -1.9
DNMT1-220ENST00000589351 LITAFQ99732 161 aa3.21□□□□□ -1.9
DNMT1-220ENST00000589351 ANAPC11Q9NYG5 84 aa3.21□□□□□ -1.9
DNMT1-220ENST00000589351 KRTAP13-2Q52LG2 175 aa3.2□□□□□ -1.9
DNMT1-220ENST00000589351 FP248Q71RG6 208 aaPredicted RBP3.2□□□□□ -1.9
DNMT1-220ENST00000589351 COX7B2Q8TF08 81 aa3.2□□□□□ -1.9
DNMT1-220ENST00000589351 NXT2Q9NPJ8 142 aaKnown RBP3.2□□□□□ -1.9
DNMT1-220ENST00000589351 CDKN2A-AS1Q9UH64 79 aa3.2□□□□□ -1.9
DNMT1-220ENST00000589351 IGKV2-28A0A075B6P5 120 aa3.19□□□□□ -1.9
DNMT1-220ENST00000589351 TRBV7-6A0A0J9YX20 115 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms