RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 RPL13AP40429 203 aaKnown RBP10.5□□□□□ -0.73
SCAMP4-211ENST00000588907 C1orf137Q5JT78 98 aa10.5□□□□□ -0.73
SCAMP4-211ENST00000588907 ZNF73O43830 326 aaPredicted RBP10.49□□□□□ -0.73
SCAMP4-211ENST00000588907 SPRR1AP35321 89 aa10.49□□□□□ -0.73
SCAMP4-211ENST00000588907 DIRC1Q969H9 104 aa10.49□□□□□ -0.73
SCAMP4-211ENST00000588907 KRTAP11-1Q8IUC1 163 aa10.48□□□□□ -0.73
SCAMP4-211ENST00000588907 Q8N1X5 172 aa10.48□□□□□ -0.73
SCAMP4-211ENST00000588907 FAT1Q14517 4588 aa10.48□□□□□ -0.73
SCAMP4-211ENST00000588907 TRBV7-6A0A0J9YX20 115 aa10.47□□□□□ -0.73
SCAMP4-211ENST00000588907 ETDCA0A1B0GVM5 59 aa10.47□□□□□ -0.73
SCAMP4-211ENST00000588907 PCP4L1A6NKN8 68 aa10.46□□□□□ -0.73
SCAMP4-211ENST00000588907 H0Y9J4 135 aa10.46□□□□□ -0.73
SCAMP4-211ENST00000588907 IGLV7-43P04211 117 aa10.45□□□□□ -0.74
SCAMP4-211ENST00000588907 RPL28P46779 137 aaKnown RBP10.45□□□□□ -0.74
SCAMP4-211ENST00000588907 UBE2AP49459 152 aa10.45□□□□□ -0.74
SCAMP4-211ENST00000588907 Q1RN00 199 aa10.45□□□□□ -0.74
SCAMP4-211ENST00000588907 Q5VSD8 79 aa10.45□□□□□ -0.74
SCAMP4-211ENST00000588907 SMIM11BQ8TCY0 68 aa10.45□□□□□ -0.74
SCAMP4-211ENST00000588907 VAMP3Q15836 100 aa10.44□□□□□ -0.74
SCAMP4-211ENST00000588907 FAM19A1Q7Z5A9 133 aa10.44□□□□□ -0.74
SCAMP4-211ENST00000588907 KRTAP4-16G5E9R7 235 aaPredicted RBP10.43□□□□□ -0.74
SCAMP4-211ENST00000588907 C6orf99Q4VX62 202 aa10.43□□□□□ -0.74
SCAMP4-211ENST00000588907 H7C2G1 150 aa10.42□□□□□ -0.74
SCAMP4-211ENST00000588907 K7ERJ3 54 aa10.42□□□□□ -0.74
SCAMP4-211ENST00000588907 ZNF861PO60384 105 aa10.42□□□□□ -0.74
SCAMP4-211ENST00000588907 BATFQ16520 125 aa10.42□□□□□ -0.74
SCAMP4-211ENST00000588907 Q6ZRX8 168 aa10.42□□□□□ -0.74
SCAMP4-211ENST00000588907 B5MCH6 92 aa10.4□□□□□ -0.74
SCAMP4-211ENST00000588907 COX7BP24311 80 aa10.4□□□□□ -0.74
SCAMP4-211ENST00000588907 ELOF1P60002 83 aaKnown RBP10.4□□□□□ -0.74
SCAMP4-211ENST00000588907 KRTAP13-1Q8IUC0 172 aa10.39□□□□□ -0.75
SCAMP4-211ENST00000588907 COX6CP09669 75 aa10.38□□□□□ -0.75
SCAMP4-211ENST00000588907 KRTAP10-4P60372 401 aaPredicted RBP10.38□□□□□ -0.75
SCAMP4-211ENST00000588907 PRLHP81277 87 aa10.38□□□□□ -0.75
SCAMP4-211ENST00000588907 SPINK6Q6UWN8 80 aa10.38□□□□□ -0.75
SCAMP4-211ENST00000588907 DHRS4-AS1Q9P1J3 65 aa10.38□□□□□ -0.75
SCAMP4-211ENST00000588907 H0YGX0 51 aa10.37□□□□□ -0.75
SCAMP4-211ENST00000588907 TSPAN13O95857 204 aa10.37□□□□□ -0.75
SCAMP4-211ENST00000588907 INAFM2P0DMQ5 153 aa10.37□□□□□ -0.75
SCAMP4-211ENST00000588907 SNCGO76070 127 aa10.36□□□□□ -0.75
SCAMP4-211ENST00000588907 PSMB2P49721 201 aa10.36□□□□□ -0.75
SCAMP4-211ENST00000588907 SLC25A20O43772 301 aa10.35□□□□□ -0.75
SCAMP4-211ENST00000588907 SNHG12Q9BXW3 62 aa10.35□□□□□ -0.75
SCAMP4-211ENST00000588907 HERC2O95714 4834 aa10.34□□□□□ -0.75
SCAMP4-211ENST00000588907 HIGD2AQ9BW72 106 aa10.34□□□□□ -0.75
SCAMP4-211ENST00000588907 COL5A1-AS1Q5SY13 56 aa10.33□□□□□ -0.76
SCAMP4-211ENST00000588907 LYRM7Q5U5X0 104 aa10.33□□□□□ -0.76
SCAMP4-211ENST00000588907 PKHD1L1Q86WI1 4243 aa10.32□□□□□ -0.76
SCAMP4-211ENST00000588907 TRIAP1O43715 76 aa10.32□□□□□ -0.76
SCAMP4-211ENST00000588907 ZNF706Q9Y5V0 76 aaPredicted RBP10.32□□□□□ -0.76
SCAMP4-211ENST00000588907 SMCR5Q8TEV8 140 aa10.31□□□□□ -0.76
SCAMP4-211ENST00000588907 Q9BRP9 147 aa10.31□□□□□ -0.76
SCAMP4-211ENST00000588907 A0A1B0GX51 115 aa10.3□□□□□ -0.76
SCAMP4-211ENST00000588907 LINC00575Q6W349 94 aa10.3□□□□□ -0.76
SCAMP4-211ENST00000588907 hADV29S1A0JD25 119 aa10.28□□□□□ -0.76
SCAMP4-211ENST00000588907 SCGB1C2P0DMR2 95 aa10.28□□□□□ -0.76
SCAMP4-211ENST00000588907 SRRM2Q9UQ35 2752 aaKnown RBP10.27□□□□□ -0.76
SCAMP4-211ENST00000588907 C9orf118A6NHY6 69 aa10.27□□□□□ -0.77
SCAMP4-211ENST00000588907 TAX1BP3O14907 124 aa10.26□□□□□ -0.77
SCAMP4-211ENST00000588907 KRTAP17-1Q9BYP8 105 aa10.26□□□□□ -0.77
SCAMP4-211ENST00000588907 GHRHP01286 108 aa10.25□□□□□ -0.77
SCAMP4-211ENST00000588907 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.24□□□□□ -0.77
SCAMP4-211ENST00000588907 H3BUT2 72 aa10.23□□□□□ -0.77
SCAMP4-211ENST00000588907 TRBV20-1A0A075B6N2 111 aa10.22□□□□□ -0.77
SCAMP4-211ENST00000588907 ERC2-IT1O76042 136 aa10.22□□□□□ -0.77
SCAMP4-211ENST00000588907 DNAL4O96015 105 aa10.22□□□□□ -0.77
SCAMP4-211ENST00000588907 OCIAD2Q56VL3 154 aa10.22□□□□□ -0.77
SCAMP4-211ENST00000588907 SPRR4Q96PI1 79 aa10.22□□□□□ -0.77
SCAMP4-211ENST00000588907 A0A1W2PPM0 123 aa10.2□□□□□ -0.78
SCAMP4-211ENST00000588907 H3BQ85 93 aa10.2□□□□□ -0.78
SCAMP4-211ENST00000588907 LST1O00453 97 aa10.2□□□□□ -0.78
SCAMP4-211ENST00000588907 TRACP01848 142 aa10.2□□□□□ -0.78
SCAMP4-211ENST00000588907 FABP2P12104 132 aa10.2□□□□□ -0.78
SCAMP4-211ENST00000588907 ATXN8Q156A1 80 aa10.2□□□□□ -0.78
SCAMP4-211ENST00000588907 FAM229BQ4G0N7 80 aa10.2□□□□□ -0.78
SCAMP4-211ENST00000588907 PPDPFLQ8WWR9 84 aa10.2□□□□□ -0.78
SCAMP4-211ENST00000588907 CLEC2BQ92478 149 aa10.2□□□□□ -0.78
SCAMP4-211ENST00000588907 FAM218AQ96MZ4 157 aa10.2□□□□□ -0.78
SCAMP4-211ENST00000588907 LINC00483Q53H64 154 aa10.19□□□□□ -0.78
SCAMP4-211ENST00000588907 Q6ZQY7 126 aa10.19□□□□□ -0.78
SCAMP4-211ENST00000588907 NAA38Q9BRA0 125 aaKnown RBP10.19□□□□□ -0.78
SCAMP4-211ENST00000588907 IGLV5-48A0A075B6I7 105 aa10.18□□□□□ -0.78
SCAMP4-211ENST00000588907 TEX49A0A1B0GTD5 131 aa10.18□□□□□ -0.78
SCAMP4-211ENST00000588907 SPRR1BP22528 89 aa10.17□□□□□ -0.78
SCAMP4-211ENST00000588907 GAGE2AQ6NT46 116 aa10.17□□□□□ -0.78
SCAMP4-211ENST00000588907 KRTAP4-5Q9BYR2 181 aa10.17□□□□□ -0.78
SCAMP4-211ENST00000588907 KRTAP1-4P0C5Y4 121 aa10.16□□□□□ -0.78
SCAMP4-211ENST00000588907 ST20-AS1Q8NBB2 130 aa10.16□□□□□ -0.78
SCAMP4-211ENST00000588907 TCL1BO95988 128 aa10.14□□□□□ -0.79
SCAMP4-211ENST00000588907 CRYGAP11844 174 aa10.14□□□□□ -0.79
SCAMP4-211ENST00000588907 ORMDL1Q9P0S3 153 aa10.14□□□□□ -0.79
SCAMP4-211ENST00000588907 OXTP01178 125 aa10.13□□□□□ -0.79
SCAMP4-211ENST00000588907 DEFB105AQ8NG35 78 aa10.13□□□□□ -0.79
SCAMP4-211ENST00000588907 LINC01600Q96MT4 127 aa10.12□□□□□ -0.79
SCAMP4-211ENST00000588907 LAMTOR3Q9UHA4 124 aa10.12□□□□□ -0.79
SCAMP4-211ENST00000588907 LINC01547P58512 204 aaPredicted RBP10.11□□□□□ -0.79
SCAMP4-211ENST00000588907 SPCS1Q9Y6A9 102 aa10.11□□□□□ -0.79
SCAMP4-211ENST00000588907 TMEM256-PLSCR3K7ERE1 68 aa10.1□□□□□ -0.79
SCAMP4-211ENST00000588907 Q8N377 158 aa10.1□□□□□ -0.79
SCAMP4-211ENST00000588907 ABCA13Q86UQ4 5058 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms