RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 LINC01558Q9Y6Z2 57 aa5.26□□□□□ -1.57
LAMA3-210ENST00000588770 LAMA3Q16787 3333 aa5.26□□□□□ -1.57
LAMA3-210ENST00000588770 IGLV9-49A0A0B4J1Y8 123 aa5.26□□□□□ -1.57
LAMA3-210ENST00000588770 ASB16-AS1Q495Z4 193 aa5.25□□□□□ -1.57
LAMA3-210ENST00000588770 ADM2Q7Z4H4 148 aa5.25□□□□□ -1.57
LAMA3-210ENST00000588770 IGKV2-24A0A0C4DH68 120 aa5.25□□□□□ -1.57
LAMA3-210ENST00000588770 A0A096LNT2 108 aa5.24□□□□□ -1.57
LAMA3-210ENST00000588770 DEFB4AO15263 64 aa5.24□□□□□ -1.57
LAMA3-210ENST00000588770 ZFYVE26Q68DK2 2539 aa5.24□□□□□ -1.57
LAMA3-210ENST00000588770 NAV2Q8IVL1 2488 aa5.24□□□□□ -1.57
LAMA3-210ENST00000588770 KPRPQ5T749 579 aaPredicted RBP5.23□□□□□ -1.57
LAMA3-210ENST00000588770 ZCCHC13Q8WW36 166 aaKnown RBP5.23□□□□□ -1.57
LAMA3-210ENST00000588770 C18orf65Q6ZTR6 163 aa5.23□□□□□ -1.57
LAMA3-210ENST00000588770 NBEAQ8NFP9 2946 aa5.23□□□□□ -1.57
LAMA3-210ENST00000588770 NCOR2Q9Y618 2525 aa5.23□□□□□ -1.57
LAMA3-210ENST00000588770 SPTBN5Q9NRC6 3674 aaKnown RBP5.22□□□□□ -1.57
LAMA3-210ENST00000588770 FBXL19-AS1Q494R0 122 aa5.22□□□□□ -1.57
LAMA3-210ENST00000588770 IGKV2D-30A0A075B6S6 120 aa5.22□□□□□ -1.57
LAMA3-210ENST00000588770 K7EQZ3 153 aa5.22□□□□□ -1.57
LAMA3-210ENST00000588770 IGKV2-30P06310 120 aa5.22□□□□□ -1.57
LAMA3-210ENST00000588770 COL27A1Q8IZC6 1860 aaPredicted RBP5.21□□□□□ -1.57
LAMA3-210ENST00000588770 CDH23Q9H251 3354 aa5.21□□□□□ -1.58
LAMA3-210ENST00000588770 USP34Q70CQ2 3546 aa5.21□□□□□ -1.58
LAMA3-210ENST00000588770 ABCA12Q86UK0 2595 aa5.21□□□□□ -1.58
LAMA3-210ENST00000588770 RPL37AP61513 92 aaKnown RBP5.21□□□□□ -1.58
LAMA3-210ENST00000588770 KCNQ1DNQ9H478 68 aa5.21□□□□□ -1.58
LAMA3-210ENST00000588770 RPL37AP8A6NKH3 93 aa5.2□□□□□ -1.58
LAMA3-210ENST00000588770 ACANP16112 2415 aa5.2□□□□□ -1.58
LAMA3-210ENST00000588770 APLNQ9ULZ1 77 aa5.2□□□□□ -1.58
LAMA3-210ENST00000588770 LINC00612Q8N6U2 182 aa5.19□□□□□ -1.58
LAMA3-210ENST00000588770 LMO4P61968 165 aa5.19□□□□□ -1.58
LAMA3-210ENST00000588770 XIRP2A4UGR9 3374 aa5.19□□□□□ -1.58
LAMA3-210ENST00000588770 IGLV5-52A0A0A0MRZ9 124 aa5.19□□□□□ -1.58
LAMA3-210ENST00000588770 PRO3102Q9H379 93 aa5.18□□□□□ -1.58
LAMA3-210ENST00000588770 IGF2RP11717 2491 aa5.18□□□□□ -1.58
LAMA3-210ENST00000588770 LCE6AA0A183 80 aa5.18□□□□□ -1.58
LAMA3-210ENST00000588770 LINC00528Q8N1L1 170 aa5.18□□□□□ -1.58
LAMA3-210ENST00000588770 MTORP42345 2549 aa5.18□□□□□ -1.58
LAMA3-210ENST00000588770 LRRK2Q5S007 2527 aa5.18□□□□□ -1.58
LAMA3-210ENST00000588770 TLX1NBP0CAT3 122 aa5.18□□□□□ -1.58
LAMA3-210ENST00000588770 WWC2-AS2Q96NR7 200 aa5.18□□□□□ -1.58
LAMA3-210ENST00000588770 POLQO75417 2590 aa5.17□□□□□ -1.58
LAMA3-210ENST00000588770 RANBP2P49792 3224 aaKnown RBP5.17□□□□□ -1.58
LAMA3-210ENST00000588770 A8MWP4 228 aa5.17□□□□□ -1.58
LAMA3-210ENST00000588770 ODF3L2Q3SX64 289 aa5.17□□□□□ -1.58
LAMA3-210ENST00000588770 VPS13AQ96RL7 3174 aa5.17□□□□□ -1.58
LAMA3-210ENST00000588770 CEP295Q9C0D2 2601 aa5.17□□□□□ -1.58
LAMA3-210ENST00000588770 LINC00483Q53H64 154 aa5.17□□□□□ -1.58
LAMA3-210ENST00000588770 VCANP13611 3396 aa5.17□□□□□ -1.58
LAMA3-210ENST00000588770 EGFEM1PQ0D2K5 195 aa5.16□□□□□ -1.58
LAMA3-210ENST00000588770 MUC3AQ02505 3323 aa5.15□□□□□ -1.58
LAMA3-210ENST00000588770 IGLV1-51P01701 117 aa5.15□□□□□ -1.59
LAMA3-210ENST00000588770 IGLV1-40P01703 118 aa5.15□□□□□ -1.59
LAMA3-210ENST00000588770 Q8NBF4 154 aa5.15□□□□□ -1.59
LAMA3-210ENST00000588770 IGLV6-57P01721 117 aa5.15□□□□□ -1.59
LAMA3-210ENST00000588770 IGLV5-37A0A075B6J1 123 aa5.14□□□□□ -1.59
LAMA3-210ENST00000588770 COL6A3P12111 3177 aa5.14□□□□□ -1.59
LAMA3-210ENST00000588770 Q6YL49 198 aa5.14□□□□□ -1.59
LAMA3-210ENST00000588770 UNC80Q8N2C7 3258 aa5.13□□□□□ -1.59
LAMA3-210ENST00000588770 COX6B2Q6YFQ2 88 aa5.13□□□□□ -1.59
LAMA3-210ENST00000588770 PRUNE2Q8WUY3 3088 aa5.12□□□□□ -1.59
LAMA3-210ENST00000588770 SPTBN4Q9H254 2564 aa5.12□□□□□ -1.59
LAMA3-210ENST00000588770 A0A1W2PNM2 257 aa5.12□□□□□ -1.59
LAMA3-210ENST00000588770 ROMO1P60602 79 aa5.12□□□□□ -1.59
LAMA3-210ENST00000588770 MGAQ8IWI9 3026 aa5.11□□□□□ -1.59
LAMA3-210ENST00000588770 DSCR10P59022 87 aa5.11□□□□□ -1.59
LAMA3-210ENST00000588770 CR1P17927 2039 aa5.11□□□□□ -1.59
LAMA3-210ENST00000588770 A0A087X002 238 aa5.1□□□□□ -1.59
LAMA3-210ENST00000588770 TRANK1O15050 2925 aa5.09□□□□□ -1.6
LAMA3-210ENST00000588770 CIRBP-AS1Q8TBR5 109 aa5.09□□□□□ -1.6
LAMA3-210ENST00000588770 ANKRD11Q6UB99 2663 aaPredicted RBP5.09□□□□□ -1.6
LAMA3-210ENST00000588770 TRIOO75962 3097 aa5.09□□□□□ -1.6
LAMA3-210ENST00000588770 Q6ZR54 194 aa5.08□□□□□ -1.6
LAMA3-210ENST00000588770 DMDP11532 3685 aa5.08□□□□□ -1.6
LAMA3-210ENST00000588770 WDFY3Q8IZQ1 3526 aa5.08□□□□□ -1.6
LAMA3-210ENST00000588770 A0A1B0GUV1 79 aa5.08□□□□□ -1.6
LAMA3-210ENST00000588770 CHD7Q9P2D1 2997 aa5.08□□□□□ -1.6
LAMA3-210ENST00000588770 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
LAMA3-210ENST00000588770 CNBPP62633 177 aaKnown RBP5.06□□□□□ -1.6
LAMA3-210ENST00000588770 KLK9Q2XQG4 91 aa5.06□□□□□ -1.6
LAMA3-210ENST00000588770 IGLV1-50A0A075B6I6 118 aa5.05□□□□□ -1.6
LAMA3-210ENST00000588770 LELP1Q5T871 98 aa5.05□□□□□ -1.6
LAMA3-210ENST00000588770 RTL8CO15255 209 aa5.04□□□□□ -1.6
LAMA3-210ENST00000588770 DSPP15924 2871 aaKnown RBP5.04□□□□□ -1.6
LAMA3-210ENST00000588770 IGLV5-48A0A075B6I7 105 aa5.04□□□□□ -1.6
LAMA3-210ENST00000588770 CELSR3Q9NYQ7 3312 aa5.04□□□□□ -1.6
LAMA3-210ENST00000588770 MRPL34Q9BQ48 92 aaKnown RBP5.03□□□□□ -1.6
LAMA3-210ENST00000588770 HRES1P13985 223 aa5.03□□□□□ -1.6
LAMA3-210ENST00000588770 Q8N377 158 aa5.03□□□□□ -1.6
LAMA3-210ENST00000588770 AKAP13Q12802 2813 aa5.03□□□□□ -1.6
LAMA3-210ENST00000588770 C9orf163Q8N9P6 203 aa5.03□□□□□ -1.6
LAMA3-210ENST00000588770 MYO15AQ9UKN7 3530 aa5.03□□□□□ -1.6
LAMA3-210ENST00000588770 FRYQ5TBA9 3013 aa5.02□□□□□ -1.61
LAMA3-210ENST00000588770 DNAH14Q0VDD8 3507 aa5.02□□□□□ -1.61
LAMA3-210ENST00000588770 SPATA8Q6RVD6 105 aa5.01□□□□□ -1.61
LAMA3-210ENST00000588770 Q8NDZ9 215 aa5□□□□□ -1.61
LAMA3-210ENST00000588770 FLG2Q5D862 2391 aaPredicted RBP4.99□□□□□ -1.61
LAMA3-210ENST00000588770 A0A0G2JQZ4 141 aa4.99□□□□□ -1.61
LAMA3-210ENST00000588770 A0A1W2PNN7 141 aa4.99□□□□□ -1.61
LAMA3-210ENST00000588770 KRTAP25-1Q3LHN0 102 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms