RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 IGHV1-18A0A0C4DH31 117 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 TRBV10-3A0A0K0K1G6 114 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 TRBV10-2A0A0K0K1G8 114 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 TCRBV4S1A1TA0A5B7 111 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 HCG22E2RYF7 251 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 CHKB-CPT1BH3BT56 60 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 P0C880 135 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 C3orf79P0CE67 100 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 DSCR4P56555 118 aaPredicted RBP1.51□□□□□ -2.17
VPS4B-203ENST00000588323 EDDM3BP56851 147 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 SPANXN5Q5MJ07 72 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 C1orf134Q5TEV5 83 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 Q8IYB0 196 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 Q8N814 137 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 TMEM254Q8TBM7 123 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 C20orf166-AS1Q96NR2 134 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 ODF3Q96PU9 254 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 KRTAP4-1Q9BYQ7 146 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 HILPDAQ9Y5L2 63 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 PLECQ15149 4684 aaKnown RBP1.51□□□□□ -2.17
VPS4B-203ENST00000588323 ARFGEF3Q5TH69 2177 aa1.51□□□□□ -2.17
VPS4B-203ENST00000588323 DMBT1Q9UGM3 2413 aaPredicted RBP1.5□□□□□ -2.17
VPS4B-203ENST00000588323 ALMS1Q8TCU4 4167 aa1.5□□□□□ -2.17
VPS4B-203ENST00000588323 SDHAF1A6NFY7 115 aa1.5□□□□□ -2.17
VPS4B-203ENST00000588323 CEBPZOSA8MTT3 80 aa1.5□□□□□ -2.17
VPS4B-203ENST00000588323 CCL22O00626 93 aa1.5□□□□□ -2.17
VPS4B-203ENST00000588323 CLPSP04118 112 aa1.5□□□□□ -2.17
VPS4B-203ENST00000588323 IGKV4-1P06312 121 aa1.5□□□□□ -2.17
VPS4B-203ENST00000588323 COX6CP09669 75 aa1.5□□□□□ -2.17
VPS4B-203ENST00000588323 GCHFRP30047 84 aa1.5□□□□□ -2.17
VPS4B-203ENST00000588323 ERHP84090 104 aaKnown RBP1.5□□□□□ -2.17
VPS4B-203ENST00000588323 Q6ZQT0 140 aa1.5□□□□□ -2.17
VPS4B-203ENST00000588323 CLECL1Q8IZS7 167 aa1.5□□□□□ -2.17
VPS4B-203ENST00000588323 FAM19A2Q8N3H0 131 aa1.5□□□□□ -2.17
VPS4B-203ENST00000588323 DEFB108BQ8NET1 73 aa1.5□□□□□ -2.17
VPS4B-203ENST00000588323 Q9BRP9 147 aa1.5□□□□□ -2.17
VPS4B-203ENST00000588323 LIMD2Q9BT23 127 aa1.5□□□□□ -2.17
VPS4B-203ENST00000588323 NCKAP5O14513 1909 aa1.5□□□□□ -2.17
VPS4B-203ENST00000588323 HEATR5BQ9P2D3 2071 aa1.49□□□□□ -2.17
VPS4B-203ENST00000588323 EXPH5Q8NEV8 1989 aa1.49□□□□□ -2.17
VPS4B-203ENST00000588323 TMSB15BA0A087X1C1 80 aa1.49□□□□□ -2.17
VPS4B-203ENST00000588323 MYMXA0A1B0GTQ4 84 aa1.49□□□□□ -2.17
VPS4B-203ENST00000588323 IQCF6A8MYZ5 107 aa1.49□□□□□ -2.17
VPS4B-203ENST00000588323 ERC2-IT1O76042 136 aa1.49□□□□□ -2.17
VPS4B-203ENST00000588323 LEPROTL1O95214 131 aa1.49□□□□□ -2.17
VPS4B-203ENST00000588323 TFF1P04155 84 aa1.49□□□□□ -2.17
VPS4B-203ENST00000588323 HMGN2P05204 90 aaKnown RBP1.49□□□□□ -2.17
VPS4B-203ENST00000588323 BAALC-AS2P0C853 105 aa1.49□□□□□ -2.17
VPS4B-203ENST00000588323 PLGLAQ15195 96 aa1.49□□□□□ -2.17
VPS4B-203ENST00000588323 C2orf82Q6UX34 121 aa1.49□□□□□ -2.17
VPS4B-203ENST00000588323 C20orf197Q8N268 126 aa1.49□□□□□ -2.17
VPS4B-203ENST00000588323 MUC4Q99102 2169 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 IGKV1D-42A0A075B6H8 117 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 TRBV7-3A0A075B6L6 115 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 TRAV23DV6A0A075B6W5 121 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 IGLV3-32A0A0A0MS00 114 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 TRBV7-1A0A0A6YYK4 115 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 TRAV10A0A0B4J240 114 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 TMEM30CPA0ZSE6 113 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 E7EUB6 86 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 LYNX1G3V0Z9 82 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 IGLV1-51P01701 117 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 LYNX1P0DP58 116 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 ROMO1P60602 79 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 MIR22HGQ0VDD5 57 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 ATXN8Q156A1 80 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 NNATQ16517 81 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 DEFB112Q30KQ8 113 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 HCP5Q6MZN7 132 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 ZNF826PQ6ZT77 177 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 NDUFA11Q86Y39 141 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 FAM223AQ8IWN6 122 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 Q8N6K4 173 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 IFI27L1Q96BM0 104 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 PRO2289Q9P1D8 64 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 SCN3AQ9NY46 2000 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 DNAH10Q8IVF4 4471 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 HUWE1Q7Z6Z7 4374 aaKnown RBP1.48□□□□□ -2.17
VPS4B-203ENST00000588323 PKHD1P08F94 4074 aa1.48□□□□□ -2.17
VPS4B-203ENST00000588323 TRBV25-1A0A075B6N4 114 aa1.47□□□□□ -2.17
VPS4B-203ENST00000588323 TRAV12-3A0A0B4J271 114 aa1.47□□□□□ -2.17
VPS4B-203ENST00000588323 TRAV22A0A0B4J277 110 aa1.47□□□□□ -2.17
VPS4B-203ENST00000588323 TEX49A0A1B0GTD5 131 aa1.47□□□□□ -2.17
VPS4B-203ENST00000588323 TMEM14DPA8MWL7 114 aa1.47□□□□□ -2.17
VPS4B-203ENST00000588323 D6R8Y8 96 aa1.47□□□□□ -2.17
VPS4B-203ENST00000588323 F8WEM9 126 aa1.47□□□□□ -2.17
VPS4B-203ENST00000588323 H7BZZ5 65 aa1.47□□□□□ -2.17
VPS4B-203ENST00000588323 IFI27P40305 119 aaPredicted RBP1.47□□□□□ -2.17
VPS4B-203ENST00000588323 KLKP1Q107X0 134 aa1.47□□□□□ -2.17
VPS4B-203ENST00000588323 LYPD5Q6UWN5 251 aa1.47□□□□□ -2.17
VPS4B-203ENST00000588323 MUSTN1Q8IVN3 82 aa1.47□□□□□ -2.17
VPS4B-203ENST00000588323 LINC01600Q96MT4 127 aa1.47□□□□□ -2.17
VPS4B-203ENST00000588323 CDC42SE1Q9NRR8 79 aa1.47□□□□□ -2.17
VPS4B-203ENST00000588323 RNF213Q63HN8 5207 aa1.47□□□□□ -2.17
VPS4B-203ENST00000588323 HMCN2Q8NDA2 5059 aa1.46□□□□□ -2.18
VPS4B-203ENST00000588323 DNAL4O96015 105 aa1.46□□□□□ -2.18
VPS4B-203ENST00000588323 FCER1GP30273 86 aa1.46□□□□□ -2.18
VPS4B-203ENST00000588323 Q6ZTI0 123 aa1.46□□□□□ -2.18
VPS4B-203ENST00000588323 VMO1Q7Z5L0 202 aa1.46□□□□□ -2.18
VPS4B-203ENST00000588323 FAM167A-AS1Q96KT0 104 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms