RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 TMEM126AQ9H061 195 aa7.11□□□□□ -1.27
VMP1-207ENST00000588131 RPL37AP8A6NKH3 93 aa7.1□□□□□ -1.27
VMP1-207ENST00000588131 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.1□□□□□ -1.27
VMP1-207ENST00000588131 FAM229AH3BQW9 127 aa7.1□□□□□ -1.27
VMP1-207ENST00000588131 H3BUT2 72 aa7.1□□□□□ -1.27
VMP1-207ENST00000588131 LBHQ53QV2 105 aaPredicted RBP7.1□□□□□ -1.27
VMP1-207ENST00000588131 KRTAP9-2Q9BYQ4 174 aa7.1□□□□□ -1.27
VMP1-207ENST00000588131 PLAC8Q9NZF1 115 aa7.1□□□□□ -1.27
VMP1-207ENST00000588131 LRP1BQ9NZR2 4599 aa7.1□□□□□ -1.27
VMP1-207ENST00000588131 IGLV1-50A0A075B6I6 118 aa7.09□□□□□ -1.27
VMP1-207ENST00000588131 KRTAP11-1Q8IUC1 163 aa7.09□□□□□ -1.27
VMP1-207ENST00000588131 TRAV23DV6A0A075B6W5 121 aa7.08□□□□□ -1.28
VMP1-207ENST00000588131 TRIAP1O43715 76 aa7.08□□□□□ -1.28
VMP1-207ENST00000588131 RPL28P46779 137 aaKnown RBP7.08□□□□□ -1.28
VMP1-207ENST00000588131 HAMPP81172 84 aa7.08□□□□□ -1.28
VMP1-207ENST00000588131 RYR1P21817 5038 aa7.08□□□□□ -1.28
VMP1-207ENST00000588131 PSMB2P49721 201 aa7.07□□□□□ -1.28
VMP1-207ENST00000588131 SCXQ7RTU7 201 aa7.07□□□□□ -1.28
VMP1-207ENST00000588131 CIRBP-AS1Q8TBR5 109 aa7.07□□□□□ -1.28
VMP1-207ENST00000588131 KRTAP9-6A0A140TA67 174 aa7.06□□□□□ -1.28
VMP1-207ENST00000588131 KCNQ1DNQ9H478 68 aa7.06□□□□□ -1.28
VMP1-207ENST00000588131 PKHD1P08F94 4074 aa7.06□□□□□ -1.28
VMP1-207ENST00000588131 A0A1W2PPM0 123 aa7.05□□□□□ -1.28
VMP1-207ENST00000588131 PRYO14603 147 aa7.05□□□□□ -1.28
VMP1-207ENST00000588131 UBE2BP63146 152 aa7.05□□□□□ -1.28
VMP1-207ENST00000588131 C6orf99Q4VX62 202 aa7.05□□□□□ -1.28
VMP1-207ENST00000588131 ZNF73O43830 326 aaPredicted RBP7.04□□□□□ -1.28
VMP1-207ENST00000588131 DIRC1Q969H9 104 aa7.04□□□□□ -1.28
VMP1-207ENST00000588131 HERC2O95714 4834 aa7.03□□□□□ -1.28
VMP1-207ENST00000588131 A0A1B0GV90 55 aa7.03□□□□□ -1.28
VMP1-207ENST00000588131 SPRR1AP35321 89 aa7.03□□□□□ -1.28
VMP1-207ENST00000588131 APOBP04114 4563 aaKnown RBP7.03□□□□□ -1.28
VMP1-207ENST00000588131 KRTAP4-16G5E9R7 235 aaPredicted RBP7.02□□□□□ -1.29
VMP1-207ENST00000588131 SCGB1C2P0DMR2 95 aa7.02□□□□□ -1.29
VMP1-207ENST00000588131 REG3GQ6UW15 175 aa7.02□□□□□ -1.29
VMP1-207ENST00000588131 CLEC2BQ92478 149 aa7.02□□□□□ -1.29
VMP1-207ENST00000588131 CBY1Q9Y3M2 126 aa7.02□□□□□ -1.29
VMP1-207ENST00000588131 TCL1BO95988 128 aa7.01□□□□□ -1.29
VMP1-207ENST00000588131 COX6CP09669 75 aa7.01□□□□□ -1.29
VMP1-207ENST00000588131 FABP2P12104 132 aa7.01□□□□□ -1.29
VMP1-207ENST00000588131 FAM218AQ96MZ4 157 aa7.01□□□□□ -1.29
VMP1-207ENST00000588131 COX7BP24311 80 aa7□□□□□ -1.29
VMP1-207ENST00000588131 XGP55808 180 aa7□□□□□ -1.29
VMP1-207ENST00000588131 ELOF1P60002 83 aaKnown RBP7□□□□□ -1.29
VMP1-207ENST00000588131 TRBV7-6A0A0J9YX20 115 aa6.99□□□□□ -1.29
VMP1-207ENST00000588131 ETDCA0A1B0GVM5 59 aa6.99□□□□□ -1.29
VMP1-207ENST00000588131 B5MCH6 92 aa6.99□□□□□ -1.29
VMP1-207ENST00000588131 H0YGX0 51 aa6.99□□□□□ -1.29
VMP1-207ENST00000588131 VAMP3Q15836 100 aa6.99□□□□□ -1.29
VMP1-207ENST00000588131 LYRM7Q5U5X0 104 aa6.99□□□□□ -1.29
VMP1-207ENST00000588131 PSORS1C2Q9UIG4 136 aa6.99□□□□□ -1.29
VMP1-207ENST00000588131 SPCS1Q9Y6A9 102 aa6.99□□□□□ -1.29
VMP1-207ENST00000588131 K7EP34 96 aa6.98□□□□□ -1.29
VMP1-207ENST00000588131 FAM19A1Q7Z5A9 133 aa6.98□□□□□ -1.29
VMP1-207ENST00000588131 LST1O00453 97 aa6.97□□□□□ -1.29
VMP1-207ENST00000588131 BCE1O60756 84 aa6.97□□□□□ -1.29
VMP1-207ENST00000588131 PRLHP81277 87 aa6.97□□□□□ -1.29
VMP1-207ENST00000588131 Q6ZRX8 168 aa6.97□□□□□ -1.29
VMP1-207ENST00000588131 TRBV20-1A0A075B6N2 111 aa6.96□□□□□ -1.3
VMP1-207ENST00000588131 GHRHP01286 108 aa6.96□□□□□ -1.3
VMP1-207ENST00000588131 ATXN8Q156A1 80 aa6.96□□□□□ -1.3
VMP1-207ENST00000588131 LINC00575Q6W349 94 aa6.96□□□□□ -1.3
VMP1-207ENST00000588131 Q9BRP9 147 aa6.96□□□□□ -1.3
VMP1-207ENST00000588131 C1orf137Q5JT78 98 aa6.95□□□□□ -1.3
VMP1-207ENST00000588131 LCE3BQ5TA77 95 aa6.95□□□□□ -1.3
VMP1-207ENST00000588131 H3BMG7 143 aa6.94□□□□□ -1.3
VMP1-207ENST00000588131 KRTAP13-1Q8IUC0 172 aa6.94□□□□□ -1.3
VMP1-207ENST00000588131 SMCR5Q8TEV8 140 aa6.94□□□□□ -1.3
VMP1-207ENST00000588131 hADV29S1A0JD25 119 aa6.93□□□□□ -1.3
VMP1-207ENST00000588131 TRACP01848 142 aa6.93□□□□□ -1.3
VMP1-207ENST00000588131 SMR3BP02814 79 aaPredicted RBP6.93□□□□□ -1.3
VMP1-207ENST00000588131 UBE2AP49459 152 aa6.93□□□□□ -1.3
VMP1-207ENST00000588131 GTF2H5Q6ZYL4 71 aa6.93□□□□□ -1.3
VMP1-207ENST00000588131 A0A1B0GX51 115 aa6.92□□□□□ -1.3
VMP1-207ENST00000588131 H0Y9J4 135 aa6.92□□□□□ -1.3
VMP1-207ENST00000588131 ERC2-IT1O76042 136 aa6.92□□□□□ -1.3
VMP1-207ENST00000588131 INAFM2P0DMQ5 153 aa6.92□□□□□ -1.3
VMP1-207ENST00000588131 MTURNQ8N3F0 131 aa6.92□□□□□ -1.3
VMP1-207ENST00000588131 SLC25A20O43772 301 aa6.91□□□□□ -1.3
VMP1-207ENST00000588131 IGLV7-43P04211 117 aa6.91□□□□□ -1.3
VMP1-207ENST00000588131 HIGD2AQ9BW72 106 aa6.91□□□□□ -1.3
VMP1-207ENST00000588131 DHRS4-AS1Q9P1J3 65 aa6.91□□□□□ -1.3
VMP1-207ENST00000588131 C9JAW5 83 aa6.9□□□□□ -1.3
VMP1-207ENST00000588131 UBE2V1Q13404 147 aa6.9□□□□□ -1.3
VMP1-207ENST00000588131 Q6ZQY7 126 aa6.9□□□□□ -1.3
VMP1-207ENST00000588131 ZNF861PO60384 105 aa6.89□□□□□ -1.31
VMP1-207ENST00000588131 CDK2AP2O75956 126 aa6.89□□□□□ -1.31
VMP1-207ENST00000588131 DNAL4O96015 105 aa6.89□□□□□ -1.31
VMP1-207ENST00000588131 RPL37AP61513 92 aaKnown RBP6.89□□□□□ -1.31
VMP1-207ENST00000588131 ST20-AS1Q8NBB2 130 aa6.89□□□□□ -1.31
VMP1-207ENST00000588131 PRO0461Q9UI25 63 aa6.89□□□□□ -1.31
VMP1-207ENST00000588131 HSPG2P98160 4391 aa6.89□□□□□ -1.31
VMP1-207ENST00000588131 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.88□□□□□ -1.31
VMP1-207ENST00000588131 FAT1Q14517 4588 aa6.87□□□□□ -1.31
VMP1-207ENST00000588131 SNCGO76070 127 aa6.87□□□□□ -1.31
VMP1-207ENST00000588131 LINC01547P58512 204 aaPredicted RBP6.86□□□□□ -1.31
VMP1-207ENST00000588131 KRTAP10-4P60372 401 aaPredicted RBP6.86□□□□□ -1.31
VMP1-207ENST00000588131 ORMDL1Q9P0S3 153 aa6.86□□□□□ -1.31
VMP1-207ENST00000588131 BAALC-AS2P0C853 105 aa6.85□□□□□ -1.31
VMP1-207ENST00000588131 DEFB105AQ8NG35 78 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms