RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 A0A1W2PNN7 141 aa5.17□□□□□ -1.58
SDF2-204ENST00000587338 A6NDN8 102 aa5.17□□□□□ -1.58
SDF2-204ENST00000587338 SNHG12Q9BXW3 62 aa5.17□□□□□ -1.58
SDF2-204ENST00000587338 NHP2Q9NX24 153 aaKnown RBP5.17□□□□□ -1.58
SDF2-204ENST00000587338 LOC107984640A0A0U1RRK4 108 aa5.16□□□□□ -1.58
SDF2-204ENST00000587338 A4D1N5 150 aa5.16□□□□□ -1.58
SDF2-204ENST00000587338 NDUFC2-KCTD14E9PQ53 114 aa5.16□□□□□ -1.58
SDF2-204ENST00000587338 H0Y9J4 135 aa5.16□□□□□ -1.58
SDF2-204ENST00000587338 RNF151Q2KHN1 245 aa5.16□□□□□ -1.58
SDF2-204ENST00000587338 SOSTDC1Q6X4U4 206 aa5.16□□□□□ -1.58
SDF2-204ENST00000587338 PHF5AQ7RTV0 110 aaKnown RBP5.16□□□□□ -1.58
SDF2-204ENST00000587338 RAB37Q96AX2 223 aa5.16□□□□□ -1.58
SDF2-204ENST00000587338 SND1-IT1Q9HBX3 110 aa5.16□□□□□ -1.58
SDF2-204ENST00000587338 XAGE1AQ9HD64 81 aa5.16□□□□□ -1.58
SDF2-204ENST00000587338 IGLV1-50A0A075B6I6 118 aa5.15□□□□□ -1.59
SDF2-204ENST00000587338 EIF4EBP3O60516 100 aaPredicted RBP5.15□□□□□ -1.59
SDF2-204ENST00000587338 IGLV7-43P04211 117 aa5.15□□□□□ -1.59
SDF2-204ENST00000587338 K7ERJ3 54 aa5.14□□□□□ -1.59
SDF2-204ENST00000587338 H7C2G1 150 aa5.13□□□□□ -1.59
SDF2-204ENST00000587338 KRTAP1-4P0C5Y4 121 aa5.13□□□□□ -1.59
SDF2-204ENST00000587338 TLX1NBP0CAT3 122 aa5.13□□□□□ -1.59
SDF2-204ENST00000587338 CFC1BP0CG36 223 aa5.13□□□□□ -1.59
SDF2-204ENST00000587338 CFC1P0CG37 223 aa5.13□□□□□ -1.59
SDF2-204ENST00000587338 COL5A1-AS1Q5SY13 56 aa5.13□□□□□ -1.59
SDF2-204ENST00000587338 OR13C6PQ8NH95 151 aa5.13□□□□□ -1.59
SDF2-204ENST00000587338 NCR3O14931 201 aa5.12□□□□□ -1.59
SDF2-204ENST00000587338 TSPAN13O95857 204 aa5.12□□□□□ -1.59
SDF2-204ENST00000587338 RPL13AP40429 203 aaKnown RBP5.12□□□□□ -1.59
SDF2-204ENST00000587338 Q1RN00 199 aa5.12□□□□□ -1.59
SDF2-204ENST00000587338 A0A0B4J2C4 111 aa5.11□□□□□ -1.59
SDF2-204ENST00000587338 PRO1854Q9UHT4 67 aa5.11□□□□□ -1.59
SDF2-204ENST00000587338 TRAV13-2A0A0B4J235 113 aa5.1□□□□□ -1.59
SDF2-204ENST00000587338 NDUFC2O95298 119 aa5.1□□□□□ -1.59
SDF2-204ENST00000587338 S100A7L2Q5SY68 101 aa5.1□□□□□ -1.59
SDF2-204ENST00000587338 C9orf129Q5T035 196 aaKnown RBP5.1□□□□□ -1.59
SDF2-204ENST00000587338 FAM19A5Q7Z5A7 132 aaPredicted RBP5.1□□□□□ -1.59
SDF2-204ENST00000587338 KRTAP11-1Q8IUC1 163 aa5.1□□□□□ -1.59
SDF2-204ENST00000587338 NKAPP1Q8N9T2 125 aa5.1□□□□□ -1.59
SDF2-204ENST00000587338 KRTAP4-12Q9BQ66 201 aa5.1□□□□□ -1.59
SDF2-204ENST00000587338 NAA38Q9BRA0 125 aaKnown RBP5.1□□□□□ -1.59
SDF2-204ENST00000587338 PPDPFQ9H3Y8 114 aa5.1□□□□□ -1.59
SDF2-204ENST00000587338 LOC107984156A0A0G2JMH3 177 aa5.09□□□□□ -1.59
SDF2-204ENST00000587338 FAM168BA1KXE4 195 aa5.09□□□□□ -1.59
SDF2-204ENST00000587338 PSMB2P49721 201 aa5.09□□□□□ -1.59
SDF2-204ENST00000587338 ARL17AQ8IVW1 177 aa5.09□□□□□ -1.59
SDF2-204ENST00000587338 Q8NDZ9 215 aa5.09□□□□□ -1.59
SDF2-204ENST00000587338 KRTAP9-9Q9BYP9 154 aa5.09□□□□□ -1.59
SDF2-204ENST00000587338 KRTAP9-4Q9BYQ2 154 aa5.09□□□□□ -1.59
SDF2-204ENST00000587338 IGKV2-28A0A075B6P5 120 aa5.08□□□□□ -1.6
SDF2-204ENST00000587338 A0A1B0GWB2 263 aa5.08□□□□□ -1.6
SDF2-204ENST00000587338 GAGE10A6NGK3 116 aa5.08□□□□□ -1.6
SDF2-204ENST00000587338 H3BUT2 72 aa5.08□□□□□ -1.6
SDF2-204ENST00000587338 TAX1BP3O14907 124 aa5.08□□□□□ -1.6
SDF2-204ENST00000587338 IGKV2D-28P01615 120 aa5.08□□□□□ -1.6
SDF2-204ENST00000587338 VPREB1P12018 145 aa5.08□□□□□ -1.6
SDF2-204ENST00000587338 LBHQ53QV2 105 aaPredicted RBP5.08□□□□□ -1.6
SDF2-204ENST00000587338 LINC00337Q8N6G1 96 aa5.08□□□□□ -1.6
SDF2-204ENST00000587338 CRCT1Q9UGL9 99 aa5.08□□□□□ -1.6
SDF2-204ENST00000587338 C9orf118A6NHY6 69 aa5.07□□□□□ -1.6
SDF2-204ENST00000587338 M0R378 163 aa5.07□□□□□ -1.6
SDF2-204ENST00000587338 SCGB1C2P0DMR2 95 aa5.07□□□□□ -1.6
SDF2-204ENST00000587338 UBE2BP63146 152 aa5.07□□□□□ -1.6
SDF2-204ENST00000587338 TRBV10-2A0A0K0K1G8 114 aa5.06□□□□□ -1.6
SDF2-204ENST00000587338 TMEM126AQ9H061 195 aa5.06□□□□□ -1.6
SDF2-204ENST00000587338 C22orf24Q9Y442 160 aa5.06□□□□□ -1.6
SDF2-204ENST00000587338 KRTAP4-8A0A0G2JLE6 195 aa5.05□□□□□ -1.6
SDF2-204ENST00000587338 TRBV10-3A0A0K0K1G6 114 aa5.05□□□□□ -1.6
SDF2-204ENST00000587338 RPL37AP8A6NKH3 93 aa5.05□□□□□ -1.6
SDF2-204ENST00000587338 M0QXV9 152 aa5.05□□□□□ -1.6
SDF2-204ENST00000587338 SMIM11BQ8TCY0 68 aa5.05□□□□□ -1.6
SDF2-204ENST00000587338 A0A1B0GV90 55 aa5.04□□□□□ -1.6
SDF2-204ENST00000587338 COX6CP09669 75 aa5.04□□□□□ -1.6
SDF2-204ENST00000587338 VAMP3Q15836 100 aa5.04□□□□□ -1.6
SDF2-204ENST00000587338 MRPL55Q7Z7F7 128 aaKnown RBP5.04□□□□□ -1.6
SDF2-204ENST00000587338 LINC00167Q96N53 147 aa5.04□□□□□ -1.6
SDF2-204ENST00000587338 RETNLBQ9BQ08 111 aa5.04□□□□□ -1.6
SDF2-204ENST00000587338 CDIP1Q9H305 208 aa5.04□□□□□ -1.6
SDF2-204ENST00000587338 IGLV5-37A0A075B6J1 123 aa5.03□□□□□ -1.6
SDF2-204ENST00000587338 TRAV23DV6A0A075B6W5 121 aa5.03□□□□□ -1.6
SDF2-204ENST00000587338 A0A1W2PPM0 123 aa5.03□□□□□ -1.6
SDF2-204ENST00000587338 TRIAP1O43715 76 aa5.03□□□□□ -1.6
SDF2-204ENST00000587338 FABP2P12104 132 aa5.03□□□□□ -1.6
SDF2-204ENST00000587338 LYRM7Q5U5X0 104 aa5.03□□□□□ -1.6
SDF2-204ENST00000587338 KRTAP7-1Q8IUC3 87 aa5.03□□□□□ -1.6
SDF2-204ENST00000587338 CBY1Q9Y3M2 126 aa5.03□□□□□ -1.6
SDF2-204ENST00000587338 IGLV6-57P01721 117 aa5.02□□□□□ -1.61
SDF2-204ENST00000587338 C6orf99Q4VX62 202 aa5.02□□□□□ -1.61
SDF2-204ENST00000587338 MUC17Q685J3 4493 aa5.01□□□□□ -1.61
SDF2-204ENST00000587338 A0A087X002 238 aa5.01□□□□□ -1.61
SDF2-204ENST00000587338 RPL28P46779 137 aaKnown RBP5.01□□□□□ -1.61
SDF2-204ENST00000587338 TYMSOSQ8TAI1 123 aa5.01□□□□□ -1.61
SDF2-204ENST00000587338 SPCS1Q9Y6A9 102 aa5.01□□□□□ -1.61
SDF2-204ENST00000587338 ZNF73O43830 326 aaPredicted RBP5□□□□□ -1.61
SDF2-204ENST00000587338 ZNF861PO60384 105 aa5□□□□□ -1.61
SDF2-204ENST00000587338 CRYGAP11844 174 aa5□□□□□ -1.61
SDF2-204ENST00000587338 LINC01547P58512 204 aaPredicted RBP5□□□□□ -1.61
SDF2-204ENST00000587338 TPRXLQ17RH7 258 aa5□□□□□ -1.61
SDF2-204ENST00000587338 CLEC2BQ92478 149 aa5□□□□□ -1.61
SDF2-204ENST00000587338 ETDCA0A1B0GVM5 59 aa4.99□□□□□ -1.61
SDF2-204ENST00000587338 H0YGX0 51 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms