RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 LOC107984156A0A0G2JMH3 177 aa6.79□□□□□ -1.32
LIG3-207ENST00000586119 GAGE10A6NGK3 116 aa6.79□□□□□ -1.32
LIG3-207ENST00000586119 K7ERU9 68 aa6.79□□□□□ -1.32
LIG3-207ENST00000586119 BCE1O60756 84 aa6.79□□□□□ -1.32
LIG3-207ENST00000586119 RPL24P83731 157 aaKnown RBP6.79□□□□□ -1.32
LIG3-207ENST00000586119 MRPL55Q7Z7F7 128 aaKnown RBP6.79□□□□□ -1.32
LIG3-207ENST00000586119 PCP2Q8IVA1 136 aa6.79□□□□□ -1.32
LIG3-207ENST00000586119 ARL17AQ8IVW1 177 aa6.79□□□□□ -1.32
LIG3-207ENST00000586119 MIR7-3HGQ8N6C7 128 aa6.79□□□□□ -1.32
LIG3-207ENST00000586119 TTTY13Q9BZ97 58 aa6.79□□□□□ -1.32
LIG3-207ENST00000586119 IGLV5-37A0A075B6J1 123 aa6.78□□□□□ -1.32
LIG3-207ENST00000586119 A0A0U1RRA0 63 aa6.78□□□□□ -1.32
LIG3-207ENST00000586119 C9orf118A6NHY6 69 aa6.78□□□□□ -1.32
LIG3-207ENST00000586119 CRYGAP11844 174 aa6.78□□□□□ -1.32
LIG3-207ENST00000586119 SCGB1D4Q6XE38 83 aa6.78□□□□□ -1.32
LIG3-207ENST00000586119 TP73-AS1Q9UF72 201 aa6.78□□□□□ -1.32
LIG3-207ENST00000586119 TMEM238C9JI98 176 aa6.77□□□□□ -1.33
LIG3-207ENST00000586119 RPL28P46779 137 aaKnown RBP6.77□□□□□ -1.33
LIG3-207ENST00000586119 TAL2Q16559 108 aa6.77□□□□□ -1.33
LIG3-207ENST00000586119 Q6ZVH6 145 aa6.77□□□□□ -1.33
LIG3-207ENST00000586119 LITAFQ99732 161 aa6.77□□□□□ -1.33
LIG3-207ENST00000586119 A0A0U1RQV1 116 aa6.76□□□□□ -1.33
LIG3-207ENST00000586119 COPS9Q8WXC6 57 aa6.76□□□□□ -1.33
LIG3-207ENST00000586119 SPANXDQ9BXN6 97 aa6.76□□□□□ -1.33
LIG3-207ENST00000586119 PPDPFQ9H3Y8 114 aa6.76□□□□□ -1.33
LIG3-207ENST00000586119 SPANXCQ9NY87 97 aa6.76□□□□□ -1.33
LIG3-207ENST00000586119 PCP4P48539 62 aa6.75□□□□□ -1.33
LIG3-207ENST00000586119 ADAMTSL4-AS1Q5T5F5 129 aa6.75□□□□□ -1.33
LIG3-207ENST00000586119 KRTAP13-1Q8IUC0 172 aa6.75□□□□□ -1.33
LIG3-207ENST00000586119 K7EP34 96 aa6.74□□□□□ -1.33
LIG3-207ENST00000586119 NDUFC2O95298 119 aa6.74□□□□□ -1.33
LIG3-207ENST00000586119 VPREB1P12018 145 aa6.74□□□□□ -1.33
LIG3-207ENST00000586119 IFITM1P13164 125 aa6.74□□□□□ -1.33
LIG3-207ENST00000586119 OCIAD2Q56VL3 154 aa6.74□□□□□ -1.33
LIG3-207ENST00000586119 DAND5Q8N907 189 aa6.74□□□□□ -1.33
LIG3-207ENST00000586119 NKAPP1Q8N9T2 125 aa6.74□□□□□ -1.33
LIG3-207ENST00000586119 SPANXB1Q9NS25 103 aaPredicted RBP6.74□□□□□ -1.33
LIG3-207ENST00000586119 LINC00308Q8TCZ7 52 aa6.73□□□□□ -1.33
LIG3-207ENST00000586119 TRBV10-2A0A0K0K1G8 114 aa6.72□□□□□ -1.33
LIG3-207ENST00000586119 FABP2P12104 132 aa6.72□□□□□ -1.33
LIG3-207ENST00000586119 KRTAP9-6A0A140TA67 174 aa6.71□□□□□ -1.34
LIG3-207ENST00000586119 A0A1W2PPM0 123 aa6.71□□□□□ -1.34
LIG3-207ENST00000586119 M0R378 163 aa6.71□□□□□ -1.34
LIG3-207ENST00000586119 UBE2AP49459 152 aa6.71□□□□□ -1.34
LIG3-207ENST00000586119 SOSTDC1Q6X4U4 206 aa6.71□□□□□ -1.34
LIG3-207ENST00000586119 LINC00304Q8N9R0 145 aa6.71□□□□□ -1.34
LIG3-207ENST00000586119 IGKV2-28A0A075B6P5 120 aa6.7□□□□□ -1.34
LIG3-207ENST00000586119 IGKV2D-28P01615 120 aa6.7□□□□□ -1.34
LIG3-207ENST00000586119 PRLHP81277 87 aa6.7□□□□□ -1.34
LIG3-207ENST00000586119 IGLV7-46A0A075B6I9 117 aa6.69□□□□□ -1.34
LIG3-207ENST00000586119 H3BUT2 72 aa6.69□□□□□ -1.34
LIG3-207ENST00000586119 NPC2P61916 151 aa6.69□□□□□ -1.34
LIG3-207ENST00000586119 CEND1Q8N111 149 aa6.69□□□□□ -1.34
LIG3-207ENST00000586119 C3orf22Q8N5N4 141 aa6.69□□□□□ -1.34
LIG3-207ENST00000586119 Q8NDZ9 215 aa6.69□□□□□ -1.34
LIG3-207ENST00000586119 VPS25Q9BRG1 176 aa6.69□□□□□ -1.34
LIG3-207ENST00000586119 CDIP1Q9H305 208 aa6.69□□□□□ -1.34
LIG3-207ENST00000586119 SPCS1Q9Y6A9 102 aa6.69□□□□□ -1.34
LIG3-207ENST00000586119 FAM229BQ4G0N7 80 aa6.68□□□□□ -1.34
LIG3-207ENST00000586119 MUSTN1Q8IVN3 82 aa6.68□□□□□ -1.34
LIG3-207ENST00000586119 EIF4EBP3O60516 100 aaPredicted RBP6.67□□□□□ -1.34
LIG3-207ENST00000586119 FAM19A1Q7Z5A9 133 aa6.67□□□□□ -1.34
LIG3-207ENST00000586119 HIST1H4GQ99525 98 aa6.67□□□□□ -1.34
LIG3-207ENST00000586119 TMEM238LA0A1B0GVL6 79 aa6.66□□□□□ -1.34
LIG3-207ENST00000586119 A0A1B0GWB2 263 aa6.66□□□□□ -1.34
LIG3-207ENST00000586119 A6NJY4 79 aa6.66□□□□□ -1.34
LIG3-207ENST00000586119 J3QR89 54 aa6.66□□□□□ -1.34
LIG3-207ENST00000586119 NCR3O14931 201 aa6.66□□□□□ -1.34
LIG3-207ENST00000586119 F8W1H4 67 aa6.65□□□□□ -1.34
LIG3-207ENST00000586119 TPRXLQ17RH7 258 aa6.65□□□□□ -1.34
LIG3-207ENST00000586119 S100A7L2Q5SY68 101 aa6.65□□□□□ -1.34
LIG3-207ENST00000586119 LYRM7Q5U5X0 104 aa6.65□□□□□ -1.34
LIG3-207ENST00000586119 TMEM126AQ9H061 195 aa6.65□□□□□ -1.34
LIG3-207ENST00000586119 PRYO14603 147 aa6.64□□□□□ -1.35
LIG3-207ENST00000586119 IGLV6-57P01721 117 aa6.64□□□□□ -1.35
LIG3-207ENST00000586119 FXYD2P54710 66 aa6.64□□□□□ -1.35
LIG3-207ENST00000586119 KCNQ1DNQ9H478 68 aa6.64□□□□□ -1.35
LIG3-207ENST00000586119 TRAV13-2A0A0B4J235 113 aa6.63□□□□□ -1.35
LIG3-207ENST00000586119 TRBV10-3A0A0K0K1G6 114 aa6.63□□□□□ -1.35
LIG3-207ENST00000586119 A4D1N5 150 aa6.62□□□□□ -1.35
LIG3-207ENST00000586119 SCGB1A1P11684 91 aa6.62□□□□□ -1.35
LIG3-207ENST00000586119 SPRR1AP35321 89 aa6.62□□□□□ -1.35
LIG3-207ENST00000586119 RAB37Q96AX2 223 aa6.62□□□□□ -1.35
LIG3-207ENST00000586119 KRTAP4-1Q9BYQ7 146 aa6.62□□□□□ -1.35
LIG3-207ENST00000586119 NHP2Q9NX24 153 aaKnown RBP6.62□□□□□ -1.35
LIG3-207ENST00000586119 LINC00337Q8N6G1 96 aa6.61□□□□□ -1.35
LIG3-207ENST00000586119 OR13C6PQ8NH95 151 aa6.61□□□□□ -1.35
LIG3-207ENST00000586119 TRAV23DV6A0A075B6W5 121 aa6.6□□□□□ -1.35
LIG3-207ENST00000586119 C21orf62-AS1Q17RA5 79 aa6.6□□□□□ -1.35
LIG3-207ENST00000586119 HIGD2AQ9BW72 106 aa6.6□□□□□ -1.35
LIG3-207ENST00000586119 ETDCA0A1B0GVM5 59 aa6.58□□□□□ -1.36
LIG3-207ENST00000586119 SPRR4Q96PI1 79 aa6.58□□□□□ -1.36
LIG3-207ENST00000586119 A0A0B4J2C4 111 aa6.57□□□□□ -1.36
LIG3-207ENST00000586119 KRTAP4-16G5E9R7 235 aaPredicted RBP6.57□□□□□ -1.36
LIG3-207ENST00000586119 ZNF73O43830 326 aaPredicted RBP6.57□□□□□ -1.36
LIG3-207ENST00000586119 TRBV20-1A0A075B6N2 111 aa6.56□□□□□ -1.36
LIG3-207ENST00000586119 CFC1BP0CG36 223 aa6.56□□□□□ -1.36
LIG3-207ENST00000586119 CFC1P0CG37 223 aa6.56□□□□□ -1.36
LIG3-207ENST00000586119 KRTAP13-3Q3SY46 172 aa6.56□□□□□ -1.36
LIG3-207ENST00000586119 TRBV7-6A0A0J9YX20 115 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms