RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 NBEAL1Q6ZS30 2694 aa-0.4□□□□□ -2.47
TTC39C-207ENST00000581394 CLTCQ00610 1675 aaKnown RBP-0.4□□□□□ -2.47
TTC39C-207ENST00000581394 MAP1AP78559 2803 aaPredicted RBP-0.41□□□□□ -2.47
TTC39C-207ENST00000581394 SPTY2D1-AS1A0A0U1RR47 76 aa-0.41□□□□□ -2.48
TTC39C-207ENST00000581394 LAMA1P25391 3075 aa-0.41□□□□□ -2.48
TTC39C-207ENST00000581394 SETD2Q9BYW2 2564 aaPredicted RBP-0.41□□□□□ -2.48
TTC39C-207ENST00000581394 KNL1Q8NG31 2342 aa-0.41□□□□□ -2.48
TTC39C-207ENST00000581394 WDR87Q6ZQQ6 2873 aa-0.41□□□□□ -2.48
TTC39C-207ENST00000581394 CREBBPQ92793 2442 aa-0.42□□□□□ -2.48
TTC39C-207ENST00000581394 ANKRD36A6QL64 1941 aa-0.42□□□□□ -2.48
TTC39C-207ENST00000581394 DNAH9Q9NYC9 4486 aa-0.42□□□□□ -2.48
TTC39C-207ENST00000581394 KRTAP19-8Q3LI54 63 aa-0.42□□□□□ -2.48
TTC39C-207ENST00000581394 DSPP15924 2871 aaKnown RBP-0.42□□□□□ -2.48
TTC39C-207ENST00000581394 UBR1Q8IWV7 1749 aa-0.42□□□□□ -2.48
TTC39C-207ENST00000581394 ATP7BP35670 1465 aa-0.42□□□□□ -2.48
TTC39C-207ENST00000581394 BPTFQ12830 3046 aa-0.43□□□□□ -2.48
TTC39C-207ENST00000581394 CRYBG1Q9Y4K1 1723 aa-0.43□□□□□ -2.48
TTC39C-207ENST00000581394 CLIP1P30622 1438 aa-0.43□□□□□ -2.48
TTC39C-207ENST00000581394 LAMA3Q16787 3333 aa-0.43□□□□□ -2.48
TTC39C-207ENST00000581394 IQCF6A8MYZ5 107 aa-0.43□□□□□ -2.48
TTC39C-207ENST00000581394 COX7BP24311 80 aa-0.43□□□□□ -2.48
TTC39C-207ENST00000581394 AKAP12Q02952 1782 aa-0.43□□□□□ -2.48
TTC39C-207ENST00000581394 CUBNO60494 3623 aa-0.44□□□□□ -2.48
TTC39C-207ENST00000581394 MYO3AQ8NEV4 1616 aa-0.44□□□□□ -2.48
TTC39C-207ENST00000581394 ALKQ9UM73 1620 aa-0.44□□□□□ -2.48
TTC39C-207ENST00000581394 K7EP34 96 aa-0.44□□□□□ -2.48
TTC39C-207ENST00000581394 CCL22O00626 93 aa-0.44□□□□□ -2.48
TTC39C-207ENST00000581394 DEFB135Q30KP9 77 aa-0.44□□□□□ -2.48
TTC39C-207ENST00000581394 PYY3Q5JQD4 70 aa-0.44□□□□□ -2.48
TTC39C-207ENST00000581394 WFDC13Q8IUB5 93 aa-0.44□□□□□ -2.48
TTC39C-207ENST00000581394 C9orf62Q8N4C0 152 aa-0.44□□□□□ -2.48
TTC39C-207ENST00000581394 NF1P21359 2839 aa-0.44□□□□□ -2.48
TTC39C-207ENST00000581394 RGPD1P0DJD0 1748 aa-0.44□□□□□ -2.48
TTC39C-207ENST00000581394 USP32Q8NFA0 1604 aa-0.45□□□□□ -2.48
TTC39C-207ENST00000581394 SPRR2AP35326 72 aa-0.45□□□□□ -2.48
TTC39C-207ENST00000581394 MUC17Q685J3 4493 aa-0.45□□□□□ -2.48
TTC39C-207ENST00000581394 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.45□□□□□ -2.48
TTC39C-207ENST00000581394 LRRC7Q96NW7 1537 aa-0.46□□□□□ -2.48
TTC39C-207ENST00000581394 A0A1B0GUT8 65 aa-0.46□□□□□ -2.48
TTC39C-207ENST00000581394 PEA15Q15121 130 aa-0.46□□□□□ -2.48
TTC39C-207ENST00000581394 TDRG1Q3Y452 100 aa-0.46□□□□□ -2.48
TTC39C-207ENST00000581394 HEPN1Q6WQI6 88 aa-0.46□□□□□ -2.48
TTC39C-207ENST00000581394 CDKN2A-AS1Q9UH64 79 aa-0.46□□□□□ -2.48
TTC39C-207ENST00000581394 AKAP13Q12802 2813 aa-0.46□□□□□ -2.48
TTC39C-207ENST00000581394 DYNC1H1Q14204 4646 aaKnown RBP-0.46□□□□□ -2.48
TTC39C-207ENST00000581394 TTC37Q6PGP7 1564 aa-0.46□□□□□ -2.48
TTC39C-207ENST00000581394 MYO15AQ9UKN7 3530 aa-0.46□□□□□ -2.48
TTC39C-207ENST00000581394 RGPD2P0DJD1 1756 aa-0.47□□□□□ -2.48
TTC39C-207ENST00000581394 MYMXA0A1B0GTQ4 84 aa-0.47□□□□□ -2.48
TTC39C-207ENST00000581394 PLGLAQ15195 96 aa-0.47□□□□□ -2.48
TTC39C-207ENST00000581394 KRTAP19-6Q3LI70 58 aa-0.47□□□□□ -2.48
TTC39C-207ENST00000581394 V9GYS6 101 aa-0.47□□□□□ -2.48
TTC39C-207ENST00000581394 ANKRD11Q6UB99 2663 aaPredicted RBP-0.47□□□□□ -2.48
TTC39C-207ENST00000581394 DNAH2Q9P225 4427 aa-0.47□□□□□ -2.49
TTC39C-207ENST00000581394 PLIN4Q96Q06 1357 aa-0.47□□□□□ -2.49
TTC39C-207ENST00000581394 ITPR1Q14643 2758 aa-0.47□□□□□ -2.49
TTC39C-207ENST00000581394 LYSTQ99698 3801 aa-0.47□□□□□ -2.49
TTC39C-207ENST00000581394 MYO18BQ8IUG5 2567 aa-0.48□□□□□ -2.49
TTC39C-207ENST00000581394 TNRC18O15417 2968 aaPredicted RBP-0.48□□□□□ -2.49
TTC39C-207ENST00000581394 APOBP04114 4563 aaKnown RBP-0.48□□□□□ -2.49
TTC39C-207ENST00000581394 MYH4Q9Y623 1939 aa-0.48□□□□□ -2.49
TTC39C-207ENST00000581394 PLECQ15149 4684 aaKnown RBP-0.48□□□□□ -2.49
TTC39C-207ENST00000581394 ADAMTS12P58397 1594 aa-0.48□□□□□ -2.49
TTC39C-207ENST00000581394 PTPN23Q9H3S7 1636 aa-0.48□□□□□ -2.49
TTC39C-207ENST00000581394 RIF1Q5UIP0 2472 aaKnown RBP-0.48□□□□□ -2.49
TTC39C-207ENST00000581394 TRAV21A0A0B4J279 112 aa-0.48□□□□□ -2.49
TTC39C-207ENST00000581394 SMIM11AP58511 58 aa-0.48□□□□□ -2.49
TTC39C-207ENST00000581394 USP9XQ93008 2570 aaPredicted RBP-0.49□□□□□ -2.49
TTC39C-207ENST00000581394 TMEM131LA2VDJ0 1609 aa-0.49□□□□□ -2.49
TTC39C-207ENST00000581394 ZNF831Q5JPB2 1677 aa-0.49□□□□□ -2.49
TTC39C-207ENST00000581394 QSER1Q2KHR3 1735 aa-0.49□□□□□ -2.49
TTC39C-207ENST00000581394 DNAH5Q8TE73 4624 aa-0.49□□□□□ -2.49
TTC39C-207ENST00000581394 NDUFA3O95167 84 aa-0.49□□□□□ -2.49
TTC39C-207ENST00000581394 S100A16Q96FQ6 103 aaKnown RBP-0.49□□□□□ -2.49
TTC39C-207ENST00000581394 GAFA1Q96PS6 74 aa-0.49□□□□□ -2.49
TTC39C-207ENST00000581394 USP9YO00507 2555 aaPredicted RBP-0.49□□□□□ -2.49
TTC39C-207ENST00000581394 SACSQ9NZJ4 4579 aa-0.49□□□□□ -2.49
TTC39C-207ENST00000581394 ITPR3Q14573 2671 aa-0.5□□□□□ -2.49
TTC39C-207ENST00000581394 NIPBLQ6KC79 2804 aaeCLIP-0.5□□□□□ -2.49
TTC39C-207ENST00000581394 TRANK1O15050 2925 aa-0.5□□□□□ -2.49
TTC39C-207ENST00000581394 SNRPFP62306 86 aaKnown RBP-0.5□□□□□ -2.49
TTC39C-207ENST00000581394 LINC00643Q86TS7 51 aa-0.5□□□□□ -2.49
TTC39C-207ENST00000581394 Q9H521 79 aa-0.5□□□□□ -2.49
TTC39C-207ENST00000581394 RABAC1Q9UI14 185 aa-0.5□□□□□ -2.49
TTC39C-207ENST00000581394 TEX15Q9BXT5 2789 aa-0.5□□□□□ -2.49
TTC39C-207ENST00000581394 DNAH6Q9C0G6 4158 aa-0.5□□□□□ -2.49
TTC39C-207ENST00000581394 ABCC3O15438 1527 aa-0.5□□□□□ -2.49
TTC39C-207ENST00000581394 CICQ96RK0 1608 aaPredicted RBP-0.5□□□□□ -2.49
TTC39C-207ENST00000581394 PREX1Q8TCU6 1659 aa-0.5□□□□□ -2.49
TTC39C-207ENST00000581394 NBASA2RRP1 2371 aa-0.5□□□□□ -2.49
TTC39C-207ENST00000581394 NBEAQ8NFP9 2946 aa-0.51□□□□□ -2.49
TTC39C-207ENST00000581394 CSMD2Q7Z408 3487 aa-0.51□□□□□ -2.49
TTC39C-207ENST00000581394 DNAH1Q9P2D7 4330 aa-0.51□□□□□ -2.49
TTC39C-207ENST00000581394 ANK3Q12955 4377 aaKnown RBP-0.51□□□□□ -2.49
TTC39C-207ENST00000581394 PVALEFA0A1B0GWK0 134 aa-0.51□□□□□ -2.49
TTC39C-207ENST00000581394 SPRR2EP22531 72 aa-0.51□□□□□ -2.49
TTC39C-207ENST00000581394 ITPR2Q14571 2701 aa-0.51□□□□□ -2.49
TTC39C-207ENST00000581394 COX6B2Q6YFQ2 88 aa-0.51□□□□□ -2.49
TTC39C-207ENST00000581394 LRRC9Q6ZRR7 1453 aa-0.51□□□□□ -2.49
TTC39C-207ENST00000581394 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms