RNA–Protein interactions for RNA: ENST00000580542.5

ITGB4-207, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-207ENST00000580542 C9orf116Q5BN46 136 aaPredicted RBP9.23□□□□□ -0.93
ITGB4-207ENST00000580542 Q8NDZ9 215 aa9.23□□□□□ -0.93
ITGB4-207ENST00000580542 TRGV4A0A0C4DH28 118 aa9.22□□□□□ -0.93
ITGB4-207ENST00000580542 M0R378 163 aa9.22□□□□□ -0.93
ITGB4-207ENST00000580542 PSCAO43653 123 aa9.22□□□□□ -0.93
ITGB4-207ENST00000580542 COX7BP24311 80 aa9.22□□□□□ -0.93
ITGB4-207ENST00000580542 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.22□□□□□ -0.93
ITGB4-207ENST00000580542 SMIM29Q86T20 159 aa9.22□□□□□ -0.93
ITGB4-207ENST00000580542 LINC00269Q8N2A0 174 aa9.22□□□□□ -0.93
ITGB4-207ENST00000580542 CHKB-CPT1BH3BT56 60 aa9.21□□□□□ -0.93
ITGB4-207ENST00000580542 CSNK1G2-AS1Q8NCQ2 148 aa9.21□□□□□ -0.93
ITGB4-207ENST00000580542 DNAH3Q8TD57 4116 aa9.21□□□□□ -0.94
ITGB4-207ENST00000580542 TRBV6-8A0A0A6YYG3 113 aa9.21□□□□□ -0.94
ITGB4-207ENST00000580542 MAST4O15021 2626 aa9.2□□□□□ -0.94
ITGB4-207ENST00000580542 UBE2AP49459 152 aa9.2□□□□□ -0.94
ITGB4-207ENST00000580542 CLPSL2Q6UWE3 100 aa9.2□□□□□ -0.94
ITGB4-207ENST00000580542 COX17Q14061 63 aa9.2□□□□□ -0.94
ITGB4-207ENST00000580542 C10orf25Q5T742 122 aa9.2□□□□□ -0.94
ITGB4-207ENST00000580542 Q5VV11 94 aa9.2□□□□□ -0.94
ITGB4-207ENST00000580542 C11orf45Q8TAV5 145 aa9.2□□□□□ -0.94
ITGB4-207ENST00000580542 LINC00612Q8N6U2 182 aa9.19□□□□□ -0.94
ITGB4-207ENST00000580542 DIRC1Q969H9 104 aa9.18□□□□□ -0.94
ITGB4-207ENST00000580542 C16orf90A8MZG2 172 aa9.18□□□□□ -0.94
ITGB4-207ENST00000580542 APOC4P55056 127 aa9.18□□□□□ -0.94
ITGB4-207ENST00000580542 C3orf84H3BNL1 204 aa9.18□□□□□ -0.94
ITGB4-207ENST00000580542 KLK12Q9UKR0 248 aa9.17□□□□□ -0.94
ITGB4-207ENST00000580542 HIGD2BQ4VC39 106 aa9.17□□□□□ -0.94
ITGB4-207ENST00000580542 NDUFS5O43920 106 aa9.16□□□□□ -0.94
ITGB4-207ENST00000580542 HCG22E2RYF7 251 aa9.15□□□□□ -0.95
ITGB4-207ENST00000580542 CYP4F30PQ9H0H9 118 aa9.14□□□□□ -0.95
ITGB4-207ENST00000580542 IGLV6-57P01721 117 aa9.13□□□□□ -0.95
ITGB4-207ENST00000580542 LCE6AA0A183 80 aa9.12□□□□□ -0.95
ITGB4-207ENST00000580542 ZNF73O43830 326 aaPredicted RBP9.12□□□□□ -0.95
ITGB4-207ENST00000580542 ZCCHC13Q8WW36 166 aaKnown RBP9.12□□□□□ -0.95
ITGB4-207ENST00000580542 DEFB130BP0DP73 79 aa9.12□□□□□ -0.95
ITGB4-207ENST00000580542 DEFB130AP0DP74 79 aa9.12□□□□□ -0.95
ITGB4-207ENST00000580542 KIAA0087Q14695 138 aa9.12□□□□□ -0.95
ITGB4-207ENST00000580542 ATP11AUNQ6ZP68 121 aa9.12□□□□□ -0.95
ITGB4-207ENST00000580542 PRR15LQ9BU68 103 aa9.12□□□□□ -0.95
ITGB4-207ENST00000580542 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.11□□□□□ -0.95
ITGB4-207ENST00000580542 GYPEP15421 78 aa9.1□□□□□ -0.95
ITGB4-207ENST00000580542 ETDCA0A1B0GVM5 59 aa9.1□□□□□ -0.95
ITGB4-207ENST00000580542 STAB1Q9NY15 2570 aa9.1□□□□□ -0.95
ITGB4-207ENST00000580542 IGHV4-28A0A0C4DH34 117 aa9.09□□□□□ -0.95
ITGB4-207ENST00000580542 IGLV10-54A0A075B6I4 117 aa9.09□□□□□ -0.95
ITGB4-207ENST00000580542 EGFEM1PQ0D2K5 195 aa9.09□□□□□ -0.95
ITGB4-207ENST00000580542 NBEAL2Q6ZNJ1 2754 aa9.09□□□□□ -0.95
ITGB4-207ENST00000580542 A6NED7 52 aa9.08□□□□□ -0.96
ITGB4-207ENST00000580542 PHF5AQ7RTV0 110 aaKnown RBP9.08□□□□□ -0.96
ITGB4-207ENST00000580542 LIMD2Q9BT23 127 aa9.08□□□□□ -0.96
ITGB4-207ENST00000580542 PKD1L1Q8TDX9 2849 aa9.07□□□□□ -0.96
ITGB4-207ENST00000580542 A0A1B0GUV1 79 aa9.07□□□□□ -0.96
ITGB4-207ENST00000580542 A0A096LPF7 62 aa9.07□□□□□ -0.96
ITGB4-207ENST00000580542 A6NN06 94 aa9.07□□□□□ -0.96
ITGB4-207ENST00000580542 LCA10Q71F78 164 aa9.07□□□□□ -0.96
ITGB4-207ENST00000580542 ST20-AS1Q8NBB2 130 aa9.07□□□□□ -0.96
ITGB4-207ENST00000580542 Q8N9P0 234 aaPredicted RBP9.06□□□□□ -0.96
ITGB4-207ENST00000580542 B9D2Q9BPU9 175 aa9.06□□□□□ -0.96
ITGB4-207ENST00000580542 NDUFB1O75438 58 aa9.06□□□□□ -0.96
ITGB4-207ENST00000580542 UNQ6190/PRO20217Q6UXQ8 127 aa9.06□□□□□ -0.96
ITGB4-207ENST00000580542 ELOF1P60002 83 aaKnown RBP9.05□□□□□ -0.96
ITGB4-207ENST00000580542 IGHV4-30-4P0DP06 118 aa9.05□□□□□ -0.96
ITGB4-207ENST00000580542 X6R8D5 127 aa9.05□□□□□ -0.96
ITGB4-207ENST00000580542 COL6A5A8TX70 2615 aa9.04□□□□□ -0.96
ITGB4-207ENST00000580542 CHCHD10Q8WYQ3 142 aaPredicted RBP9.04□□□□□ -0.96
ITGB4-207ENST00000580542 C7orf65Q6ZTY9 151 aa9.04□□□□□ -0.96
ITGB4-207ENST00000580542 C8orf87E5RJ46 101 aa9.03□□□□□ -0.96
ITGB4-207ENST00000580542 KRTAP10-11P60412 298 aa9.03□□□□□ -0.96
ITGB4-207ENST00000580542 PRO0255Q9UI72 69 aa9.03□□□□□ -0.96
ITGB4-207ENST00000580542 XAGE1AQ9HD64 81 aa9.02□□□□□ -0.96
ITGB4-207ENST00000580542 LINC00208Q96KT6 92 aa9.01□□□□□ -0.97
ITGB4-207ENST00000580542 OXLD1Q5BKU9 147 aa9.01□□□□□ -0.97
ITGB4-207ENST00000580542 SPAG11BQ08648 103 aa9□□□□□ -0.97
ITGB4-207ENST00000580542 DEFB105AQ8NG35 78 aa9□□□□□ -0.97
ITGB4-207ENST00000580542 H3BS24 57 aa8.99□□□□□ -0.97
ITGB4-207ENST00000580542 ANGP03950 147 aaKnown RBP8.98□□□□□ -0.97
ITGB4-207ENST00000580542 MP68P56378 58 aa8.98□□□□□ -0.97
ITGB4-207ENST00000580542 Q75L30 129 aa8.98□□□□□ -0.97
ITGB4-207ENST00000580542 REG3AQ06141 175 aa8.97□□□□□ -0.97
ITGB4-207ENST00000580542 K7EQZ3 153 aa8.96□□□□□ -0.97
ITGB4-207ENST00000580542 DEFB4AO15263 64 aa8.96□□□□□ -0.97
ITGB4-207ENST00000580542 KPRPQ5T749 579 aaPredicted RBP8.96□□□□□ -0.98
ITGB4-207ENST00000580542 CDC42SE1Q9NRR8 79 aa8.95□□□□□ -0.98
ITGB4-207ENST00000580542 LINC00528Q8N1L1 170 aa8.95□□□□□ -0.98
ITGB4-207ENST00000580542 A0A0J9YWU9 116 aa8.94□□□□□ -0.98
ITGB4-207ENST00000580542 DSCR10P59022 87 aa8.94□□□□□ -0.98
ITGB4-207ENST00000580542 Q8NAQ8 132 aa8.94□□□□□ -0.98
ITGB4-207ENST00000580542 DEFB135Q30KP9 77 aa8.93□□□□□ -0.98
ITGB4-207ENST00000580542 MDFIQ99750 246 aa8.93□□□□□ -0.98
ITGB4-207ENST00000580542 DEFB116Q30KQ4 102 aa8.93□□□□□ -0.98
ITGB4-207ENST00000580542 MOBPQ13875 183 aa8.92□□□□□ -0.98
ITGB4-207ENST00000580542 NKAPP1Q8N9T2 125 aa8.91□□□□□ -0.98
ITGB4-207ENST00000580542 Q9BRP9 147 aa8.91□□□□□ -0.98
ITGB4-207ENST00000580542 A0A1W2PNM2 257 aa8.9□□□□□ -0.98
ITGB4-207ENST00000580542 LOC101927531A0A1B0GV80 90 aa8.9□□□□□ -0.99
ITGB4-207ENST00000580542 NBEAL1Q6ZS30 2694 aa8.89□□□□□ -0.99
ITGB4-207ENST00000580542 WFDC13Q8IUB5 93 aa8.89□□□□□ -0.99
ITGB4-207ENST00000580542 SPANXA2-OT1Q8N9U9 137 aa8.89□□□□□ -0.99
ITGB4-207ENST00000580542 IGLV5-48A0A075B6I7 105 aa8.88□□□□□ -0.99
ITGB4-207ENST00000580542 Q8N377 158 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms