RNA–Protein interactions for RNA: ENST00000579944.1

LINC00271-206, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-206ENST00000579944 UNQ6190/PRO20217Q6UXQ8 127 aa1.29□□□□□ -2.2
LINC00271-206ENST00000579944 PLEKHB2Q96CS7 222 aa1.29□□□□□ -2.2
LINC00271-206ENST00000579944 C6orf48Q9UBA6 75 aa1.29□□□□□ -2.2
LINC00271-206ENST00000579944 CYSLTR1Q9Y271 337 aa1.29□□□□□ -2.2
LINC00271-206ENST00000579944 C22orf24Q9Y442 160 aa1.29□□□□□ -2.2
LINC00271-206ENST00000579944 LINC00959A0A1B0GUT2 108 aa1.28□□□□□ -2.2
LINC00271-206ENST00000579944 H3BVH4 76 aa1.28□□□□□ -2.2
LINC00271-206ENST00000579944 RAB4BP61018 213 aa1.28□□□□□ -2.2
LINC00271-206ENST00000579944 SPANXN5Q5MJ07 72 aa1.28□□□□□ -2.2
LINC00271-206ENST00000579944 S100A7AQ86SG5 101 aa1.28□□□□□ -2.2
LINC00271-206ENST00000579944 KRTAP8-1Q8IUC2 63 aa1.28□□□□□ -2.2
LINC00271-206ENST00000579944 CACFD1Q9UGQ2 172 aa1.28□□□□□ -2.2
LINC00271-206ENST00000579944 MUC5ACP98088 5654 aa1.28□□□□□ -2.2
LINC00271-206ENST00000579944 PDCD5O14737 125 aa1.27□□□□□ -2.21
LINC00271-206ENST00000579944 ATP5HO75947 161 aa1.27□□□□□ -2.21
LINC00271-206ENST00000579944 DEFA3P59666 94 aa1.27□□□□□ -2.21
LINC00271-206ENST00000579944 RRAS2P62070 204 aaPredicted RBP1.27□□□□□ -2.21
LINC00271-206ENST00000579944 PRLHP81277 87 aa1.27□□□□□ -2.21
LINC00271-206ENST00000579944 KRTAP19-8Q3LI54 63 aa1.27□□□□□ -2.21
LINC00271-206ENST00000579944 MIC13Q5XKP0 118 aa1.27□□□□□ -2.21
LINC00271-206ENST00000579944 Q86TA4 180 aa1.27□□□□□ -2.21
LINC00271-206ENST00000579944 C12orf45Q8N5I9 185 aaPredicted RBP1.27□□□□□ -2.21
LINC00271-206ENST00000579944 SPRR4Q96PI1 79 aa1.27□□□□□ -2.21
LINC00271-206ENST00000579944 AP4S1Q9Y587 144 aa1.27□□□□□ -2.21
LINC00271-206ENST00000579944 C1orf196B1AJZ1 125 aa1.26□□□□□ -2.21
LINC00271-206ENST00000579944 NBEAP1P0C6P0 100 aa1.26□□□□□ -2.21
LINC00271-206ENST00000579944 ARMS2P0C7Q2 107 aa1.26□□□□□ -2.21
LINC00271-206ENST00000579944 ARL14EPLP0DKL9 152 aa1.26□□□□□ -2.21
LINC00271-206ENST00000579944 SPAG11BQ08648 103 aa1.26□□□□□ -2.21
LINC00271-206ENST00000579944 LINC01554Q52M75 96 aa1.26□□□□□ -2.21
LINC00271-206ENST00000579944 TMEM14EPQ6UXP3 125 aa1.26□□□□□ -2.21
LINC00271-206ENST00000579944 COPZ2Q9P299 210 aa1.26□□□□□ -2.21
LINC00271-206ENST00000579944 PAIP2BQ9ULR5 123 aaKnown RBP1.26□□□□□ -2.21
LINC00271-206ENST00000579944 SNURFQ9Y675 71 aa1.26□□□□□ -2.21
LINC00271-206ENST00000579944 M0QY20 66 aa1.25□□□□□ -2.21
LINC00271-206ENST00000579944 TCRAP04437 139 aa1.25□□□□□ -2.21
LINC00271-206ENST00000579944 ZNF56Q15929 161 aa1.25□□□□□ -2.21
LINC00271-206ENST00000579944 RNASE10Q5GAN6 216 aaKnown RBP1.25□□□□□ -2.21
LINC00271-206ENST00000579944 LCA10Q71F78 164 aa1.25□□□□□ -2.21
LINC00271-206ENST00000579944 CIB3Q96Q77 187 aaPredicted RBP1.25□□□□□ -2.21
LINC00271-206ENST00000579944 PFDN5Q99471 154 aa1.25□□□□□ -2.21
LINC00271-206ENST00000579944 NHP2Q9NX24 153 aaKnown RBP1.25□□□□□ -2.21
LINC00271-206ENST00000579944 TRDV1A0A1B0GX56 115 aa1.24□□□□□ -2.21
LINC00271-206ENST00000579944 NDUFA1O15239 70 aa1.24□□□□□ -2.21
LINC00271-206ENST00000579944 BAALC-AS2P0C853 105 aa1.24□□□□□ -2.21
LINC00271-206ENST00000579944 SLC25A6P12236 298 aa1.24□□□□□ -2.21
LINC00271-206ENST00000579944 GNG5P63218 68 aa1.24□□□□□ -2.21
LINC00271-206ENST00000579944 LYRM7Q5U5X0 104 aa1.24□□□□□ -2.21
LINC00271-206ENST00000579944 GOLT1AQ6ZVE7 132 aa1.24□□□□□ -2.21
LINC00271-206ENST00000579944 HIST1H2BLQ99880 126 aa1.24□□□□□ -2.21
LINC00271-206ENST00000579944 EPDR1Q9UM22 224 aa1.24□□□□□ -2.21
LINC00271-206ENST00000579944 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.23□□□□□ -2.21
LINC00271-206ENST00000579944 CD3DP04234 171 aa1.23□□□□□ -2.21
LINC00271-206ENST00000579944 CRIP1P50238 77 aa1.23□□□□□ -2.21
LINC00271-206ENST00000579944 TMBIM6P55061 237 aa1.23□□□□□ -2.21
LINC00271-206ENST00000579944 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.23□□□□□ -2.21
LINC00271-206ENST00000579944 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.23□□□□□ -2.21
LINC00271-206ENST00000579944 C9orf16Q9BUW7 83 aa1.23□□□□□ -2.21
LINC00271-206ENST00000579944 ZNF25P17030 456 aaPredicted RBP1.22□□□□□ -2.21
LINC00271-206ENST00000579944 Q5VV11 94 aa1.22□□□□□ -2.21
LINC00271-206ENST00000579944 C5orf38Q86SI9 138 aa1.22□□□□□ -2.21
LINC00271-206ENST00000579944 OR10AG1Q8NH19 301 aa1.22□□□□□ -2.21
LINC00271-206ENST00000579944 PYDC1Q8WXC3 89 aa1.22□□□□□ -2.21
LINC00271-206ENST00000579944 OBSCN-AS1Q96MR7 158 aa1.22□□□□□ -2.21
LINC00271-206ENST00000579944 GGACTQ9BVM4 153 aa1.22□□□□□ -2.21
LINC00271-206ENST00000579944 CDC42SE2Q9NRR3 84 aa1.22□□□□□ -2.21
LINC00271-206ENST00000579944 LYRM2Q9NU23 88 aaPredicted RBP1.22□□□□□ -2.21
LINC00271-206ENST00000579944 PSENENQ9NZ42 101 aa1.22□□□□□ -2.21
LINC00271-206ENST00000579944 TRBV30A0A0K0K1B3 111 aa1.21□□□□□ -2.22
LINC00271-206ENST00000579944 TMEM238C9JI98 176 aa1.21□□□□□ -2.22
LINC00271-206ENST00000579944 M0R378 163 aa1.21□□□□□ -2.22
LINC00271-206ENST00000579944 CST7O76096 145 aa1.21□□□□□ -2.22
LINC00271-206ENST00000579944 TPT1P13693 172 aaKnown RBP1.21□□□□□ -2.22
LINC00271-206ENST00000579944 S100A5P33763 92 aa1.21□□□□□ -2.22
LINC00271-206ENST00000579944 SDC2P34741 201 aa1.21□□□□□ -2.22
LINC00271-206ENST00000579944 SSBP3-AS1Q7Z2R9 100 aa1.21□□□□□ -2.22
LINC00271-206ENST00000579944 HYLS1Q96M11 299 aa1.21□□□□□ -2.22
LINC00271-206ENST00000579944 NMES1Q9C002 83 aa1.21□□□□□ -2.22
LINC00271-206ENST00000579944 TMEM126AQ9H061 195 aa1.21□□□□□ -2.22
LINC00271-206ENST00000579944 OTORQ9NRC9 128 aa1.21□□□□□ -2.22
LINC00271-206ENST00000579944 ZNF727A8MUV8 499 aa1.2□□□□□ -2.22
LINC00271-206ENST00000579944 HMGB3O15347 200 aaKnown RBP1.2□□□□□ -2.22
LINC00271-206ENST00000579944 SSSCA1O60232 199 aa1.2□□□□□ -2.22
LINC00271-206ENST00000579944 FOXA3P55318 350 aaPredicted RBP1.2□□□□□ -2.22
LINC00271-206ENST00000579944 SCGB2B2Q4G0G5 96 aa1.2□□□□□ -2.22
LINC00271-206ENST00000579944 C2orf82Q6UX34 121 aa1.2□□□□□ -2.22
LINC00271-206ENST00000579944 SFT2D1Q8WV19 159 aa1.2□□□□□ -2.22
LINC00271-206ENST00000579944 S100A16Q96FQ6 103 aaKnown RBP1.2□□□□□ -2.22
LINC00271-206ENST00000579944 SLC25A21Q9BQT8 299 aaPredicted RBP1.2□□□□□ -2.22
LINC00271-206ENST00000579944 FAM107BQ9H098 131 aa1.2□□□□□ -2.22
LINC00271-206ENST00000579944 TRBV20-1A0A075B6N2 111 aa1.19□□□□□ -2.22
LINC00271-206ENST00000579944 UBE2L5PA0A1B0GUS4 154 aa1.19□□□□□ -2.22
LINC00271-206ENST00000579944 UBE2L3P68036 154 aaKnown RBP1.19□□□□□ -2.22
LINC00271-206ENST00000579944 SNX29P2Q8IUI4 249 aa1.19□□□□□ -2.22
LINC00271-206ENST00000579944 NPCDR1Q9BY65 106 aa1.19□□□□□ -2.22
LINC00271-206ENST00000579944 SPRR2GQ9BYE4 73 aa1.19□□□□□ -2.22
LINC00271-206ENST00000579944 NIT2Q9NQR4 276 aa1.19□□□□□ -2.22
LINC00271-206ENST00000579944 SCN3BQ9NY72 215 aa1.19□□□□□ -2.22
LINC00271-206ENST00000579944 ARL2-SNX15V9GYD0 113 aa1.19□□□□□ -2.22
LINC00271-206ENST00000579944 NCR2O95944 276 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms