RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 SPINK1P00995 79 aa6.67□□□□□ -1.34
MSI2-209ENST00000579483 C7orf65Q6ZTY9 151 aa6.66□□□□□ -1.34
MSI2-209ENST00000579483 TRBV7-7A0A0K0K1E9 115 aa6.66□□□□□ -1.34
MSI2-209ENST00000579483 PSORS1C2Q9UIG4 136 aa6.65□□□□□ -1.34
MSI2-209ENST00000579483 MPLKIPQ8TAP9 179 aa6.64□□□□□ -1.35
MSI2-209ENST00000579483 LCE6AA0A183 80 aa6.64□□□□□ -1.35
MSI2-209ENST00000579483 C9orf129Q5T035 196 aaKnown RBP6.64□□□□□ -1.35
MSI2-209ENST00000579483 Q6ZQT0 140 aa6.64□□□□□ -1.35
MSI2-209ENST00000579483 A6NED7 52 aa6.63□□□□□ -1.35
MSI2-209ENST00000579483 A0A087WVE0 104 aa6.63□□□□□ -1.35
MSI2-209ENST00000579483 A8MWP4 228 aa6.62□□□□□ -1.35
MSI2-209ENST00000579483 TMEM254Q8TBM7 123 aa6.62□□□□□ -1.35
MSI2-209ENST00000579483 ACYP2P14621 99 aa6.62□□□□□ -1.35
MSI2-209ENST00000579483 CR1P17927 2039 aa6.62□□□□□ -1.35
MSI2-209ENST00000579483 IGLV5-37A0A075B6J1 123 aa6.61□□□□□ -1.35
MSI2-209ENST00000579483 LITAFQ99732 161 aa6.61□□□□□ -1.35
MSI2-209ENST00000579483 FAM218AQ96MZ4 157 aa6.61□□□□□ -1.35
MSI2-209ENST00000579483 LOC101927531A0A1B0GV80 90 aa6.61□□□□□ -1.35
MSI2-209ENST00000579483 SPRR4Q96PI1 79 aa6.6□□□□□ -1.35
MSI2-209ENST00000579483 UNC79Q9P2D8 2635 aa6.6□□□□□ -1.35
MSI2-209ENST00000579483 STAB1Q9NY15 2570 aa6.6□□□□□ -1.35
MSI2-209ENST00000579483 A0A1W2PNN7 141 aa6.6□□□□□ -1.35
MSI2-209ENST00000579483 TRAV22A0A0B4J277 110 aa6.6□□□□□ -1.35
MSI2-209ENST00000579483 SMIM29Q86T20 159 aa6.6□□□□□ -1.35
MSI2-209ENST00000579483 MRPL34Q9BQ48 92 aaKnown RBP6.6□□□□□ -1.35
MSI2-209ENST00000579483 CENPEQ02224 2701 aa6.59□□□□□ -1.35
MSI2-209ENST00000579483 TEP1Q99973 2627 aaKnown RBP6.59□□□□□ -1.35
MSI2-209ENST00000579483 BRK1Q8WUW1 75 aa6.59□□□□□ -1.35
MSI2-209ENST00000579483 CHD7Q9P2D1 2997 aa6.59□□□□□ -1.36
MSI2-209ENST00000579483 CHD9Q3L8U1 2897 aa6.58□□□□□ -1.36
MSI2-209ENST00000579483 RBM12B-AS1Q9P1G2 102 aa6.58□□□□□ -1.36
MSI2-209ENST00000579483 SMIM26A0A096LP01 95 aa6.57□□□□□ -1.36
MSI2-209ENST00000579483 IGFL1Q6UW32 110 aa6.57□□□□□ -1.36
MSI2-209ENST00000579483 CEP350Q5VT06 3117 aa6.56□□□□□ -1.36
MSI2-209ENST00000579483 FAM229BQ4G0N7 80 aa6.56□□□□□ -1.36
MSI2-209ENST00000579483 COL6A5A8TX70 2615 aa6.55□□□□□ -1.36
MSI2-209ENST00000579483 DNAH12Q6ZR08 3092 aa6.55□□□□□ -1.36
MSI2-209ENST00000579483 CD164Q04900 197 aa6.55□□□□□ -1.36
MSI2-209ENST00000579483 SVIPQ8NHG7 77 aa6.54□□□□□ -1.36
MSI2-209ENST00000579483 A0A1B0GVX0 72 aa6.53□□□□□ -1.36
MSI2-209ENST00000579483 PLAC8Q9NZF1 115 aa6.52□□□□□ -1.37
MSI2-209ENST00000579483 Q8N377 158 aa6.52□□□□□ -1.37
MSI2-209ENST00000579483 OBSCN-AS1Q96MR7 158 aa6.52□□□□□ -1.37
MSI2-209ENST00000579483 C8orf17Q9NRJ1 99 aa6.52□□□□□ -1.37
MSI2-209ENST00000579483 BPTFQ12830 3046 aa6.51□□□□□ -1.37
MSI2-209ENST00000579483 IGSF10Q6WRI0 2623 aa6.5□□□□□ -1.37
MSI2-209ENST00000579483 C9orf92A6NGG3 77 aa6.5□□□□□ -1.37
MSI2-209ENST00000579483 PRR15Q8IV56 129 aa6.5□□□□□ -1.37
MSI2-209ENST00000579483 DSCR10P59022 87 aa6.5□□□□□ -1.37
MSI2-209ENST00000579483 IGLV7-46A0A075B6I9 117 aa6.5□□□□□ -1.37
MSI2-209ENST00000579483 TRANK1O15050 2925 aa6.48□□□□□ -1.37
MSI2-209ENST00000579483 A0A1B0GU69 56 aa6.48□□□□□ -1.37
MSI2-209ENST00000579483 CCDC179H3BU77 68 aa6.48□□□□□ -1.37
MSI2-209ENST00000579483 TEX15Q9BXT5 2789 aa6.48□□□□□ -1.37
MSI2-209ENST00000579483 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.47□□□□□ -1.37
MSI2-209ENST00000579483 ANAPC11Q9NYG5 84 aa6.47□□□□□ -1.37
MSI2-209ENST00000579483 Q6ZSA8 131 aa6.46□□□□□ -1.37
MSI2-209ENST00000579483 K7EQZ3 153 aa6.45□□□□□ -1.38
MSI2-209ENST00000579483 SMCPP49901 116 aaPredicted RBP6.44□□□□□ -1.38
MSI2-209ENST00000579483 PRR26Q8N8Z3 221 aa6.44□□□□□ -1.38
MSI2-209ENST00000579483 PRO0461Q9UI25 63 aa6.43□□□□□ -1.38
MSI2-209ENST00000579483 Q5VSD8 79 aa6.43□□□□□ -1.38
MSI2-209ENST00000579483 GCN1Q92616 2671 aaKnown RBP6.43□□□□□ -1.38
MSI2-209ENST00000579483 A0A0U1RQV1 116 aa6.42□□□□□ -1.38
MSI2-209ENST00000579483 ERC2-IT1O76042 136 aa6.42□□□□□ -1.38
MSI2-209ENST00000579483 CHD6Q8TD26 2715 aa6.42□□□□□ -1.38
MSI2-209ENST00000579483 UTRNP46939 3433 aa6.41□□□□□ -1.38
MSI2-209ENST00000579483 HTTP42858 3142 aa6.4□□□□□ -1.38
MSI2-209ENST00000579483 IGLV5-48A0A075B6I7 105 aa6.39□□□□□ -1.39
MSI2-209ENST00000579483 EIF4EBP3O60516 100 aaPredicted RBP6.39□□□□□ -1.39
MSI2-209ENST00000579483 SEC61BP60468 96 aaKnown RBP6.37□□□□□ -1.39
MSI2-209ENST00000579483 RANBP2P49792 3224 aaKnown RBP6.37□□□□□ -1.39
MSI2-209ENST00000579483 Q6ZR54 194 aa6.36□□□□□ -1.39
MSI2-209ENST00000579483 OXTP01178 125 aa6.36□□□□□ -1.39
MSI2-209ENST00000579483 A0A1W2PNM2 257 aa6.35□□□□□ -1.39
MSI2-209ENST00000579483 M0R2T5 61 aa6.33□□□□□ -1.4
MSI2-209ENST00000579483 KRTAP1-5Q9BYS1 174 aa6.33□□□□□ -1.4
MSI2-209ENST00000579483 PSPHP1O15172 72 aa6.33□□□□□ -1.4
MSI2-209ENST00000579483 KRTAP10-1P60331 282 aa6.33□□□□□ -1.4
MSI2-209ENST00000579483 MGAQ8IWI9 3026 aa6.33□□□□□ -1.4
MSI2-209ENST00000579483 DSPP15924 2871 aaKnown RBP6.32□□□□□ -1.4
MSI2-209ENST00000579483 NOTCH1P46531 2555 aa6.32□□□□□ -1.4
MSI2-209ENST00000579483 AKAP13Q12802 2813 aa6.32□□□□□ -1.4
MSI2-209ENST00000579483 SPRR1AP35321 89 aa6.32□□□□□ -1.4
MSI2-209ENST00000579483 A0A0G2JQZ4 141 aa6.31□□□□□ -1.4
MSI2-209ENST00000579483 SPRR1BP22528 89 aa6.3□□□□□ -1.4
MSI2-209ENST00000579483 KRTAP10-2P60368 255 aa6.29□□□□□ -1.4
MSI2-209ENST00000579483 FP248Q71RG6 208 aaPredicted RBP6.29□□□□□ -1.4
MSI2-209ENST00000579483 PMAIP1Q13794 54 aa6.28□□□□□ -1.4
MSI2-209ENST00000579483 C1orf195Q5TG92 126 aa6.27□□□□□ -1.41
MSI2-209ENST00000579483 C5orf42Q9H799 3197 aa6.26□□□□□ -1.41
MSI2-209ENST00000579483 LINC01600Q96MT4 127 aa6.26□□□□□ -1.41
MSI2-209ENST00000579483 NBEAL1Q6ZS30 2694 aa6.26□□□□□ -1.41
MSI2-209ENST00000579483 A8MUN3 132 aa6.25□□□□□ -1.41
MSI2-209ENST00000579483 KRTAP26-1Q6PEX3 210 aa6.25□□□□□ -1.41
MSI2-209ENST00000579483 FAM104AQ969W3 186 aa6.25□□□□□ -1.41
MSI2-209ENST00000579483 COA5Q86WW8 74 aa6.25□□□□□ -1.41
MSI2-209ENST00000579483 NSD1Q96L73 2696 aaPredicted RBP6.24□□□□□ -1.41
MSI2-209ENST00000579483 ITPR2Q14571 2701 aa6.24□□□□□ -1.41
MSI2-209ENST00000579483 UQCR11O14957 56 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms