RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 BORCS7Q96B45 105 aa2.25□□□□□ -2.05
PTPRM-206ENST00000578093 FAM218AQ96MZ4 157 aa2.25□□□□□ -2.05
PTPRM-206ENST00000578093 TMEM191AQ9H0A3 160 aa2.25□□□□□ -2.05
PTPRM-206ENST00000578093 XAGE1AQ9HD64 81 aa2.25□□□□□ -2.05
PTPRM-206ENST00000578093 C22orf24Q9Y442 160 aa2.25□□□□□ -2.05
PTPRM-206ENST00000578093 USH2AO75445 5202 aa2.24□□□□□ -2.05
PTPRM-206ENST00000578093 F8W1H4 67 aa2.24□□□□□ -2.05
PTPRM-206ENST00000578093 TMEM250H0YL14 139 aa2.24□□□□□ -2.05
PTPRM-206ENST00000578093 NUPR1O60356 82 aa2.24□□□□□ -2.05
PTPRM-206ENST00000578093 SERF1AO75920 110 aa2.24□□□□□ -2.05
PTPRM-206ENST00000578093 SPINK8P0C7L1 97 aa2.24□□□□□ -2.05
PTPRM-206ENST00000578093 CRYGAP11844 174 aa2.24□□□□□ -2.05
PTPRM-206ENST00000578093 MRPL51Q4U2R6 128 aaKnown RBP2.24□□□□□ -2.05
PTPRM-206ENST00000578093 LINC00173Q6ZV60 143 aa2.24□□□□□ -2.05
PTPRM-206ENST00000578093 Q6ZVH6 145 aa2.24□□□□□ -2.05
PTPRM-206ENST00000578093 FAM231DQ6ZW35 169 aa2.24□□□□□ -2.05
PTPRM-206ENST00000578093 Q8NBF4 154 aa2.24□□□□□ -2.05
PTPRM-206ENST00000578093 TIMM21Q9BVV7 248 aa2.24□□□□□ -2.05
PTPRM-206ENST00000578093 SPANXDQ9BXN6 97 aa2.24□□□□□ -2.05
PTPRM-206ENST00000578093 IGLV4-3A0A075B6K6 122 aa2.23□□□□□ -2.05
PTPRM-206ENST00000578093 TRBV30A0A0K0K1B3 111 aa2.23□□□□□ -2.05
PTPRM-206ENST00000578093 A0A1B0GUT8 65 aa2.23□□□□□ -2.05
PTPRM-206ENST00000578093 RPL37AP8A6NKH3 93 aa2.23□□□□□ -2.05
PTPRM-206ENST00000578093 A8MWL6 223 aa2.23□□□□□ -2.05
PTPRM-206ENST00000578093 BCE1O60756 84 aa2.23□□□□□ -2.05
PTPRM-206ENST00000578093 HBBP68871 147 aa2.23□□□□□ -2.05
PTPRM-206ENST00000578093 MRPS36P82909 103 aaKnown RBP2.23□□□□□ -2.05
PTPRM-206ENST00000578093 KRTAP19-2Q3LHN2 52 aa2.23□□□□□ -2.05
PTPRM-206ENST00000578093 Q6ZVQ6 151 aa2.23□□□□□ -2.05
PTPRM-206ENST00000578093 MRPL55Q7Z7F7 128 aaKnown RBP2.23□□□□□ -2.05
PTPRM-206ENST00000578093 C3orf22Q8N5N4 141 aa2.23□□□□□ -2.05
PTPRM-206ENST00000578093 C18orf32Q8TCD1 76 aa2.23□□□□□ -2.05
PTPRM-206ENST00000578093 KIR2DL4Q99706 377 aa2.23□□□□□ -2.05
PTPRM-206ENST00000578093 SMIM7Q9BQ49 75 aa2.23□□□□□ -2.05
PTPRM-206ENST00000578093 SMIM2Q9BVW6 85 aa2.23□□□□□ -2.05
PTPRM-206ENST00000578093 PPDPFQ9H3Y8 114 aa2.23□□□□□ -2.05
PTPRM-206ENST00000578093 MAP1LC3AQ9H492 121 aa2.23□□□□□ -2.05
PTPRM-206ENST00000578093 SPCS1Q9Y6A9 102 aa2.23□□□□□ -2.05
PTPRM-206ENST00000578093 A0A1B0GX51 115 aa2.22□□□□□ -2.05
PTPRM-206ENST00000578093 A0A1W2PPM0 123 aa2.22□□□□□ -2.05
PTPRM-206ENST00000578093 KRTAP16-1A8MUX0 517 aa2.22□□□□□ -2.05
PTPRM-206ENST00000578093 J3KT08 172 aa2.22□□□□□ -2.05
PTPRM-206ENST00000578093 NPYP01303 97 aa2.22□□□□□ -2.05
PTPRM-206ENST00000578093 C3orf79P0CE67 100 aa2.22□□□□□ -2.05
PTPRM-206ENST00000578093 RPL28P46779 137 aaKnown RBP2.22□□□□□ -2.05
PTPRM-206ENST00000578093 SEC61GP60059 68 aa2.22□□□□□ -2.05
PTPRM-206ENST00000578093 RPS28P62857 69 aaKnown RBP2.22□□□□□ -2.05
PTPRM-206ENST00000578093 MT1HP80294 61 aa2.22□□□□□ -2.05
PTPRM-206ENST00000578093 PRLHP81277 87 aa2.22□□□□□ -2.05
PTPRM-206ENST00000578093 KRTAP13-3Q3SY46 172 aa2.22□□□□□ -2.05
PTPRM-206ENST00000578093 ASB16-AS1Q495Z4 193 aa2.22□□□□□ -2.05
PTPRM-206ENST00000578093 FAM104BQ5XKR9 115 aa2.22□□□□□ -2.05
PTPRM-206ENST00000578093 LINC00167Q96N53 147 aa2.22□□□□□ -2.05
PTPRM-206ENST00000578093 MAP1LC3CQ9BXW4 147 aa2.22□□□□□ -2.05
PTPRM-206ENST00000578093 SPANXB1Q9NS25 103 aaPredicted RBP2.22□□□□□ -2.05
PTPRM-206ENST00000578093 TOMM7Q9P0U1 55 aa2.22□□□□□ -2.05
PTPRM-206ENST00000578093 V9GYV3 84 aa2.22□□□□□ -2.05
PTPRM-206ENST00000578093 H3BUT2 72 aa2.21□□□□□ -2.06
PTPRM-206ENST00000578093 SMIM13P0DJ93 91 aa2.21□□□□□ -2.06
PTPRM-206ENST00000578093 IFITM1P13164 125 aa2.21□□□□□ -2.06
PTPRM-206ENST00000578093 NDUFV3P56181 108 aaKnown RBP2.21□□□□□ -2.06
PTPRM-206ENST00000578093 RPL23P62829 140 aaKnown RBP2.21□□□□□ -2.06
PTPRM-206ENST00000578093 PMVKQ15126 192 aa2.21□□□□□ -2.06
PTPRM-206ENST00000578093 FAM229BQ4G0N7 80 aa2.21□□□□□ -2.06
PTPRM-206ENST00000578093 Q6Q795 121 aa2.21□□□□□ -2.06
PTPRM-206ENST00000578093 GNB1LQ9BYB4 327 aa2.21□□□□□ -2.06
PTPRM-206ENST00000578093 TP73-AS1Q9UF72 201 aa2.21□□□□□ -2.06
PTPRM-206ENST00000578093 IGKV2-28A0A075B6P5 120 aa2.2□□□□□ -2.06
PTPRM-206ENST00000578093 IGKV2D-26A0A0A0MRZ7 120 aa2.2□□□□□ -2.06
PTPRM-206ENST00000578093 D6R8Y8 96 aa2.2□□□□□ -2.06
PTPRM-206ENST00000578093 IGKV2D-28P01615 120 aa2.2□□□□□ -2.06
PTPRM-206ENST00000578093 COX8AP10176 69 aa2.2□□□□□ -2.06
PTPRM-206ENST00000578093 CKS2P33552 79 aa2.2□□□□□ -2.06
PTPRM-206ENST00000578093 IFI27P40305 119 aaPredicted RBP2.2□□□□□ -2.06
PTPRM-206ENST00000578093 UBE2AP49459 152 aa2.2□□□□□ -2.06
PTPRM-206ENST00000578093 RIGQ13278 110 aa2.2□□□□□ -2.06
PTPRM-206ENST00000578093 MEIG1Q5JSS6 88 aa2.2□□□□□ -2.06
PTPRM-206ENST00000578093 Q8IZM0 81 aa2.2□□□□□ -2.06
PTPRM-206ENST00000578093 Q8NDZ9 215 aa2.2□□□□□ -2.06
PTPRM-206ENST00000578093 TMEM141Q96I45 108 aa2.2□□□□□ -2.06
PTPRM-206ENST00000578093 C20orf78Q9BR46 151 aa2.2□□□□□ -2.06
PTPRM-206ENST00000578093 OSTCQ9NRP0 149 aa2.2□□□□□ -2.06
PTPRM-206ENST00000578093 A0A1B0GXF2 115 aa2.19□□□□□ -2.06
PTPRM-206ENST00000578093 C9JAW5 83 aa2.19□□□□□ -2.06
PTPRM-206ENST00000578093 H3BMG7 143 aa2.19□□□□□ -2.06
PTPRM-206ENST00000578093 SYS1-DBNDD2H3BUS1 97 aa2.19□□□□□ -2.06
PTPRM-206ENST00000578093 SNCGO76070 127 aa2.19□□□□□ -2.06
PTPRM-206ENST00000578093 PPP1R17O96001 155 aa2.19□□□□□ -2.06
PTPRM-206ENST00000578093 MT-ATP8P03928 68 aa2.19□□□□□ -2.06
PTPRM-206ENST00000578093 TMEM136Q6ZRR5 245 aa2.19□□□□□ -2.06
PTPRM-206ENST00000578093 ATOH7Q8N100 152 aa2.19□□□□□ -2.06
PTPRM-206ENST00000578093 LINC01561Q8N1V8 128 aa2.19□□□□□ -2.06
PTPRM-206ENST00000578093 DAND5Q8N907 189 aa2.19□□□□□ -2.06
PTPRM-206ENST00000578093 PPDPFLQ8WWR9 84 aa2.19□□□□□ -2.06
PTPRM-206ENST00000578093 AMELXQ99217 191 aa2.19□□□□□ -2.06
PTPRM-206ENST00000578093 CDKN2A-AS1Q9UH64 79 aa2.19□□□□□ -2.06
PTPRM-206ENST00000578093 V9GYY9 64 aa2.19□□□□□ -2.06
PTPRM-206ENST00000578093 A0A1B0GWB2 263 aa2.18□□□□□ -2.06
PTPRM-206ENST00000578093 SMIM27A0A1W2PRY6 76 aa2.18□□□□□ -2.06
PTPRM-206ENST00000578093 F8VRH5 84 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms