RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 NRXN2Q9P2S2 1712 aa2.59□□□□□ -1.99
BRIP1-202ENST00000577598 HMGA1P17096 107 aaKnown RBP2.59□□□□□ -2
BRIP1-202ENST00000577598 KLK9Q2XQG4 91 aa2.59□□□□□ -2
BRIP1-202ENST00000577598 PAPPA2Q9BXP8 1791 aa2.59□□□□□ -2
BRIP1-202ENST00000577598 GVQW2A0A096LPI5 108 aaPredicted RBP2.58□□□□□ -2
BRIP1-202ENST00000577598 INE1O15225 51 aa2.57□□□□□ -2
BRIP1-202ENST00000577598 ETDCA0A1B0GVM5 59 aa2.57□□□□□ -2
BRIP1-202ENST00000577598 PIGYQ3MUY2 71 aa2.57□□□□□ -2
BRIP1-202ENST00000577598 CRIP1P50238 77 aa2.57□□□□□ -2
BRIP1-202ENST00000577598 ASH1LQ9NR48 2969 aaKnown RBP2.56□□□□□ -2
BRIP1-202ENST00000577598 KRTAP1-4P0C5Y4 121 aa2.56□□□□□ -2
BRIP1-202ENST00000577598 LYNX1P0DP58 116 aa2.56□□□□□ -2
BRIP1-202ENST00000577598 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
BRIP1-202ENST00000577598 KRTAP9-3Q9BYQ3 159 aa2.56□□□□□ -2
BRIP1-202ENST00000577598 C10orf95Q9H7T3 257 aa2.56□□□□□ -2
BRIP1-202ENST00000577598 PRO0255Q9UI72 69 aa2.56□□□□□ -2
BRIP1-202ENST00000577598 CMC2Q9NRP2 79 aa2.56□□□□□ -2
BRIP1-202ENST00000577598 KRTAP19-1Q8IUB9 90 aa2.55□□□□□ -2
BRIP1-202ENST00000577598 ZCCHC13Q8WW36 166 aaKnown RBP2.55□□□□□ -2
BRIP1-202ENST00000577598 EP300Q09472 2414 aaPredicted RBP2.55□□□□□ -2
BRIP1-202ENST00000577598 DEFB103AP81534 67 aa2.54□□□□□ -2
BRIP1-202ENST00000577598 SERF2P84101 59 aa2.54□□□□□ -2
BRIP1-202ENST00000577598 CDKN2A-AS1Q9UH64 79 aa2.54□□□□□ -2
BRIP1-202ENST00000577598 LINC00158P58513 81 aa2.53□□□□□ -2
BRIP1-202ENST00000577598 Q6ZSA8 131 aa2.53□□□□□ -2
BRIP1-202ENST00000577598 TNRC6BQ9UPQ9 1833 aaKnown RBP2.52□□□□□ -2.01
BRIP1-202ENST00000577598 SPTAN1Q13813 2472 aaKnown RBP2.52□□□□□ -2.01
BRIP1-202ENST00000577598 KRTAP13-4Q3LI77 160 aa2.52□□□□□ -2.01
BRIP1-202ENST00000577598 LELP1Q5T871 98 aa2.52□□□□□ -2.01
BRIP1-202ENST00000577598 MINOS1Q5TGZ0 78 aa2.52□□□□□ -2.01
BRIP1-202ENST00000577598 ACANP16112 2415 aa2.51□□□□□ -2.01
BRIP1-202ENST00000577598 KAAG1Q9UBP8 84 aa2.5□□□□□ -2.01
BRIP1-202ENST00000577598 M0R2N4 97 aa2.5□□□□□ -2.01
BRIP1-202ENST00000577598 WFDC10BQ8IUB3 73 aa2.5□□□□□ -2.01
BRIP1-202ENST00000577598 WFDC13Q8IUB5 93 aa2.5□□□□□ -2.01
BRIP1-202ENST00000577598 BPTFQ12830 3046 aa2.49□□□□□ -2.01
BRIP1-202ENST00000577598 SSC5DA1L4H1 1573 aa2.49□□□□□ -2.01
BRIP1-202ENST00000577598 MT3P25713 68 aa2.49□□□□□ -2.01
BRIP1-202ENST00000577598 SPINK13Q1W4C9 94 aa2.48□□□□□ -2.01
BRIP1-202ENST00000577598 USP24Q9UPU5 2620 aa2.48□□□□□ -2.01
BRIP1-202ENST00000577598 PLXNB2O15031 1838 aa2.47□□□□□ -2.01
BRIP1-202ENST00000577598 COL4A6Q14031 1691 aa2.47□□□□□ -2.01
BRIP1-202ENST00000577598 MRPL33O75394 65 aaKnown RBP2.46□□□□□ -2.02
BRIP1-202ENST00000577598 RPL37P61927 97 aaKnown RBP2.46□□□□□ -2.02
BRIP1-202ENST00000577598 MTORP42345 2549 aa2.46□□□□□ -2.02
BRIP1-202ENST00000577598 KRTAP12-2P59991 146 aa2.45□□□□□ -2.02
BRIP1-202ENST00000577598 KRTAP13-3Q3SY46 172 aa2.45□□□□□ -2.02
BRIP1-202ENST00000577598 ANKHD1Q8IWZ3 2542 aaKnown RBP2.45□□□□□ -2.02
BRIP1-202ENST00000577598 SRRM2Q9UQ35 2752 aaKnown RBP2.45□□□□□ -2.02
BRIP1-202ENST00000577598 LCE3BQ5TA77 95 aa2.45□□□□□ -2.02
BRIP1-202ENST00000577598 A0A0G2JMZ2 1700 aa2.45□□□□□ -2.02
BRIP1-202ENST00000577598 LRRC37A2A6NM11 1700 aa2.45□□□□□ -2.02
BRIP1-202ENST00000577598 LINC00308Q8TCZ7 52 aa2.45□□□□□ -2.02
BRIP1-202ENST00000577598 CHD9Q3L8U1 2897 aa2.45□□□□□ -2.02
BRIP1-202ENST00000577598 COL4A4P53420 1690 aaPredicted RBP2.44□□□□□ -2.02
BRIP1-202ENST00000577598 TP53AIP1Q9HCN2 124 aa2.44□□□□□ -2.02
BRIP1-202ENST00000577598 FBN1P35555 2871 aaKnown RBP2.44□□□□□ -2.02
BRIP1-202ENST00000577598 H3BSH0 61 aa2.44□□□□□ -2.02
BRIP1-202ENST00000577598 MYO18BQ8IUG5 2567 aa2.43□□□□□ -2.02
BRIP1-202ENST00000577598 DEFB132Q7Z7B7 95 aa2.43□□□□□ -2.02
BRIP1-202ENST00000577598 AKAP13Q12802 2813 aa2.43□□□□□ -2.02
BRIP1-202ENST00000577598 MEGF8Q7Z7M0 2845 aa2.42□□□□□ -2.02
BRIP1-202ENST00000577598 PRLHP81277 87 aa2.42□□□□□ -2.02
BRIP1-202ENST00000577598 TSC2P49815 1807 aa2.42□□□□□ -2.02
BRIP1-202ENST00000577598 OBSCNQ5VST9 7968 aa2.42□□□□□ -2.02
BRIP1-202ENST00000577598 MRPL34Q9BQ48 92 aaKnown RBP2.41□□□□□ -2.02
BRIP1-202ENST00000577598 LINC00575Q6W349 94 aa2.41□□□□□ -2.02
BRIP1-202ENST00000577598 ACACBO00763 2458 aa2.41□□□□□ -2.02
BRIP1-202ENST00000577598 Q8IZM0 81 aa2.41□□□□□ -2.02
BRIP1-202ENST00000577598 SMIM27A0A1W2PRY6 76 aa2.4□□□□□ -2.02
BRIP1-202ENST00000577598 H0YGX0 51 aa2.4□□□□□ -2.02
BRIP1-202ENST00000577598 SETD2Q9BYW2 2564 aaPredicted RBP2.4□□□□□ -2.03
BRIP1-202ENST00000577598 LCE1EQ5T753 118 aa2.4□□□□□ -2.03
BRIP1-202ENST00000577598 TTTY10Q9BZA0 68 aa2.4□□□□□ -2.03
BRIP1-202ENST00000577598 Q9Y3F1 56 aa2.4□□□□□ -2.03
BRIP1-202ENST00000577598 SPINK1P00995 79 aa2.4□□□□□ -2.03
BRIP1-202ENST00000577598 IAPPP10997 89 aa2.4□□□□□ -2.03
BRIP1-202ENST00000577598 TLN2Q9Y4G6 2542 aa2.39□□□□□ -2.03
BRIP1-202ENST00000577598 USP9XQ93008 2570 aaPredicted RBP2.39□□□□□ -2.03
BRIP1-202ENST00000577598 KRTAP10-1P60331 282 aa2.39□□□□□ -2.03
BRIP1-202ENST00000577598 UNQ6190/PRO20217Q6UXQ8 127 aa2.39□□□□□ -2.03
BRIP1-202ENST00000577598 C5orf42Q9H799 3197 aa2.39□□□□□ -2.03
BRIP1-202ENST00000577598 COX6A2Q02221 97 aa2.39□□□□□ -2.03
BRIP1-202ENST00000577598 ANGP03950 147 aaKnown RBP2.39□□□□□ -2.03
BRIP1-202ENST00000577598 KRTAP10-3P60369 221 aa2.38□□□□□ -2.03
BRIP1-202ENST00000577598 KRTAP10-11P60412 298 aa2.38□□□□□ -2.03
BRIP1-202ENST00000577598 DEFB104AQ8WTQ1 72 aa2.38□□□□□ -2.03
BRIP1-202ENST00000577598 PLAC8Q9NZF1 115 aa2.38□□□□□ -2.03
BRIP1-202ENST00000577598 LCE1AQ5T7P2 110 aa2.37□□□□□ -2.03
BRIP1-202ENST00000577598 UNC79Q9P2D8 2635 aa2.37□□□□□ -2.03
BRIP1-202ENST00000577598 C6orf48Q9UBA6 75 aa2.37□□□□□ -2.03
BRIP1-202ENST00000577598 H1FX-AS1Q4G0G2 97 aa2.37□□□□□ -2.03
BRIP1-202ENST00000577598 K7EQZ3 153 aa2.36□□□□□ -2.03
BRIP1-202ENST00000577598 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
BRIP1-202ENST00000577598 USMG5Q96IX5 58 aa2.36□□□□□ -2.03
BRIP1-202ENST00000577598 COL4A5P29400 1685 aa2.36□□□□□ -2.03
BRIP1-202ENST00000577598 KRTAP10-12P60413 245 aa2.35□□□□□ -2.03
BRIP1-202ENST00000577598 EP400Q96L91 3159 aa2.35□□□□□ -2.03
BRIP1-202ENST00000577598 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
BRIP1-202ENST00000577598 IGIPA6NJ69 53 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms