RNA–Protein interactions for RNA: ENST00000577468.2

PTPRM-204, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-204ENST00000577468 F5P12259 2224 aa1.77□□□□□ -2.13
PTPRM-204ENST00000577468 A0A1W2PNN7 141 aa1.77□□□□□ -2.13
PTPRM-204ENST00000577468 PRB1P04280 392 aa1.77□□□□□ -2.13
PTPRM-204ENST00000577468 RPL37AP61513 92 aaKnown RBP1.77□□□□□ -2.13
PTPRM-204ENST00000577468 RPL39P62891 51 aaKnown RBP1.77□□□□□ -2.13
PTPRM-204ENST00000577468 LINC00575Q6W349 94 aa1.77□□□□□ -2.13
PTPRM-204ENST00000577468 LINC00612Q8N6U2 182 aa1.77□□□□□ -2.13
PTPRM-204ENST00000577468 C5orf56Q8N8D9 126 aa1.77□□□□□ -2.13
PTPRM-204ENST00000577468 RPL39LQ96EH5 51 aaKnown RBP1.77□□□□□ -2.13
PTPRM-204ENST00000577468 Q96NJ1 140 aa1.77□□□□□ -2.13
PTPRM-204ENST00000577468 R4GN34 69 aa1.77□□□□□ -2.13
PTPRM-204ENST00000577468 ANKRD11Q6UB99 2663 aaPredicted RBP1.76□□□□□ -2.13
PTPRM-204ENST00000577468 CHD9Q3L8U1 2897 aa1.76□□□□□ -2.13
PTPRM-204ENST00000577468 CACNA1BQ00975 2339 aa1.76□□□□□ -2.13
PTPRM-204ENST00000577468 ACYP2P14621 99 aa1.76□□□□□ -2.13
PTPRM-204ENST00000577468 LINC00315P59091 139 aa1.76□□□□□ -2.13
PTPRM-204ENST00000577468 Q6ZQY7 126 aa1.76□□□□□ -2.13
PTPRM-204ENST00000577468 TMEM167AQ8TBQ9 72 aa1.76□□□□□ -2.13
PTPRM-204ENST00000577468 EPG5Q9HCE0 2579 aa1.76□□□□□ -2.13
PTPRM-204ENST00000577468 A0A0J9YWU9 116 aa1.75□□□□□ -2.13
PTPRM-204ENST00000577468 LY6EQ16553 131 aa1.75□□□□□ -2.13
PTPRM-204ENST00000577468 CDH23Q9H251 3354 aa1.75□□□□□ -2.13
PTPRM-204ENST00000577468 WDFY4Q6ZS81 3184 aa1.75□□□□□ -2.13
PTPRM-204ENST00000577468 RIF1Q5UIP0 2472 aaKnown RBP1.75□□□□□ -2.13
PTPRM-204ENST00000577468 REV3LO60673 3130 aa1.75□□□□□ -2.13
PTPRM-204ENST00000577468 BRWD1Q9NSI6 2320 aa1.74□□□□□ -2.13
PTPRM-204ENST00000577468 ZNF318Q5VUA4 2279 aa1.74□□□□□ -2.13
PTPRM-204ENST00000577468 NCOR2Q9Y618 2525 aa1.74□□□□□ -2.13
PTPRM-204ENST00000577468 CFAP54Q96N23 3096 aa1.74□□□□□ -2.13
PTPRM-204ENST00000577468 MUC3AQ02505 3323 aa1.74□□□□□ -2.13
PTPRM-204ENST00000577468 M0R2N4 97 aa1.74□□□□□ -2.13
PTPRM-204ENST00000577468 DEFB103AP81534 67 aa1.74□□□□□ -2.13
PTPRM-204ENST00000577468 Q8IZM0 81 aa1.74□□□□□ -2.13
PTPRM-204ENST00000577468 Q8N9L7 120 aa1.74□□□□□ -2.13
PTPRM-204ENST00000577468 LINC00304Q8N9R0 145 aa1.74□□□□□ -2.13
PTPRM-204ENST00000577468 CCL26Q9Y258 94 aa1.74□□□□□ -2.13
PTPRM-204ENST00000577468 CHD6Q8TD26 2715 aa1.74□□□□□ -2.13
PTPRM-204ENST00000577468 SPTBN2O15020 2390 aa1.73□□□□□ -2.13
PTPRM-204ENST00000577468 TPRP12270 2363 aaKnown RBP1.73□□□□□ -2.13
PTPRM-204ENST00000577468 CHD7Q9P2D1 2997 aa1.73□□□□□ -2.13
PTPRM-204ENST00000577468 ACACBO00763 2458 aa1.73□□□□□ -2.13
PTPRM-204ENST00000577468 XIRP2A4UGR9 3374 aa1.73□□□□□ -2.13
PTPRM-204ENST00000577468 IGKV2D-24A0A075B6R9 120 aa1.73□□□□□ -2.13
PTPRM-204ENST00000577468 A0A096LNT2 108 aa1.73□□□□□ -2.13
PTPRM-204ENST00000577468 A0A0G2JQZ4 141 aa1.73□□□□□ -2.13
PTPRM-204ENST00000577468 PRB3Q04118 309 aaPredicted RBP1.73□□□□□ -2.13
PTPRM-204ENST00000577468 WT1-ASQ06250 92 aa1.73□□□□□ -2.13
PTPRM-204ENST00000577468 CDKN2A-AS1Q9UH64 79 aa1.73□□□□□ -2.13
PTPRM-204ENST00000577468 EP300Q09472 2414 aaPredicted RBP1.73□□□□□ -2.13
PTPRM-204ENST00000577468 TRIOO75962 3097 aa1.73□□□□□ -2.13
PTPRM-204ENST00000577468 FAM186AA6NE01 2351 aa1.72□□□□□ -2.13
PTPRM-204ENST00000577468 GPR179Q6PRD1 2367 aa1.72□□□□□ -2.13
PTPRM-204ENST00000577468 M0QY20 66 aa1.72□□□□□ -2.13
PTPRM-204ENST00000577468 IGLV6-57P01721 117 aa1.72□□□□□ -2.13
PTPRM-204ENST00000577468 HRES1P13985 223 aa1.72□□□□□ -2.13
PTPRM-204ENST00000577468 KRTAP11-1Q8IUC1 163 aa1.72□□□□□ -2.13
PTPRM-204ENST00000577468 CCL19Q99731 98 aa1.72□□□□□ -2.13
PTPRM-204ENST00000577468 ANAPC11Q9NYG5 84 aa1.72□□□□□ -2.13
PTPRM-204ENST00000577468 FLNBO75369 2602 aaKnown RBP1.72□□□□□ -2.13
PTPRM-204ENST00000577468 MED13LQ71F56 2210 aa1.72□□□□□ -2.13
PTPRM-204ENST00000577468 SORL1Q92673 2214 aa1.72□□□□□ -2.13
PTPRM-204ENST00000577468 ZNF292O60281 2723 aa1.72□□□□□ -2.13
PTPRM-204ENST00000577468 PTPRQQ9UMZ3 2332 aa1.72□□□□□ -2.13
PTPRM-204ENST00000577468 MAP1BP46821 2468 aaKnown RBP1.72□□□□□ -2.13
PTPRM-204ENST00000577468 ANKRD17O75179 2603 aaKnown RBP1.71□□□□□ -2.13
PTPRM-204ENST00000577468 GVINP1Q7Z2Y8 2422 aa1.71□□□□□ -2.14
PTPRM-204ENST00000577468 USP9XQ93008 2570 aaPredicted RBP1.71□□□□□ -2.14
PTPRM-204ENST00000577468 CACNA1HO95180 2353 aa1.71□□□□□ -2.14
PTPRM-204ENST00000577468 TECTAO75443 2155 aa1.71□□□□□ -2.14
PTPRM-204ENST00000577468 C5orf42Q9H799 3197 aa1.71□□□□□ -2.14
PTPRM-204ENST00000577468 I3L2K1 104 aa1.71□□□□□ -2.14
PTPRM-204ENST00000577468 DEFB134Q4QY38 66 aa1.71□□□□□ -2.14
PTPRM-204ENST00000577468 RPL39P5Q59GN2 51 aa1.71□□□□□ -2.14
PTPRM-204ENST00000577468 C10orf55Q5SWW7 151 aa1.71□□□□□ -2.14
PTPRM-204ENST00000577468 SSBP3-AS1Q7Z2R9 100 aa1.71□□□□□ -2.14
PTPRM-204ENST00000577468 COX14Q96I36 57 aa1.71□□□□□ -2.14
PTPRM-204ENST00000577468 ASH1LQ9NR48 2969 aaKnown RBP1.71□□□□□ -2.14
PTPRM-204ENST00000577468 URB1O60287 2271 aaKnown RBP1.7□□□□□ -2.14
PTPRM-204ENST00000577468 CEP250Q9BV73 2442 aa1.7□□□□□ -2.14
PTPRM-204ENST00000577468 FASNP49327 2511 aaKnown RBP1.7□□□□□ -2.14
PTPRM-204ENST00000577468 GCN1Q92616 2671 aaKnown RBP1.7□□□□□ -2.14
PTPRM-204ENST00000577468 IGLV5-48A0A075B6I7 105 aa1.7□□□□□ -2.14
PTPRM-204ENST00000577468 K7EIM0 57 aa1.7□□□□□ -2.14
PTPRM-204ENST00000577468 TPRXLQ17RH7 258 aa1.7□□□□□ -2.14
PTPRM-204ENST00000577468 USP34Q70CQ2 3546 aa1.7□□□□□ -2.14
PTPRM-204ENST00000577468 LEAP2Q969E1 77 aa1.7□□□□□ -2.14
PTPRM-204ENST00000577468 CEP295Q9C0D2 2601 aa1.7□□□□□ -2.14
PTPRM-204ENST00000577468 TP53AIP1Q9HCN2 124 aa1.7□□□□□ -2.14
PTPRM-204ENST00000577468 Q9Y3F1 56 aa1.7□□□□□ -2.14
PTPRM-204ENST00000577468 FBN3Q75N90 2809 aa1.7□□□□□ -2.14
PTPRM-204ENST00000577468 ZFYVE26Q68DK2 2539 aa1.7□□□□□ -2.14
PTPRM-204ENST00000577468 USP24Q9UPU5 2620 aa1.7□□□□□ -2.14
PTPRM-204ENST00000577468 PTPN13Q12923 2485 aa1.69□□□□□ -2.14
PTPRM-204ENST00000577468 CFAP47Q6ZTR5 3102 aa1.69□□□□□ -2.14
PTPRM-204ENST00000577468 FRYLO94915 3013 aa1.69□□□□□ -2.14
PTPRM-204ENST00000577468 SPTY2D1-AS1A0A0U1RR47 76 aa1.69□□□□□ -2.14
PTPRM-204ENST00000577468 LYNX1G3V0Z9 82 aa1.69□□□□□ -2.14
PTPRM-204ENST00000577468 LY6G6CO95867 125 aa1.69□□□□□ -2.14
PTPRM-204ENST00000577468 ANGP03950 147 aaKnown RBP1.69□□□□□ -2.14
PTPRM-204ENST00000577468 SPACA4Q8TDM5 124 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms