RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.15□□□□□ -1.26
COPS3-214ENST00000577246 ST20-AS1Q8NBB2 130 aa7.15□□□□□ -1.26
COPS3-214ENST00000577246 LAMTOR3Q9UHA4 124 aa7.15□□□□□ -1.26
COPS3-214ENST00000577246 SPRR1BP22528 89 aa7.14□□□□□ -1.27
COPS3-214ENST00000577246 CD164Q04900 197 aa7.14□□□□□ -1.27
COPS3-214ENST00000577246 RPL37P61927 97 aaKnown RBP7.13□□□□□ -1.27
COPS3-214ENST00000577246 CLLU1Q5K131 121 aa7.13□□□□□ -1.27
COPS3-214ENST00000577246 RHEBQ15382 184 aa7.12□□□□□ -1.27
COPS3-214ENST00000577246 CHCHD1Q96BP2 118 aaKnown RBP7.11□□□□□ -1.27
COPS3-214ENST00000577246 DHRS4-AS1Q9P1J3 65 aa7.11□□□□□ -1.27
COPS3-214ENST00000577246 LEPROTO15243 131 aa7.1□□□□□ -1.27
COPS3-214ENST00000577246 NMUP48645 174 aa7.1□□□□□ -1.27
COPS3-214ENST00000577246 RPS10P5Q9NQ39 176 aa7.1□□□□□ -1.27
COPS3-214ENST00000577246 H7C2G1 150 aa7.09□□□□□ -1.27
COPS3-214ENST00000577246 Q5XG85 94 aa7.09□□□□□ -1.27
COPS3-214ENST00000577246 PRO1933Q9H354 126 aa7.09□□□□□ -1.27
COPS3-214ENST00000577246 TSPEAR-AS2P59090 65 aa7.08□□□□□ -1.28
COPS3-214ENST00000577246 HERVK_113P61574 105 aa7.08□□□□□ -1.28
COPS3-214ENST00000577246 J3QQQ9 107 aa7.07□□□□□ -1.28
COPS3-214ENST00000577246 CFC1P0CG37 223 aa7.07□□□□□ -1.28
COPS3-214ENST00000577246 PLNP26678 52 aa7.07□□□□□ -1.28
COPS3-214ENST00000577246 FLGP20930 4061 aaPredicted RBP7.06□□□□□ -1.28
COPS3-214ENST00000577246 LGALS3P17931 250 aaKnown RBP7.06□□□□□ -1.28
COPS3-214ENST00000577246 H0Y8G0 127 aa7.05□□□□□ -1.28
COPS3-214ENST00000577246 TAL2Q16559 108 aa7.05□□□□□ -1.28
COPS3-214ENST00000577246 C1orf195Q5TG92 126 aa7.05□□□□□ -1.28
COPS3-214ENST00000577246 HSBP1O75506 76 aa7.04□□□□□ -1.28
COPS3-214ENST00000577246 AKR1D1P51857 326 aa7.04□□□□□ -1.28
COPS3-214ENST00000577246 Q1RN00 199 aa7.04□□□□□ -1.28
COPS3-214ENST00000577246 NPC2P61916 151 aa7.03□□□□□ -1.28
COPS3-214ENST00000577246 OR13C6PQ8NH95 151 aa7.03□□□□□ -1.28
COPS3-214ENST00000577246 TEX49A0A1B0GTD5 131 aa7.02□□□□□ -1.29
COPS3-214ENST00000577246 Q6Q795 121 aa7.02□□□□□ -1.29
COPS3-214ENST00000577246 SOSTDC1Q6X4U4 206 aa7.02□□□□□ -1.29
COPS3-214ENST00000577246 ELOF1P60002 83 aaKnown RBP7.01□□□□□ -1.29
COPS3-214ENST00000577246 C10orf91Q5T1B1 145 aa7.01□□□□□ -1.29
COPS3-214ENST00000577246 SMIM29Q86T20 159 aa7.01□□□□□ -1.29
COPS3-214ENST00000577246 DEFB105AQ8NG35 78 aa7.01□□□□□ -1.29
COPS3-214ENST00000577246 SPANXCQ9NY87 97 aa7.01□□□□□ -1.29
COPS3-214ENST00000577246 DPM2O94777 84 aa7□□□□□ -1.29
COPS3-214ENST00000577246 TCL1BO95988 128 aa7□□□□□ -1.29
COPS3-214ENST00000577246 COX7BP24311 80 aa7□□□□□ -1.29
COPS3-214ENST00000577246 A0A0J9YXY3 114 aa6.99□□□□□ -1.29
COPS3-214ENST00000577246 LEPROTL1O95214 131 aa6.99□□□□□ -1.29
COPS3-214ENST00000577246 SPANXDQ9BXN6 97 aa6.99□□□□□ -1.29
COPS3-214ENST00000577246 EIF4EBP3O60516 100 aaPredicted RBP6.98□□□□□ -1.29
COPS3-214ENST00000577246 ADAMTSL4-AS1Q5T5F5 129 aa6.98□□□□□ -1.29
COPS3-214ENST00000577246 IGKCP01834 107 aa6.97□□□□□ -1.29
COPS3-214ENST00000577246 ATP11AUNQ6ZP68 121 aa6.97□□□□□ -1.29
COPS3-214ENST00000577246 USH2AO75445 5202 aa6.97□□□□□ -1.29
COPS3-214ENST00000577246 C6orf99Q4VX62 202 aa6.96□□□□□ -1.3
COPS3-214ENST00000577246 LINC00308Q8TCZ7 52 aa6.96□□□□□ -1.3
COPS3-214ENST00000577246 HSPB8Q9UJY1 196 aa6.96□□□□□ -1.3
COPS3-214ENST00000577246 LINC00518Q8N0U6 118 aa6.95□□□□□ -1.3
COPS3-214ENST00000577246 SSPOA2VEC9 5147 aa6.94□□□□□ -1.3
COPS3-214ENST00000577246 TRBV7-6A0A0J9YX20 115 aa6.94□□□□□ -1.3
COPS3-214ENST00000577246 E9PLD3 99 aa6.93□□□□□ -1.3
COPS3-214ENST00000577246 TIMM17BO60830 172 aa6.93□□□□□ -1.3
COPS3-214ENST00000577246 SNAPINO95295 136 aa6.93□□□□□ -1.3
COPS3-214ENST00000577246 IGLV5-48A0A075B6I7 105 aa6.92□□□□□ -1.3
COPS3-214ENST00000577246 C20orf202A1L168 122 aa6.92□□□□□ -1.3
COPS3-214ENST00000577246 NDUFA5Q16718 116 aa6.92□□□□□ -1.3
COPS3-214ENST00000577246 Q75L30 129 aa6.92□□□□□ -1.3
COPS3-214ENST00000577246 PMCHL2Q9BQD1 86 aa6.92□□□□□ -1.3
COPS3-214ENST00000577246 A0A1B0GWB2 263 aa6.91□□□□□ -1.3
COPS3-214ENST00000577246 PCP2Q8IVA1 136 aa6.91□□□□□ -1.3
COPS3-214ENST00000577246 SVBPQ8N300 66 aa6.91□□□□□ -1.3
COPS3-214ENST00000577246 KRTAP9-8Q9BYQ0 159 aa6.91□□□□□ -1.3
COPS3-214ENST00000577246 APOC3P02656 99 aa6.9□□□□□ -1.3
COPS3-214ENST00000577246 LITAFQ99732 161 aa6.9□□□□□ -1.3
COPS3-214ENST00000577246 A0A0G2JQZ4 141 aa6.89□□□□□ -1.31
COPS3-214ENST00000577246 NHP2Q9NX24 153 aaKnown RBP6.89□□□□□ -1.31
COPS3-214ENST00000577246 A4D1N5 150 aa6.88□□□□□ -1.31
COPS3-214ENST00000577246 F8WEM9 126 aa6.88□□□□□ -1.31
COPS3-214ENST00000577246 SERF1AO75920 110 aa6.88□□□□□ -1.31
COPS3-214ENST00000577246 FABP4P15090 132 aa6.88□□□□□ -1.31
COPS3-214ENST00000577246 OBSCN-AS1Q96MR7 158 aa6.88□□□□□ -1.31
COPS3-214ENST00000577246 FCGBPQ9Y6R7 5405 aaPredicted RBP6.88□□□□□ -1.31
COPS3-214ENST00000577246 TRBV20-1A0A075B6N2 111 aa6.87□□□□□ -1.31
COPS3-214ENST00000577246 COPS9Q8WXC6 57 aa6.86□□□□□ -1.31
COPS3-214ENST00000577246 YPEL4Q96NS1 127 aa6.86□□□□□ -1.31
COPS3-214ENST00000577246 ZNF815PA8K554 130 aa6.84□□□□□ -1.31
COPS3-214ENST00000577246 LINC00310P59036 64 aa6.83□□□□□ -1.32
COPS3-214ENST00000577246 Q6JHZ5 121 aa6.83□□□□□ -1.32
COPS3-214ENST00000577246 KRTAP19-1Q8IUB9 90 aa6.83□□□□□ -1.32
COPS3-214ENST00000577246 A6NDN8 102 aa6.82□□□□□ -1.32
COPS3-214ENST00000577246 TRGC2P03986 189 aa6.82□□□□□ -1.32
COPS3-214ENST00000577246 TRBV7-7A0A0K0K1E9 115 aa6.81□□□□□ -1.32
COPS3-214ENST00000577246 CLEC2BQ92478 149 aa6.81□□□□□ -1.32
COPS3-214ENST00000577246 Q96NJ1 140 aa6.8□□□□□ -1.32
COPS3-214ENST00000577246 LINC00846Q9NV44 126 aa6.8□□□□□ -1.32
COPS3-214ENST00000577246 TRAV13-2A0A0B4J235 113 aa6.79□□□□□ -1.32
COPS3-214ENST00000577246 MT2AP02795 61 aa6.78□□□□□ -1.32
COPS3-214ENST00000577246 IFITM1P13164 125 aa6.78□□□□□ -1.32
COPS3-214ENST00000577246 SCGB1D4Q6XE38 83 aa6.78□□□□□ -1.32
COPS3-214ENST00000577246 SYS1-DBNDD2H3BUS1 97 aa6.77□□□□□ -1.33
COPS3-214ENST00000577246 SLC7A5P1Q8MH63 180 aa6.77□□□□□ -1.33
COPS3-214ENST00000577246 LST1O00453 97 aa6.76□□□□□ -1.33
COPS3-214ENST00000577246 VAMP3Q15836 100 aa6.76□□□□□ -1.33
COPS3-214ENST00000577246 IGFL1Q6UW32 110 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms