RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 MUSTN1Q8IVN3 82 aa6.72□□□□□ -1.33
CHD3-216ENST00000573936 HIST1H4GQ99525 98 aa6.72□□□□□ -1.33
CHD3-216ENST00000573936 H0Y9J4 135 aa6.71□□□□□ -1.34
CHD3-216ENST00000573936 UBE2AP49459 152 aa6.71□□□□□ -1.34
CHD3-216ENST00000573936 PPDPFQ9H3Y8 114 aa6.71□□□□□ -1.34
CHD3-216ENST00000573936 PRYO14603 147 aa6.7□□□□□ -1.34
CHD3-216ENST00000573936 TAL2Q16559 108 aa6.7□□□□□ -1.34
CHD3-216ENST00000573936 TMEM126AQ9H061 195 aa6.7□□□□□ -1.34
CHD3-216ENST00000573936 CBY1Q9Y3M2 126 aa6.7□□□□□ -1.34
CHD3-216ENST00000573936 LRP2P98164 4655 aa6.7□□□□□ -1.34
CHD3-216ENST00000573936 DDTP30046 118 aa6.69□□□□□ -1.34
CHD3-216ENST00000573936 HSD52Q0P140 79 aa6.69□□□□□ -1.34
CHD3-216ENST00000573936 S100A7L2Q5SY68 101 aa6.69□□□□□ -1.34
CHD3-216ENST00000573936 FAM19A1Q7Z5A9 133 aa6.69□□□□□ -1.34
CHD3-216ENST00000573936 LINC01600Q96MT4 127 aa6.69□□□□□ -1.34
CHD3-216ENST00000573936 KCNQ1DNQ9H478 68 aa6.69□□□□□ -1.34
CHD3-216ENST00000573936 TRBV10-3A0A0K0K1G6 114 aa6.68□□□□□ -1.34
CHD3-216ENST00000573936 CTAG1AP78358 180 aa6.68□□□□□ -1.34
CHD3-216ENST00000573936 CEND1Q8N111 149 aa6.68□□□□□ -1.34
CHD3-216ENST00000573936 A4D1N5 150 aa6.66□□□□□ -1.34
CHD3-216ENST00000573936 IGLV6-57P01721 117 aa6.66□□□□□ -1.34
CHD3-216ENST00000573936 MT1HL1P0DM35 61 aa6.66□□□□□ -1.34
CHD3-216ENST00000573936 FXYD2P54710 66 aa6.66□□□□□ -1.34
CHD3-216ENST00000573936 KRTAP13-1Q8IUC0 172 aa6.66□□□□□ -1.34
CHD3-216ENST00000573936 LINC00337Q8N6G1 96 aa6.66□□□□□ -1.34
CHD3-216ENST00000573936 ETDCA0A1B0GVM5 59 aa6.65□□□□□ -1.34
CHD3-216ENST00000573936 SPRR1AP35321 89 aa6.65□□□□□ -1.34
CHD3-216ENST00000573936 RNF213Q63HN8 5207 aa6.65□□□□□ -1.35
CHD3-216ENST00000573936 OR13C6PQ8NH95 151 aa6.64□□□□□ -1.35
CHD3-216ENST00000573936 TRAV23DV6A0A075B6W5 121 aa6.63□□□□□ -1.35
CHD3-216ENST00000573936 LOC100996750A0A140TA64 210 aa6.63□□□□□ -1.35
CHD3-216ENST00000573936 HINT1P49773 126 aaPredicted RBP6.63□□□□□ -1.35
CHD3-216ENST00000573936 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
CHD3-216ENST00000573936 PRLHP81277 87 aa6.63□□□□□ -1.35
CHD3-216ENST00000573936 BVES-AS1Q5T3Y7 98 aa6.63□□□□□ -1.35
CHD3-216ENST00000573936 KRTAP4-6Q9BYQ5 205 aa6.63□□□□□ -1.35
CHD3-216ENST00000573936 TMEM238LA0A1B0GVL6 79 aa6.62□□□□□ -1.35
CHD3-216ENST00000573936 A6NJY4 79 aa6.62□□□□□ -1.35
CHD3-216ENST00000573936 PCP4L1A6NKN8 68 aa6.62□□□□□ -1.35
CHD3-216ENST00000573936 KRTAP4-16G5E9R7 235 aaPredicted RBP6.62□□□□□ -1.35
CHD3-216ENST00000573936 M0R143 59 aa6.62□□□□□ -1.35
CHD3-216ENST00000573936 CFC1BP0CG36 223 aa6.62□□□□□ -1.35
CHD3-216ENST00000573936 CFC1P0CG37 223 aa6.62□□□□□ -1.35
CHD3-216ENST00000573936 ZNF73O43830 326 aaPredicted RBP6.61□□□□□ -1.35
CHD3-216ENST00000573936 KRTAP1-4P0C5Y4 121 aa6.61□□□□□ -1.35
CHD3-216ENST00000573936 RPL13AP40429 203 aaKnown RBP6.61□□□□□ -1.35
CHD3-216ENST00000573936 HIGD2AQ9BW72 106 aa6.61□□□□□ -1.35
CHD3-216ENST00000573936 NHP2Q9NX24 153 aaKnown RBP6.61□□□□□ -1.35
CHD3-216ENST00000573936 TRAV13-2A0A0B4J235 113 aa6.6□□□□□ -1.35
CHD3-216ENST00000573936 A0A0B4J2C4 111 aa6.6□□□□□ -1.35
CHD3-216ENST00000573936 B5MCH6 92 aa6.6□□□□□ -1.35
CHD3-216ENST00000573936 ZNF706Q9Y5V0 76 aaPredicted RBP6.6□□□□□ -1.35
CHD3-216ENST00000573936 A0A1B0GWB2 263 aa6.59□□□□□ -1.35
CHD3-216ENST00000573936 A6NDN8 102 aa6.59□□□□□ -1.35
CHD3-216ENST00000573936 K7ERJ3 54 aa6.59□□□□□ -1.35
CHD3-216ENST00000573936 PRR26Q8N8Z3 221 aa6.59□□□□□ -1.35
CHD3-216ENST00000573936 RAB37Q96AX2 223 aa6.59□□□□□ -1.35
CHD3-216ENST00000573936 CRYGAP11844 174 aa6.58□□□□□ -1.36
CHD3-216ENST00000573936 BATFQ16520 125 aa6.58□□□□□ -1.36
CHD3-216ENST00000573936 FAM229BQ4G0N7 80 aa6.58□□□□□ -1.36
CHD3-216ENST00000573936 Q6ZRX8 168 aa6.58□□□□□ -1.36
CHD3-216ENST00000573936 SMCR5Q8TEV8 140 aa6.58□□□□□ -1.36
CHD3-216ENST00000573936 PRO1854Q9UHT4 67 aa6.57□□□□□ -1.36
CHD3-216ENST00000573936 SNHG12Q9BXW3 62 aa6.56□□□□□ -1.36
CHD3-216ENST00000573936 TRBV7-6A0A0J9YX20 115 aa6.55□□□□□ -1.36
CHD3-216ENST00000573936 H7C2G1 150 aa6.55□□□□□ -1.36
CHD3-216ENST00000573936 COX7BP24311 80 aa6.55□□□□□ -1.36
CHD3-216ENST00000573936 C6orf99Q4VX62 202 aa6.55□□□□□ -1.36
CHD3-216ENST00000573936 SMIM11BQ8TCY0 68 aa6.55□□□□□ -1.36
CHD3-216ENST00000573936 SPRR4Q96PI1 79 aa6.55□□□□□ -1.36
CHD3-216ENST00000573936 LCE2BO14633 110 aa6.54□□□□□ -1.36
CHD3-216ENST00000573936 TYMSOSQ8TAI1 123 aa6.54□□□□□ -1.36
CHD3-216ENST00000573936 Q9BRP9 147 aa6.54□□□□□ -1.36
CHD3-216ENST00000573936 ANAPC11Q9NYG5 84 aa6.54□□□□□ -1.36
CHD3-216ENST00000573936 DHRS4-AS1Q9P1J3 65 aa6.54□□□□□ -1.36
CHD3-216ENST00000573936 A0A087X002 238 aa6.53□□□□□ -1.36
CHD3-216ENST00000573936 ELOF1P60002 83 aaKnown RBP6.53□□□□□ -1.36
CHD3-216ENST00000573936 TSPAN13O95857 204 aa6.52□□□□□ -1.37
CHD3-216ENST00000573936 Q1RN00 199 aa6.52□□□□□ -1.37
CHD3-216ENST00000573936 ERC2-IT1O76042 136 aa6.51□□□□□ -1.37
CHD3-216ENST00000573936 VAMP3Q15836 100 aa6.51□□□□□ -1.37
CHD3-216ENST00000573936 LINC00483Q53H64 154 aa6.51□□□□□ -1.37
CHD3-216ENST00000573936 KRTAP13-2Q52LG2 175 aa6.5□□□□□ -1.37
CHD3-216ENST00000573936 GAGE2AQ6NT46 116 aa6.5□□□□□ -1.37
CHD3-216ENST00000573936 TAX1BP3O14907 124 aa6.49□□□□□ -1.37
CHD3-216ENST00000573936 TRIAP1O43715 76 aa6.49□□□□□ -1.37
CHD3-216ENST00000573936 LPAP08519 4548 aa6.48□□□□□ -1.37
CHD3-216ENST00000573936 COL5A1-AS1Q5SY13 56 aa6.48□□□□□ -1.37
CHD3-216ENST00000573936 NAA38Q9BRA0 125 aaKnown RBP6.48□□□□□ -1.37
CHD3-216ENST00000573936 SLC25A20O43772 301 aa6.47□□□□□ -1.37
CHD3-216ENST00000573936 PSMB2P49721 201 aa6.47□□□□□ -1.37
CHD3-216ENST00000573936 C3orf22Q8N5N4 141 aa6.47□□□□□ -1.37
CHD3-216ENST00000573936 ST20-AS1Q8NBB2 130 aa6.46□□□□□ -1.38
CHD3-216ENST00000573936 C9orf118A6NHY6 69 aa6.45□□□□□ -1.38
CHD3-216ENST00000573936 H3BUT2 72 aa6.45□□□□□ -1.38
CHD3-216ENST00000573936 SPRR1BP22528 89 aa6.45□□□□□ -1.38
CHD3-216ENST00000573936 SSBP3-AS1Q7Z2R9 100 aa6.45□□□□□ -1.38
CHD3-216ENST00000573936 LINC00304Q8N9R0 145 aa6.45□□□□□ -1.38
CHD3-216ENST00000573936 KRTAP9-2Q9BYQ4 174 aa6.45□□□□□ -1.38
CHD3-216ENST00000573936 H0YGX0 51 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms