RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 LINC00337Q8N6G1 96 aa13.03□□□□□ -0.32
UBFD1-210ENST00000571064 HIST1H4GQ99525 98 aa13.02□□□□□ -0.33
UBFD1-210ENST00000571064 LPAP08519 4548 aa13.01□□□□□ -0.33
UBFD1-210ENST00000571064 PRYO14603 147 aa13.01□□□□□ -0.33
UBFD1-210ENST00000571064 S100A7L2Q5SY68 101 aa13.01□□□□□ -0.33
UBFD1-210ENST00000571064 SPRR1AP35321 89 aa13□□□□□ -0.33
UBFD1-210ENST00000571064 KRTAP13-1Q8IUC0 172 aa13□□□□□ -0.33
UBFD1-210ENST00000571064 LINC00518Q8N0U6 118 aa13□□□□□ -0.33
UBFD1-210ENST00000571064 C12orf57Q99622 126 aa13□□□□□ -0.33
UBFD1-210ENST00000571064 KRTAP9-2Q9BYQ4 174 aa13□□□□□ -0.33
UBFD1-210ENST00000571064 A4D1N5 150 aa12.99□□□□□ -0.33
UBFD1-210ENST00000571064 SPINK6Q6UWN8 80 aa12.99□□□□□ -0.33
UBFD1-210ENST00000571064 KRTAP4-16G5E9R7 235 aaPredicted RBP12.98□□□□□ -0.33
UBFD1-210ENST00000571064 ZNF861PO60384 105 aa12.98□□□□□ -0.33
UBFD1-210ENST00000571064 OR13C6PQ8NH95 151 aa12.98□□□□□ -0.33
UBFD1-210ENST00000571064 UQCR10Q9UDW1 63 aa12.98□□□□□ -0.33
UBFD1-210ENST00000571064 PRO1933Q9H354 126 aa12.97□□□□□ -0.33
UBFD1-210ENST00000571064 FAM19A1Q7Z5A9 133 aa12.96□□□□□ -0.33
UBFD1-210ENST00000571064 TRAV23DV6A0A075B6W5 121 aa12.95□□□□□ -0.34
UBFD1-210ENST00000571064 PRLHP81277 87 aa12.95□□□□□ -0.34
UBFD1-210ENST00000571064 UBE2AP49459 152 aa12.94□□□□□ -0.34
UBFD1-210ENST00000571064 TAL2Q16559 108 aa12.94□□□□□ -0.34
UBFD1-210ENST00000571064 RPL28P46779 137 aaKnown RBP12.93□□□□□ -0.34
UBFD1-210ENST00000571064 H0Y9J4 135 aa12.92□□□□□ -0.34
UBFD1-210ENST00000571064 CEND1Q8N111 149 aa12.92□□□□□ -0.34
UBFD1-210ENST00000571064 DIRC1Q969H9 104 aa12.92□□□□□ -0.34
UBFD1-210ENST00000571064 A6NDN8 102 aa12.91□□□□□ -0.34
UBFD1-210ENST00000571064 B5MCH6 92 aa12.91□□□□□ -0.34
UBFD1-210ENST00000571064 TSTD3H0UI37 97 aa12.9□□□□□ -0.34
UBFD1-210ENST00000571064 ZNF73O43830 326 aaPredicted RBP12.9□□□□□ -0.34
UBFD1-210ENST00000571064 TRAV13-2A0A0B4J235 113 aa12.89□□□□□ -0.35
UBFD1-210ENST00000571064 ETDCA0A1B0GVM5 59 aa12.89□□□□□ -0.35
UBFD1-210ENST00000571064 FXYD2P54710 66 aa12.88□□□□□ -0.35
UBFD1-210ENST00000571064 HSD52Q0P140 79 aa12.88□□□□□ -0.35
UBFD1-210ENST00000571064 CFC1BP0CG36 223 aa12.87□□□□□ -0.35
UBFD1-210ENST00000571064 CFC1P0CG37 223 aa12.87□□□□□ -0.35
UBFD1-210ENST00000571064 CBY1Q9Y3M2 126 aa12.86□□□□□ -0.35
UBFD1-210ENST00000571064 KRTAP1-4P0C5Y4 121 aa12.84□□□□□ -0.35
UBFD1-210ENST00000571064 C6orf99Q4VX62 202 aa12.84□□□□□ -0.35
UBFD1-210ENST00000571064 Q6ZRX8 168 aa12.84□□□□□ -0.35
UBFD1-210ENST00000571064 SMIM11BQ8TCY0 68 aa12.84□□□□□ -0.35
UBFD1-210ENST00000571064 SMCR5Q8TEV8 140 aa12.84□□□□□ -0.35
UBFD1-210ENST00000571064 Q9BRP9 147 aa12.84□□□□□ -0.35
UBFD1-210ENST00000571064 HIGD2AQ9BW72 106 aa12.84□□□□□ -0.35
UBFD1-210ENST00000571064 RPL13AP40429 203 aaKnown RBP12.82□□□□□ -0.36
UBFD1-210ENST00000571064 A0A0B4J2C4 111 aa12.81□□□□□ -0.36
UBFD1-210ENST00000571064 MUC2Q02817 5179 aa12.8□□□□□ -0.36
UBFD1-210ENST00000571064 ERC2-IT1O76042 136 aa12.8□□□□□ -0.36
UBFD1-210ENST00000571064 KRTAP9-6A0A140TA67 174 aa12.79□□□□□ -0.36
UBFD1-210ENST00000571064 TMEM238LA0A1B0GVL6 79 aa12.78□□□□□ -0.36
UBFD1-210ENST00000571064 A6NJY4 79 aa12.78□□□□□ -0.36
UBFD1-210ENST00000571064 ELOF1P60002 83 aaKnown RBP12.78□□□□□ -0.36
UBFD1-210ENST00000571064 RAB37Q96AX2 223 aa12.78□□□□□ -0.36
UBFD1-210ENST00000571064 COX7BP24311 80 aa12.77□□□□□ -0.37
UBFD1-210ENST00000571064 HINT1P49773 126 aaPredicted RBP12.77□□□□□ -0.37
UBFD1-210ENST00000571064 CTAG1AP78358 180 aa12.77□□□□□ -0.37
UBFD1-210ENST00000571064 BVES-AS1Q5T3Y7 98 aa12.77□□□□□ -0.37
UBFD1-210ENST00000571064 TRBV7-6A0A0J9YX20 115 aa12.76□□□□□ -0.37
UBFD1-210ENST00000571064 ANAPC11Q9NYG5 84 aa12.75□□□□□ -0.37
UBFD1-210ENST00000571064 H7C2G1 150 aa12.74□□□□□ -0.37
UBFD1-210ENST00000571064 NHP2Q9NX24 153 aaKnown RBP12.74□□□□□ -0.37
UBFD1-210ENST00000571064 PRO1854Q9UHT4 67 aa12.74□□□□□ -0.37
UBFD1-210ENST00000571064 A0A1B0GWB2 263 aa12.73□□□□□ -0.37
UBFD1-210ENST00000571064 K7ERJ3 54 aa12.73□□□□□ -0.37
UBFD1-210ENST00000571064 SPRR4Q96PI1 79 aa12.73□□□□□ -0.37
UBFD1-210ENST00000571064 PRR26Q8N8Z3 221 aa12.72□□□□□ -0.37
UBFD1-210ENST00000571064 M0R143 59 aa12.7□□□□□ -0.38
UBFD1-210ENST00000571064 ST20-AS1Q8NBB2 130 aa12.69□□□□□ -0.38
UBFD1-210ENST00000571064 DHRS4-AS1Q9P1J3 65 aa12.69□□□□□ -0.38
UBFD1-210ENST00000571064 A0A087X002 238 aa12.68□□□□□ -0.38
UBFD1-210ENST00000571064 A0A0U1RQV1 116 aa12.68□□□□□ -0.38
UBFD1-210ENST00000571064 ZNF706Q9Y5V0 76 aaPredicted RBP12.66□□□□□ -0.38
UBFD1-210ENST00000571064 VAMP3Q15836 100 aa12.65□□□□□ -0.38
UBFD1-210ENST00000571064 FAM229BQ4G0N7 80 aa12.65□□□□□ -0.38
UBFD1-210ENST00000571064 LINC00483Q53H64 154 aa12.65□□□□□ -0.38
UBFD1-210ENST00000571064 Q1RN00 199 aa12.64□□□□□ -0.39
UBFD1-210ENST00000571064 KRTAP13-2Q52LG2 175 aa12.64□□□□□ -0.39
UBFD1-210ENST00000571064 LCE2AQ5TA79 106 aaPredicted RBP12.64□□□□□ -0.39
UBFD1-210ENST00000571064 GAGE2AQ6NT46 116 aa12.64□□□□□ -0.39
UBFD1-210ENST00000571064 LINC00575Q6W349 94 aa12.64□□□□□ -0.39
UBFD1-210ENST00000571064 CRYGAP11844 174 aa12.62□□□□□ -0.39
UBFD1-210ENST00000571064 TSPAN13O95857 204 aa12.61□□□□□ -0.39
UBFD1-210ENST00000571064 PRR4Q16378 134 aa12.61□□□□□ -0.39
UBFD1-210ENST00000571064 TRIAP1O43715 76 aa12.59□□□□□ -0.39
UBFD1-210ENST00000571064 FAT4Q6V0I7 4981 aa12.58□□□□□ -0.4
UBFD1-210ENST00000571064 C3orf22Q8N5N4 141 aa12.58□□□□□ -0.4
UBFD1-210ENST00000571064 FAM218AQ96MZ4 157 aa12.58□□□□□ -0.4
UBFD1-210ENST00000571064 SPRR1BP22528 89 aa12.57□□□□□ -0.4
UBFD1-210ENST00000571064 LINC01547P58512 204 aaPredicted RBP12.57□□□□□ -0.4
UBFD1-210ENST00000571064 hADV29S1A0JD25 119 aa12.56□□□□□ -0.4
UBFD1-210ENST00000571064 H0YGX0 51 aa12.56□□□□□ -0.4
UBFD1-210ENST00000571064 SLC25A20O43772 301 aa12.55□□□□□ -0.4
UBFD1-210ENST00000571064 IGLV5-48A0A075B6I7 105 aa12.54□□□□□ -0.4
UBFD1-210ENST00000571064 DEFB105AQ8NG35 78 aa12.54□□□□□ -0.4
UBFD1-210ENST00000571064 TYMSOSQ8TAI1 123 aa12.54□□□□□ -0.4
UBFD1-210ENST00000571064 PSMB2P49721 201 aa12.53□□□□□ -0.4
UBFD1-210ENST00000571064 BATFQ16520 125 aa12.53□□□□□ -0.4
UBFD1-210ENST00000571064 Q6ZQY7 126 aa12.51□□□□□ -0.41
UBFD1-210ENST00000571064 Q8N377 158 aa12.51□□□□□ -0.41
UBFD1-210ENST00000571064 TEX49A0A1B0GTD5 131 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms