RNA–Protein interactions for RNA: ENST00000569634.1

TNRC6A-218, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-218ENST00000569634 POLR2KP53803 58 aaKnown RBP1.58□□□□□ -2.16
TNRC6A-218ENST00000569634 LINC00575Q6W349 94 aa1.58□□□□□ -2.16
TNRC6A-218ENST00000569634 CDKN2A-AS1Q9UH64 79 aa1.58□□□□□ -2.16
TNRC6A-218ENST00000569634 GVQW2A0A096LPI5 108 aaPredicted RBP1.57□□□□□ -2.16
TNRC6A-218ENST00000569634 IGKV2-24A0A0C4DH68 120 aa1.57□□□□□ -2.16
TNRC6A-218ENST00000569634 G3V318 75 aa1.57□□□□□ -2.16
TNRC6A-218ENST00000569634 CACNA1CQ13936 2221 aa1.56□□□□□ -2.16
TNRC6A-218ENST00000569634 K7EQZ3 153 aa1.56□□□□□ -2.16
TNRC6A-218ENST00000569634 Q6ZRN7 208 aaPredicted RBP1.56□□□□□ -2.16
TNRC6A-218ENST00000569634 TTTY10Q9BZA0 68 aa1.56□□□□□ -2.16
TNRC6A-218ENST00000569634 F5P12259 2224 aa1.56□□□□□ -2.16
TNRC6A-218ENST00000569634 KNTC1P50748 2209 aa1.56□□□□□ -2.16
TNRC6A-218ENST00000569634 FCGBPQ9Y6R7 5405 aaPredicted RBP1.55□□□□□ -2.16
TNRC6A-218ENST00000569634 CCL22O00626 93 aa1.55□□□□□ -2.16
TNRC6A-218ENST00000569634 PRR9Q5T870 116 aa1.55□□□□□ -2.16
TNRC6A-218ENST00000569634 USMG5Q96IX5 58 aa1.55□□□□□ -2.16
TNRC6A-218ENST00000569634 CRIPTQ9P021 101 aa1.55□□□□□ -2.16
TNRC6A-218ENST00000569634 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
TNRC6A-218ENST00000569634 SHANK1Q9Y566 2161 aa1.54□□□□□ -2.16
TNRC6A-218ENST00000569634 PDE4DIPQ5VU43 2346 aa1.54□□□□□ -2.16
TNRC6A-218ENST00000569634 IGLV5-48A0A075B6I7 105 aa1.54□□□□□ -2.16
TNRC6A-218ENST00000569634 PRCDQ00LT1 54 aa1.54□□□□□ -2.16
TNRC6A-218ENST00000569634 ANKRD17O75179 2603 aaKnown RBP1.53□□□□□ -2.16
TNRC6A-218ENST00000569634 BPTFQ12830 3046 aa1.53□□□□□ -2.16
TNRC6A-218ENST00000569634 KRTAP13-2Q52LG2 175 aa1.52□□□□□ -2.17
TNRC6A-218ENST00000569634 MINOS1Q5TGZ0 78 aa1.52□□□□□ -2.17
TNRC6A-218ENST00000569634 C6orf48Q9UBA6 75 aa1.52□□□□□ -2.17
TNRC6A-218ENST00000569634 GPR179Q6PRD1 2367 aa1.51□□□□□ -2.17
TNRC6A-218ENST00000569634 RPL37P61927 97 aaKnown RBP1.51□□□□□ -2.17
TNRC6A-218ENST00000569634 UBE2DNLQ8IWF7 75 aa1.51□□□□□ -2.17
TNRC6A-218ENST00000569634 PRO3102Q9H379 93 aa1.51□□□□□ -2.17
TNRC6A-218ENST00000569634 URB1O60287 2271 aaKnown RBP1.5□□□□□ -2.17
TNRC6A-218ENST00000569634 DEFB131AP59861 70 aa1.5□□□□□ -2.17
TNRC6A-218ENST00000569634 UNQ6190/PRO20217Q6UXQ8 127 aa1.5□□□□□ -2.17
TNRC6A-218ENST00000569634 BRD3OSQ6XYD6 125 aa1.5□□□□□ -2.17
TNRC6A-218ENST00000569634 DEFB123Q8N688 67 aa1.5□□□□□ -2.17
TNRC6A-218ENST00000569634 MRPL34Q9BQ48 92 aaKnown RBP1.5□□□□□ -2.17
TNRC6A-218ENST00000569634 FBN3Q75N90 2809 aa1.49□□□□□ -2.17
TNRC6A-218ENST00000569634 RPL39P62891 51 aaKnown RBP1.49□□□□□ -2.17
TNRC6A-218ENST00000569634 PIGYQ3MUY2 71 aa1.49□□□□□ -2.17
TNRC6A-218ENST00000569634 FN1P02751 2386 aaKnown RBP1.49□□□□□ -2.17
TNRC6A-218ENST00000569634 CADP27708 2225 aa1.48□□□□□ -2.17
TNRC6A-218ENST00000569634 PRB1P04280 392 aa1.48□□□□□ -2.17
TNRC6A-218ENST00000569634 RPL39LQ96EH5 51 aaKnown RBP1.48□□□□□ -2.17
TNRC6A-218ENST00000569634 TECTAO75443 2155 aa1.48□□□□□ -2.17
TNRC6A-218ENST00000569634 SORL1Q92673 2214 aa1.47□□□□□ -2.17
TNRC6A-218ENST00000569634 CNOT1A5YKK6 2376 aaKnown RBP1.47□□□□□ -2.17
TNRC6A-218ENST00000569634 H3BSH0 61 aa1.47□□□□□ -2.17
TNRC6A-218ENST00000569634 I3L2K1 104 aa1.47□□□□□ -2.17
TNRC6A-218ENST00000569634 M0QY20 66 aa1.47□□□□□ -2.17
TNRC6A-218ENST00000569634 ABCA1O95477 2261 aa1.46□□□□□ -2.18
TNRC6A-218ENST00000569634 AHCTF1Q8WYP5 2266 aa1.46□□□□□ -2.18
TNRC6A-218ENST00000569634 LYNX1P0DP58 116 aa1.46□□□□□ -2.18
TNRC6A-218ENST00000569634 CACNA1EQ15878 2313 aa1.46□□□□□ -2.18
TNRC6A-218ENST00000569634 H0YAA0 97 aa1.45□□□□□ -2.18
TNRC6A-218ENST00000569634 RPS27P42677 84 aaKnown RBP1.45□□□□□ -2.18
TNRC6A-218ENST00000569634 PRB3Q04118 309 aaPredicted RBP1.45□□□□□ -2.18
TNRC6A-218ENST00000569634 TMEM167AQ8TBQ9 72 aa1.45□□□□□ -2.18
TNRC6A-218ENST00000569634 H3BUA1 57 aa1.44□□□□□ -2.18
TNRC6A-218ENST00000569634 DEFB109BQ30KR1 87 aa1.44□□□□□ -2.18
TNRC6A-218ENST00000569634 PCOTHQ58A44 107 aa1.44□□□□□ -2.18
TNRC6A-218ENST00000569634 SPINK9Q5DT21 86 aa1.44□□□□□ -2.18
TNRC6A-218ENST00000569634 DEFB106AQ8N104 65 aa1.44□□□□□ -2.18
TNRC6A-218ENST00000569634 ASXL3Q9C0F0 2248 aa1.44□□□□□ -2.18
TNRC6A-218ENST00000569634 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.43□□□□□ -2.185e-7■■■□□ 16.7
TNRC6A-218ENST00000569634 WFDC10BQ8IUB3 73 aa1.43□□□□□ -2.18
TNRC6A-218ENST00000569634 WFDC13Q8IUB5 93 aa1.43□□□□□ -2.18
TNRC6A-218ENST00000569634 ASCC3Q8N3C0 2202 aaKnown RBP1.43□□□□□ -2.18
TNRC6A-218ENST00000569634 MUC6Q6W4X9 2439 aa1.42□□□□□ -2.18
TNRC6A-218ENST00000569634 KNL1Q8NG31 2342 aa1.42□□□□□ -2.18
TNRC6A-218ENST00000569634 PTPRQQ9UMZ3 2332 aa1.42□□□□□ -2.18
TNRC6A-218ENST00000569634 K7EIM0 57 aa1.42□□□□□ -2.18
TNRC6A-218ENST00000569634 H1FX-AS1Q4G0G2 97 aa1.42□□□□□ -2.18
TNRC6A-218ENST00000569634 Q6ZSA8 131 aa1.42□□□□□ -2.18
TNRC6A-218ENST00000569634 TPRP12270 2363 aaKnown RBP1.42□□□□□ -2.18
TNRC6A-218ENST00000569634 ICE1Q9Y2F5 2266 aa1.4□□□□□ -2.19
TNRC6A-218ENST00000569634 DOPEY2Q9Y3R5 2298 aa1.4□□□□□ -2.19
TNRC6A-218ENST00000569634 MMP24-AS1A0A0U1RRL7 71 aa1.4□□□□□ -2.19
TNRC6A-218ENST00000569634 COX6A2Q02221 97 aa1.4□□□□□ -2.19
TNRC6A-218ENST00000569634 CACNA1BQ00975 2339 aa1.4□□□□□ -2.19
TNRC6A-218ENST00000569634 PLCE1Q9P212 2302 aa1.4□□□□□ -2.19
TNRC6A-218ENST00000569634 USF3Q68DE3 2245 aa1.39□□□□□ -2.19
TNRC6A-218ENST00000569634 K7EIL1 84 aa1.39□□□□□ -2.19
TNRC6A-218ENST00000569634 WT1-ASQ06250 92 aa1.39□□□□□ -2.19
TNRC6A-218ENST00000569634 LEAP2Q969E1 77 aa1.39□□□□□ -2.19
TNRC6A-218ENST00000569634 WNK2Q9Y3S1 2297 aa1.38□□□□□ -2.19
TNRC6A-218ENST00000569634 FAM208BQ5VWN6 2430 aa1.38□□□□□ -2.19
TNRC6A-218ENST00000569634 KRTAP13-4Q3LI77 160 aa1.38□□□□□ -2.19
TNRC6A-218ENST00000569634 Q5VSD8 79 aa1.38□□□□□ -2.19
TNRC6A-218ENST00000569634 KAAG1Q9UBP8 84 aa1.38□□□□□ -2.19
TNRC6A-218ENST00000569634 DEFB130BP0DP73 79 aa1.37□□□□□ -2.19
TNRC6A-218ENST00000569634 DEFB130AP0DP74 79 aa1.37□□□□□ -2.19
TNRC6A-218ENST00000569634 KLK9Q2XQG4 91 aa1.37□□□□□ -2.19
TNRC6A-218ENST00000569634 CNTRLQ7Z7A1 2325 aa1.36□□□□□ -2.19
TNRC6A-218ENST00000569634 NAV3Q8IVL0 2385 aa1.36□□□□□ -2.19
TNRC6A-218ENST00000569634 CACNA1GO43497 2377 aa1.35□□□□□ -2.19
TNRC6A-218ENST00000569634 DEFB103AP81534 67 aa1.35□□□□□ -2.19
TNRC6A-218ENST00000569634 TOMM7Q9P0U1 55 aa1.35□□□□□ -2.19
TNRC6A-218ENST00000569634 RPL39P5Q59GN2 51 aa1.34□□□□□ -2.19
TNRC6A-218ENST00000569634 CLPSL2Q6UWE3 100 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms